RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 KIAA0355O15063 1070 aa19.89■□□□□ 0.77
CGREF1-201ENST00000260595 PQBP1O60828 265 aaKnown RBP19.89■□□□□ 0.77
CGREF1-201ENST00000260595 C6orf222P0C671 652 aaPredicted RBP19.89■□□□□ 0.77
CGREF1-201ENST00000260595 SNHG28P0DPA3 235 aa19.89■□□□□ 0.77
CGREF1-201ENST00000260595 NEDD4P46934 1319 aa19.89■□□□□ 0.77
CGREF1-201ENST00000260595 C9orf50Q5SZB4 431 aa19.89■□□□□ 0.77
CGREF1-201ENST00000260595 SYDE2Q5VT97 1194 aa19.89■□□□□ 0.77
CGREF1-201ENST00000260595 FRMPD2Q68DX3 1309 aaPredicted RBP19.89■□□□□ 0.77
CGREF1-201ENST00000260595 CWC27Q6UX04 472 aaKnown RBP19.89■□□□□ 0.77
CGREF1-201ENST00000260595 TOX2Q96NM4 488 aa19.89■□□□□ 0.77
CGREF1-201ENST00000260595 GPCPD1Q9NPB8 672 aa19.89■□□□□ 0.77
CGREF1-201ENST00000260595 MTMR10Q9NXD2 777 aa19.89■□□□□ 0.77
CGREF1-201ENST00000260595 DDX49Q9Y6V7 483 aaKnown RBP19.89■□□□□ 0.77
CGREF1-201ENST00000260595 ELP1O95163 1332 aa19.88■□□□□ 0.77
CGREF1-201ENST00000260595 ASGR1P07306 291 aa19.88■□□□□ 0.77
CGREF1-201ENST00000260595 CDK7P50613 346 aa19.88■□□□□ 0.77
CGREF1-201ENST00000260595 FAAP100Q0VG06 881 aa19.88■□□□□ 0.77
CGREF1-201ENST00000260595 PCSK9Q8NBP7 692 aaKnown RBP19.88■□□□□ 0.77
CGREF1-201ENST00000260595 PURBQ96QR8 312 aaKnown RBP19.88■□□□□ 0.77
CGREF1-201ENST00000260595 RNF41Q9H4P4 317 aaPredicted RBP19.88■□□□□ 0.77
CGREF1-201ENST00000260595 GNEQ9Y223 722 aaKnown RBP19.88■□□□□ 0.77
CGREF1-201ENST00000260595 ZNF213O14771 459 aa19.87■□□□□ 0.77
CGREF1-201ENST00000260595 TNFAIP2Q03169 654 aa19.87■□□□□ 0.77
CGREF1-201ENST00000260595 ZNF543Q08ER8 600 aa19.87■□□□□ 0.77
CGREF1-201ENST00000260595 GNASQ5JWF2 1037 aa19.87■□□□□ 0.77
CGREF1-201ENST00000260595 NSMFQ6X4W1 530 aa19.87■□□□□ 0.77
CGREF1-201ENST00000260595 MORC4Q8TE76 937 aa19.87■□□□□ 0.77
CGREF1-201ENST00000260595 ESR2Q92731 530 aa19.87■□□□□ 0.77
CGREF1-201ENST00000260595 GLT1D1Q96MS3 346 aa19.87■□□□□ 0.77
CGREF1-201ENST00000260595 SPC25Q9HBM1 224 aa19.87■□□□□ 0.77
CGREF1-201ENST00000260595 DIAPH3Q9NSV4 1193 aa19.87■□□□□ 0.77
CGREF1-201ENST00000260595 EPHB4P54760 987 aa19.86■□□□□ 0.77
CGREF1-201ENST00000260595 FAM109BQ6ICB4 259 aaPredicted RBP19.86■□□□□ 0.77
CGREF1-201ENST00000260595 TAPT1Q6NXT6 567 aa19.86■□□□□ 0.77
CGREF1-201ENST00000260595 DGKHQ86XP1 1220 aa19.86■□□□□ 0.77
CGREF1-201ENST00000260595 CLEC4DQ8WXI8 215 aa19.86■□□□□ 0.77
CGREF1-201ENST00000260595 ZKSCAN3Q9BRR0 538 aa19.86■□□□□ 0.77
CGREF1-201ENST00000260595 PDGFCQ9NRA1 345 aa19.86■□□□□ 0.77
CGREF1-201ENST00000260595 TMEM39AQ9NV64 488 aa19.86■□□□□ 0.77
CGREF1-201ENST00000260595 SUPT16HQ9Y5B9 1047 aaKnown RBP19.86■□□□□ 0.77
CGREF1-201ENST00000260595 MCM3APO60318 1980 aa19.86■□□□□ 0.77
CGREF1-201ENST00000260595 DCDC2CA8MYV0 355 aa19.85■□□□□ 0.77
CGREF1-201ENST00000260595 HIP1O00291 1037 aa19.85■□□□□ 0.77
CGREF1-201ENST00000260595 NFIBO00712 420 aa19.85■□□□□ 0.77
CGREF1-201ENST00000260595 SMPD1P17405 629 aa19.85■□□□□ 0.77
CGREF1-201ENST00000260595 PTGS1P23219 599 aa19.85■□□□□ 0.77
CGREF1-201ENST00000260595 PDE4AP27815 886 aa19.85■□□□□ 0.77
CGREF1-201ENST00000260595 BAATQ14032 418 aaPredicted RBP19.85■□□□□ 0.77
CGREF1-201ENST00000260595 DSCC1Q9BVC3 393 aa19.85■□□□□ 0.77
CGREF1-201ENST00000260595 RAG1P15918 1043 aa19.84■□□□□ 0.77
CGREF1-201ENST00000260595 NT5C2P49902 561 aa19.84■□□□□ 0.77
CGREF1-201ENST00000260595 BEX3Q00994 111 aa19.84■□□□□ 0.77
CGREF1-201ENST00000260595 TMEM63BQ5T3F8 832 aa19.84■□□□□ 0.77
CGREF1-201ENST00000260595 IQSEC1Q6DN90 963 aa19.84■□□□□ 0.77
CGREF1-201ENST00000260595 FBXO16Q8IX29 292 aaPredicted RBP19.84■□□□□ 0.77
CGREF1-201ENST00000260595 ANKS1AQ92625 1134 aa19.84■□□□□ 0.77
CGREF1-201ENST00000260595 IL25Q9H293 177 aa19.84■□□□□ 0.77
CGREF1-201ENST00000260595 TBX21Q9UL17 535 aa19.84■□□□□ 0.77
CGREF1-201ENST00000260595 STXBP5LQ9Y2K9 1186 aa19.84■□□□□ 0.77
CGREF1-201ENST00000260595 A0A0U1RQG5 324 aaPredicted RBP19.83■□□□□ 0.77
CGREF1-201ENST00000260595 ARVCFO00192 962 aa19.83■□□□□ 0.77
CGREF1-201ENST00000260595 KDM4AO75164 1064 aa19.83■□□□□ 0.77
CGREF1-201ENST00000260595 EEPD1Q7L9B9 569 aa19.83■□□□□ 0.77
CGREF1-201ENST00000260595 TLK2Q86UE8 772 aa19.83■□□□□ 0.77
CGREF1-201ENST00000260595 MROH7Q68CQ1 1323 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 WDR19Q8NEZ3 1342 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 B4E1Z4 1266 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 GOLGA8HP0CJ92 632 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 ALDH5A1P51649 535 aaPredicted RBP19.82■□□□□ 0.76
CGREF1-201ENST00000260595 GPATCH4Q5T3I0 446 aaKnown RBP19.82■□□□□ 0.76
CGREF1-201ENST00000260595 SLC30A10Q6XR72 485 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 NOL8Q76FK4 1167 aaKnown RBP19.82■□□□□ 0.76
CGREF1-201ENST00000260595 FAM126BQ8IXS8 530 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 VTI1AQ96AJ9 217 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 VTA1Q9NP79 307 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 ZSWIM5Q9P217 1185 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 PNMA2Q9UL42 364 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 Q9Y3F1 56 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 LCTP09848 1927 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 LRRC37A2A6NM11 1700 aa19.82■□□□□ 0.76
CGREF1-201ENST00000260595 LOC102724159A0A0B4J2E5 919 aa19.81■□□□□ 0.76
CGREF1-201ENST00000260595 DYNC1LI2O43237 492 aaPredicted RBP19.81■□□□□ 0.76
CGREF1-201ENST00000260595 TIMP1P01033 207 aa19.81■□□□□ 0.76
CGREF1-201ENST00000260595 GSPT1P15170 499 aaKnown RBP19.81■□□□□ 0.76
CGREF1-201ENST00000260595 FPGSQ05932 587 aa19.81■□□□□ 0.76
CGREF1-201ENST00000260595 PWP2Q15269 919 aaKnown RBP19.81■□□□□ 0.76
CGREF1-201ENST00000260595 FSCN1Q16658 493 aaKnown RBP19.81■□□□□ 0.76
CGREF1-201ENST00000260595 CCDC178Q5BJE1 867 aa19.81■□□□□ 0.76
CGREF1-201ENST00000260595 CXCL17Q6UXB2 119 aa19.81■□□□□ 0.76
CGREF1-201ENST00000260595 IQCA1Q86XH1 822 aa19.81■□□□□ 0.76
CGREF1-201ENST00000260595 SLC43A3Q8NBI5 491 aa19.81■□□□□ 0.76
CGREF1-201ENST00000260595 PNMA1Q8ND90 353 aa19.81■□□□□ 0.76
CGREF1-201ENST00000260595 GUCD1Q96NT3 240 aa19.81■□□□□ 0.76
CGREF1-201ENST00000260595 UBA5Q9GZZ9 404 aa19.81■□□□□ 0.76
CGREF1-201ENST00000260595 CPVLQ9H3G5 476 aa19.81■□□□□ 0.76
CGREF1-201ENST00000260595 ADD3Q9UEY8 706 aaKnown RBP19.81■□□□□ 0.76
CGREF1-201ENST00000260595 COL6A3P12111 3177 aa19.81■□□□□ 0.76
CGREF1-201ENST00000260595 PTPDC1A2A3K4 754 aa19.8■□□□□ 0.76
CGREF1-201ENST00000260595 IMMTQ16891 758 aaKnown RBP19.8■□□□□ 0.76
CGREF1-201ENST00000260595 TTC22Q5TAA0 569 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms