RNA–Protein interactions for RNA: ENST00000259006.7

LIMD2-201, Transcript of LIM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD2, Length 3,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-201ENST00000259006 RANBP1P43487 201 aa15.52■□□□□ 0.07
LIMD2-201ENST00000259006 RNASE9P60153 205 aaKnown RBP15.52■□□□□ 0.07
LIMD2-201ENST00000259006 MAP3K12Q12852 859 aa15.52■□□□□ 0.07
LIMD2-201ENST00000259006 RNF187Q5TA31 235 aaPredicted RBP15.52■□□□□ 0.07
LIMD2-201ENST00000259006 ACSBG1Q96GR2 724 aa15.52■□□□□ 0.07
LIMD2-201ENST00000259006 MTRQ99707 1265 aa15.52■□□□□ 0.07
LIMD2-201ENST00000259006 ALS2Q96Q42 1657 aa15.52■□□□□ 0.07
LIMD2-201ENST00000259006 GOLGA6CA6NDK9 693 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 ZEB2O60315 1214 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 PDE8BO95263 885 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 GOLGA6DP0CG33 693 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 EZRP15311 586 aaKnown RBP15.51■□□□□ 0.07
LIMD2-201ENST00000259006 PECAM1P16284 738 aaPredicted RBP15.51■□□□□ 0.07
LIMD2-201ENST00000259006 AMPD2Q01433 879 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 UBE3CQ15386 1083 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 TTC38Q5R3I4 469 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 GOLGA6AQ9NYA3 693 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 ZNF232Q9UNY5 417 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 WTIPA6NIX2 430 aaPredicted RBP15.51■□□□□ 0.07
LIMD2-201ENST00000259006 CDR1P51861 262 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 NGLY1Q96IV0 654 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 TRIM47Q96LD4 638 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 KDM4CQ9H3R0 1056 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 ASAP1Q9ULH1 1129 aa15.51■□□□□ 0.07
LIMD2-201ENST00000259006 PARP1P09874 1014 aaKnown RBP15.5■□□□□ 0.07
LIMD2-201ENST00000259006 FAM163BP0C2L3 166 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 HERVK_113P62684 666 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 KRT23Q9C075 422 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 YIPF3Q9GZM5 350 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 SUDS3Q9H7L9 328 aaPredicted RBP15.5■□□□□ 0.07
LIMD2-201ENST00000259006 FAM170AA1A519 330 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 NKRFO15226 690 aaKnown RBP eCLIP15.5■□□□□ 0.07
LIMD2-201ENST00000259006 PLEKP08567 350 aaPredicted RBP15.5■□□□□ 0.07
LIMD2-201ENST00000259006 RAB27AP51159 221 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 FAM76AQ8TAV0 307 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 SPATA20Q8TB22 786 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 GSDMAQ96QA5 445 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 AATFQ9NY61 560 aaKnown RBP eCLIP15.5■□□□□ 0.07
LIMD2-201ENST00000259006 GOLGA6BA6NDN3 693 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 XBP1P17861 261 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 FNTAP49354 379 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 NLRP5P59047 1200 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 ANKRD23Q86SG2 305 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 SH2D3CQ8N5H7 860 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 OR8K1Q8NGG5 319 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 ISCA1Q9BUE6 129 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 NACAP1Q9BZK3 213 aa15.5■□□□□ 0.07
LIMD2-201ENST00000259006 TCRBV5S4A2TA0A5A2 114 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 KIF4AO95239 1232 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 GNGT1P63211 74 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 ENOX2Q16206 610 aaKnown RBP15.49■□□□□ 0.07
LIMD2-201ENST00000259006 CCDC96Q2M329 555 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 COG1Q8WTW3 980 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 LMBR1Q8WVP7 490 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 DMGDHQ9UI17 866 aaKnown RBP15.49■□□□□ 0.07
LIMD2-201ENST00000259006 WDR19Q8NEZ3 1342 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 TMCO5BA8MYB1 307 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 MYBL1P10243 752 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 CYP7A1P22680 504 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 IRAK1P51617 712 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 FAM47AQ5JRC9 791 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 TRAPPC11Q7Z392 1133 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 ZNF579Q8NAF0 562 aaKnown RBP15.49■□□□□ 0.07
LIMD2-201ENST00000259006 HPS3Q969F9 1004 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 LMCD1Q9NZU5 365 aa15.49■□□□□ 0.07
LIMD2-201ENST00000259006 WLSQ5T9L3 541 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 ZBTB38Q8NAP3 1195 aaPredicted RBP15.48■□□□□ 0.07
LIMD2-201ENST00000259006 LRRC1Q9BTT6 524 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 JAG2Q9Y219 1238 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 NCK2O43639 380 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 STAT6P42226 847 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 SF3A3Q12874 501 aaKnown RBP eCLIP15.48■□□□□ 0.07
LIMD2-201ENST00000259006 PKN1Q16512 942 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 PTPROQ16827 1216 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 FAM182BQ5T319 152 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 IFIT1BQ5T764 474 aaKnown RBP15.48■□□□□ 0.07
LIMD2-201ENST00000259006 CNNM2Q9H8M5 875 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 MLXIPQ9HAP2 919 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 OVOS2A0A0G2JMS6 1433 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 PRPF6O94906 941 aaKnown RBP15.48■□□□□ 0.07
LIMD2-201ENST00000259006 RPN1P04843 607 aaKnown RBP15.48■□□□□ 0.07
LIMD2-201ENST00000259006 ABCD1P33897 745 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 ICA1Q05084 483 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 PDCD2Q16342 344 aaPredicted RBP15.48■□□□□ 0.07
LIMD2-201ENST00000259006 HHATQ5VTY9 493 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 GPKOWQ92917 476 aaPredicted RBP eCLIP15.48■□□□□ 0.07
LIMD2-201ENST00000259006 ZCWPW1Q9H0M4 648 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 LRWD1Q9UFC0 647 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 CDHR2Q9BYE9 1310 aa15.48■□□□□ 0.07
LIMD2-201ENST00000259006 ESYT3A0FGR9 886 aa15.47■□□□□ 0.07
LIMD2-201ENST00000259006 AGPSO00116 658 aa15.47■□□□□ 0.07
LIMD2-201ENST00000259006 PDCLQ13371 301 aa15.47■□□□□ 0.07
LIMD2-201ENST00000259006 IL17AQ16552 155 aa15.47■□□□□ 0.07
LIMD2-201ENST00000259006 WDR59Q6PJI9 974 aa15.47■□□□□ 0.07
LIMD2-201ENST00000259006 ADGRA1Q86SQ6 560 aa15.47■□□□□ 0.07
LIMD2-201ENST00000259006 TMOD3Q9NYL9 352 aa15.47■□□□□ 0.07
LIMD2-201ENST00000259006 PCDH11XQ9BZA7 1347 aa15.47■□□□□ 0.07
LIMD2-201ENST00000259006 PCDH11YQ9BZA8 1340 aa15.47■□□□□ 0.07
LIMD2-201ENST00000259006 COL5A2P05997 1499 aaPredicted RBP15.47■□□□□ 0.07
LIMD2-201ENST00000259006 MYO5AQ9Y4I1 1855 aaKnown RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms