RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 PKN1Q16512 942 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 PFKFB3Q16875 520 aaPredicted RBP5.28□□□□□ -1.56
USP44-201ENST00000258499 FAM182BQ5T319 152 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 KCTD16Q68DU8 428 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 RASGRP2Q7LDG7 609 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 TMEM139Q8IV31 216 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 ZNF34Q8IZ26 560 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 REXO1Q8N1G1 1221 aaKnown RBP5.28□□□□□ -1.56
USP44-201ENST00000258499 KIFC2Q96AC6 838 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 FAM84BQ96KN1 310 aaPredicted RBP5.28□□□□□ -1.56
USP44-201ENST00000258499 SLC4A9Q96Q91 983 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 EYA3Q99504 573 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 POLD4Q9HCU8 107 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 RRP15Q9Y3B9 282 aaKnown RBP5.28□□□□□ -1.56
USP44-201ENST00000258499 LGALS16A8MUM7 142 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 MYO1CO00159 1063 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 EBAG9O00559 213 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 MOCS3O95396 460 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 FCER1AP12319 257 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 FGFR2P21802 821 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 RFC4P35249 363 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 ZNF76P36508 570 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 ATP1A2P50993 1020 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 GUCY2FP51841 1108 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 RASSF7Q02833 373 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 CALCRLQ16602 461 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 TXNRD1Q16881 649 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 KLHL7Q8IXQ5 586 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 LRRC47Q8N1G4 583 aaKnown RBP5.28□□□□□ -1.56
USP44-201ENST00000258499 FAM71BQ8TC56 605 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 P2RX5Q93086 422 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 MMS19Q96T76 1030 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 NUP58Q9BVL2 599 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 TMEM60Q9H2L4 133 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 ATP8A2Q9NTI2 1148 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 SRP68Q9UHB9 627 aaKnown RBP5.28□□□□□ -1.56
USP44-201ENST00000258499 TACC3Q9Y6A5 838 aa5.28□□□□□ -1.56
USP44-201ENST00000258499 RIMBP2O15034 1052 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 SEMA3EO15041 775 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 KCNQ2O43526 872 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 ATP2C2O75185 946 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 EEF1GP26641 437 aaKnown RBP5.27□□□□□ -1.57
USP44-201ENST00000258499 HPDP32754 393 aaPredicted RBP5.27□□□□□ -1.57
USP44-201ENST00000258499 SF3A3Q12874 501 aaKnown RBP eCLIP5.27□□□□□ -1.57
USP44-201ENST00000258499 KRT25Q7Z3Z0 450 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 NEK8Q86SG6 692 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 TBCKQ8TEA7 893 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 CEP89Q96ST8 783 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 BRIP1Q9BX63 1249 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 ANKRD2Q9GZV1 360 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 KANSL2Q9H9L4 492 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 KCND1Q9NSA2 647 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 MYO1AQ9UBC5 1043 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 DUSP10Q9Y6W6 482 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 FANCGO15287 622 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 UFL1O94874 794 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 GSTO1P78417 241 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 SEC23AQ15436 765 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 FAM98CQ17RN3 349 aaKnown RBP5.27□□□□□ -1.57
USP44-201ENST00000258499 HERC4Q5GLZ8 1057 aaPredicted RBP5.27□□□□□ -1.57
USP44-201ENST00000258499 DCAF17Q5H9S7 520 aaPredicted RBP5.27□□□□□ -1.57
USP44-201ENST00000258499 CFAP58Q5T655 872 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 RSRC2Q7L4I2 434 aaKnown RBP5.27□□□□□ -1.57
USP44-201ENST00000258499 COA7Q96BR5 231 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 NGLY1Q96IV0 654 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 MED15Q96RN5 788 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 MLXIPQ9HAP2 919 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 SMARCAL1Q9NZC9 954 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 ZNF219Q9P2Y4 722 aaPredicted RBP5.27□□□□□ -1.57
USP44-201ENST00000258499 NALCNQ8IZF0 1738 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 ZNF804BA4D1E1 1349 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 RIC1Q4ADV7 1423 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 NDUFAB1O14561 156 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 CCNE1P24864 410 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 EIF4A3P38919 411 aaKnown RBP5.27□□□□□ -1.57
USP44-201ENST00000258499 CCT5P48643 541 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 TTC31Q49AM3 519 aaPredicted RBP5.27□□□□□ -1.57
USP44-201ENST00000258499 BEND6Q5SZJ8 279 aaPredicted RBP5.27□□□□□ -1.57
USP44-201ENST00000258499 TRIM58Q8NG06 486 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 NOX5Q96PH1 765 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 PIGSQ96S52 555 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 TSGA10Q9BZW7 698 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 ANKZF1Q9H8Y5 726 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 GOPCQ9HD26 462 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 MED4Q9NPJ6 270 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 LIMA1Q9UHB6 759 aaKnown RBP5.27□□□□□ -1.57
USP44-201ENST00000258499 CNTNAP5Q8WYK1 1306 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 LTN1O94822 1766 aa5.27□□□□□ -1.57
USP44-201ENST00000258499 FAM237AA0A1B0GTK4 181 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 RNF225M0QZC1 329 aaPredicted RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 OPA1O60313 960 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 PMS1P54277 932 aaKnown RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 POLR2FP61218 127 aaKnown RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 ZBED6P86452 979 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 STK4Q13043 487 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 CT47A1Q5JQC4 288 aaPredicted RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 CDKAL1Q5VV42 579 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 ARL6IP4Q66PJ3 421 aaKnown RBP5.26□□□□□ -1.57
USP44-201ENST00000258499 ZNF804AQ7Z570 1209 aa5.26□□□□□ -1.57
USP44-201ENST00000258499 CCDC84Q86UT8 332 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms