RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 PLAAQ9Y263 795 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 AXIN2Q9Y2T1 843 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 LEMD3Q9Y2U8 911 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 BCL9LQ86UU0 1499 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 MYH13Q9UKX3 1938 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 TRAPPC3O43617 180 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 ELF3P78545 371 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-201ENST00000261443 ICA1Q05084 483 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 ADCY2Q08462 1091 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 MYO1EQ12965 1108 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 GRIPAP1Q4V328 841 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 AMOTQ4VCS5 1084 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 LRRC24Q50LG9 513 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 LACTB2Q53H82 288 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-201ENST00000261443 ZNF658Q5TYW1 1059 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-201ENST00000261443 MREGQ8N565 214 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 C1orf131Q8NDD1 294 aaKnown RBP8.02□□□□□ -1.13
CSDE1-201ENST00000261443 CUL5Q93034 780 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 PCMTD1Q96MG8 357 aaPredicted RBP8.02□□□□□ -1.13
CSDE1-201ENST00000261443 ALS2CR12Q96Q35 445 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 SPEF2Q9C093 1822 aa8.02□□□□□ -1.13
CSDE1-201ENST00000261443 ZSCAN5CA6NGD5 496 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 IFIT3O14879 490 aaKnown RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 IRF6O14896 467 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 CLSTN1O94985 981 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 DNM2P50570 870 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 PPP1R7Q15435 360 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 ODF2Q5BJF6 829 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 HIBCHQ6NVY1 386 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 TTLL7Q6ZT98 887 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 KRT26Q7Z3Y9 468 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 TAX1BP1Q86VP1 789 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 SGMS1Q86VZ5 419 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 IRF2BP1Q8IU81 584 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 ZNF507Q8TCN5 953 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 IP6K1Q92551 441 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 SAAL1Q96ER3 474 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 STAMBPL1Q96FJ0 436 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 IFIH1Q9BYX4 1025 aaKnown RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 SH2D4AQ9H788 454 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 TMBIM4Q9HC24 238 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 GDF3Q9NR23 364 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 MAGEC2Q9UBF1 373 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 AFDNP55196 1824 aaKnown RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 XDHP47989 1333 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 TRIM49BA6NDI0 452 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 B4DLN1 442 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 GCOM1H8Y6P7 765 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 NCK2O43639 380 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 DNAJC8O75937 253 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 MYZAPP0CAP1 466 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 PRCPP42785 496 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 ZBED6P86452 979 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 P3H4Q92791 437 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 FERMT2Q96AC1 680 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 NUP58Q9BVL2 599 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 GDAQ9Y2T3 454 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 SCN11AQ9UI33 1791 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 PDS5AQ29RF7 1337 aaKnown RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 FAM205CA6NFA0 338 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 BACH1O14867 736 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 ZNF263O14978 683 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 DEXIO95424 95 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 TMOD1P28289 359 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 FOXO4P98177 505 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 SLC39A6Q13433 755 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 CDC37Q16543 378 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 CFAP221Q4G0U5 840 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 GKAP1Q5VSY0 366 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 FAM43BQ6ZT52 329 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 CPLX4Q7Z7G2 160 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 CMTR1Q8N1G2 835 aaKnown RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 WHAMMQ8TF30 809 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 TATDN2Q93075 761 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 MS4A14Q96JA4 679 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 ZNF594Q96JF6 807 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 CALR3Q96L12 384 aaKnown RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 SPAG5Q96R06 1193 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 KDM4CQ9H3R0 1056 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 RMND1Q9NWS8 449 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 ETAA1Q9NY74 926 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 PHF8Q9UPP1 1060 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 IQSEC3Q9UPP2 1182 aaPredicted RBP8.01□□□□□ -1.13
CSDE1-201ENST00000261443 TRPC6Q9Y210 931 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 PCDHA13Q9Y5I0 950 aa8.01□□□□□ -1.13
CSDE1-201ENST00000261443 ANKRD33BA6NCL7 494 aa8□□□□□ -1.13
CSDE1-201ENST00000261443 EYA2O00167 538 aa8□□□□□ -1.13
CSDE1-201ENST00000261443 GTPBP6O43824 516 aaPredicted RBP8□□□□□ -1.13
CSDE1-201ENST00000261443 EEF1GP26641 437 aaKnown RBP8□□□□□ -1.13
CSDE1-201ENST00000261443 ZAP70P43403 619 aa8□□□□□ -1.13
CSDE1-201ENST00000261443 KLK7P49862 253 aa8□□□□□ -1.13
CSDE1-201ENST00000261443 KCNB1Q14721 858 aa8□□□□□ -1.13
CSDE1-201ENST00000261443 RTN1Q16799 776 aa8□□□□□ -1.13
CSDE1-201ENST00000261443 CAPRIN2Q6IMN6 1127 aaKnown RBP8□□□□□ -1.13
CSDE1-201ENST00000261443 BZW1Q7L1Q6 419 aaKnown RBP8□□□□□ -1.13
CSDE1-201ENST00000261443 ARMC9Q7Z3E5 817 aa8□□□□□ -1.13
CSDE1-201ENST00000261443 CCT6BQ92526 530 aa8□□□□□ -1.13
CSDE1-201ENST00000261443 CCDC47Q96A33 483 aaKnown RBP8□□□□□ -1.13
CSDE1-201ENST00000261443 ORAI2Q96SN7 254 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms