RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 USP17L19D6RCP7 530 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 USP17L20D6RJB6 530 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 ZSCAN22P10073 491 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 ARP10275 920 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 USP17L24Q0WX57 530 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 OS9Q13438 667 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 USP17L6PQ6QN14 398 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 REXO2Q9Y3B8 237 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 HELZP42694 1942 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 GRB10Q13322 594 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 DPP8Q6V1X1 898 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 HSD17B14Q9BPX1 270 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 CHMP3Q9Y3E7 222 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 ELP1O95163 1332 aa6.67□□□□□ -1.34
TOPBP1-201ENST00000260810 ZNF445P59923 1031 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 IL27Q8NEV9 243 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 C12orf42Q96LP6 360 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 CNOT7Q9UIV1 285 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 SALL4Q9UJQ4 1053 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 FRMPD2Q68DX3 1309 aaPredicted RBP6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 MYOFQ9NZM1 2061 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 SPDYE16A6NNV3 312 aaPredicted RBP6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 ATP1A3P13637 1013 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 ANGEL2Q5VTE6 544 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 FAM83AQ86UY5 434 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 BRI3BPQ8WY22 251 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 BCL11AQ9H165 835 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 KCNH4Q9UQ05 1017 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 PPP1R3GB7ZBB8 358 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 STX6O43752 255 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 GH2P01242 217 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 DPCR1Q3MIW9 517 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 KRT40Q6A162 431 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 CCDC62Q6P9F0 684 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 EPM2AIP1Q7L775 607 aaPredicted RBP6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 NPM2Q86SE8 214 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 BARHL2Q9NY43 387 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 USP20Q9Y2K6 914 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 MAGEB6P1A0A0J9YX57 407 aa6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 GJC2Q5T442 439 aaPredicted RBP6.66□□□□□ -1.34
TOPBP1-201ENST00000260810 MIIPQ5JXC2 388 aa6.65□□□□□ -1.34
TOPBP1-201ENST00000260810 NOL9Q5SY16 702 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-201ENST00000260810 FKBP1CQ5VVH2 108 aa6.65□□□□□ -1.34
TOPBP1-201ENST00000260810 PIGSQ96S52 555 aa6.65□□□□□ -1.34
TOPBP1-201ENST00000260810 ZBTB21Q9ULJ3 1066 aa6.65□□□□□ -1.34
TOPBP1-201ENST00000260810 KLF18A0A0U1RQI7 1052 aa6.65□□□□□ -1.34
TOPBP1-201ENST00000260810 EFEMP2O95967 443 aa6.65□□□□□ -1.34
TOPBP1-201ENST00000260810 TMX1Q9H3N1 280 aa6.65□□□□□ -1.34
TOPBP1-201ENST00000260810 PLXNB3Q9ULL4 1909 aa6.65□□□□□ -1.34
TOPBP1-201ENST00000260810 VCAM1P19320 739 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 ZSCAN23Q3MJ62 389 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 MYSM1Q5VVJ2 828 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 TRMT44Q8IYL2 757 aaKnown RBP6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 GMCL1P1Q8NEA9 526 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 ELMO3Q96BJ8 720 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 CDC5LQ99459 802 aaKnown RBP6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 SLC38A10Q9HBR0 1119 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 LRRC4CQ9HCJ2 640 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 UBE2SQ16763 222 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 DGKHQ86XP1 1220 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 SPICE1Q8N0Z3 855 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 DAGLBQ8NCG7 672 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 FAM151AQ8WW52 585 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 GMCL1Q96IK5 515 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 PDRG1Q9NUG6 133 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 SUGT1Q9Y2Z0 365 aa6.65□□□□□ -1.35
TOPBP1-201ENST00000260810 F5H6K3 240 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 NOL4O94818 638 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 PDE6BP35913 854 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 KLRC3Q07444 240 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 NAA16Q6N069 864 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 TAPT1Q6NXT6 567 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 CD300LGQ6UXG3 332 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 LBX2Q6XYB7 198 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 ANKS1BQ7Z6G8 1248 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 CCDC82Q8N4S0 544 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 MORC4Q8TE76 937 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 BSNDQ8WZ55 320 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 MPHOSPH8Q99549 860 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 RTEL1Q9NZ71 1219 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 MED24O75448 989 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 CHAF1AQ13111 956 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 GPC2Q8N158 579 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 AGBL3Q8NEM8 1001 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 RBM17Q96I25 401 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 ZSWIM1Q9BR11 485 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 SPZ1Q9BXG8 430 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 PRR12Q9ULL5 1215 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 A0A0G2JLL6 359 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 PRPF3O43395 683 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 ITGB8P26012 769 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 ADSSP30520 456 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 CNTN2Q02246 1040 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 HYIQ5T013 277 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 RESP18Q5W5W9 173 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 PRRT2Q7Z6L0 340 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 LENG1Q96BZ8 264 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 PIM2Q9P1W9 311 aa6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 ZNF106Q9H2Y7 1883 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-201ENST00000260810 GLTPD2A6NH11 291 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms