RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 OR52Z1P0C646 297 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 TXKP42681 527 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 PPP4CP60510 307 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 GSTO1P78417 241 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 ZMYND12Q9H0C1 365 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 TCP11L1Q9NUJ3 509 aa28.66■■■□□ 2.18
RAB40C-201ENST00000248139 ST5P78524 1137 aa28.65■■■□□ 2.18
RAB40C-201ENST00000248139 TRAPPC3LQ5T215 181 aa28.65■■■□□ 2.18
RAB40C-201ENST00000248139 NOA1Q8NC60 698 aaKnown RBP28.65■■■□□ 2.18
RAB40C-201ENST00000248139 DAGLBQ8NCG7 672 aa28.65■■■□□ 2.18
RAB40C-201ENST00000248139 OR8K1Q8NGG5 319 aa28.65■■■□□ 2.18
RAB40C-201ENST00000248139 TUBGCP2Q9BSJ2 902 aa28.65■■■□□ 2.18
RAB40C-201ENST00000248139 TRIM9Q9C026 710 aa28.65■■■□□ 2.18
RAB40C-201ENST00000248139 NONOQ15233 471 aaKnown RBP eCLIP28.65■■■□□ 2.181e-6■■■■□ 24.9
RAB40C-201ENST00000248139 COA7Q96BR5 231 aa28.65■■■□□ 2.18
RAB40C-201ENST00000248139 ROBO3Q96MS0 1386 aa28.64■■■□□ 2.18
RAB40C-201ENST00000248139 SNED1Q8TER0 1413 aa28.64■■■□□ 2.18
RAB40C-201ENST00000248139 MAGEC2Q9UBF1 373 aaPredicted RBP28.64■■■□□ 2.18
RAB40C-201ENST00000248139 RASSF10A6NK89 507 aa28.64■■■□□ 2.17
RAB40C-201ENST00000248139 SRGAP2O75044 1071 aa28.64■■■□□ 2.17
RAB40C-201ENST00000248139 PICALMQ13492 652 aa28.64■■■□□ 2.17
RAB40C-201ENST00000248139 MCM6Q14566 821 aa28.64■■■□□ 2.17
RAB40C-201ENST00000248139 KCNB1Q14721 858 aa28.64■■■□□ 2.17
RAB40C-201ENST00000248139 PCMTD1Q96MG8 357 aaPredicted RBP28.64■■■□□ 2.17
RAB40C-201ENST00000248139 SLC39A2Q9NP94 309 aa28.64■■■□□ 2.17
RAB40C-201ENST00000248139 SLURP2P0DP57 97 aa28.63■■■□□ 2.17
RAB40C-201ENST00000248139 STIM1Q13586 685 aa28.63■■■□□ 2.17
RAB40C-201ENST00000248139 LRRC47Q8N1G4 583 aaKnown RBP28.63■■■□□ 2.17
RAB40C-201ENST00000248139 MMTAG2Q9BU76 263 aaKnown RBP28.63■■■□□ 2.17
RAB40C-201ENST00000248139 SBF2Q86WG5 1849 aa28.63■■■□□ 2.17
RAB40C-201ENST00000248139 F8W031 263 aaPredicted RBP28.63■■■□□ 2.17
RAB40C-201ENST00000248139 HERVK_113P62684 666 aa28.63■■■□□ 2.17
RAB40C-201ENST00000248139 MFSD14BQ5SR56 506 aa28.63■■■□□ 2.17
RAB40C-201ENST00000248139 CEP112Q8N8E3 955 aa28.63■■■□□ 2.17
RAB40C-201ENST00000248139 GJA10Q969M2 543 aa28.63■■■□□ 2.17
RAB40C-201ENST00000248139 MAST2Q6P0Q8 1798 aa28.62■■■□□ 2.17
RAB40C-201ENST00000248139 PRR5LQ6MZQ0 368 aa28.62■■■□□ 2.17
RAB40C-201ENST00000248139 EXOC1Q9NV70 894 aa28.62■■■□□ 2.17
RAB40C-201ENST00000248139 LDHCP07864 332 aa28.62■■■□□ 2.17
RAB40C-201ENST00000248139 TRIM21P19474 475 aaKnown RBP28.62■■■□□ 2.17
RAB40C-201ENST00000248139 TRIM14Q14142 442 aa28.62■■■□□ 2.17
RAB40C-201ENST00000248139 C16orf86Q6ZW13 317 aa28.62■■■□□ 2.17
RAB40C-201ENST00000248139 NEK8Q86SG6 692 aa28.62■■■□□ 2.17
RAB40C-201ENST00000248139 RPGRQ92834 1020 aaKnown RBP28.62■■■□□ 2.17
RAB40C-201ENST00000248139 RRP36Q96EU6 259 aaKnown RBP28.62■■■□□ 2.17
RAB40C-201ENST00000248139 CNOT6LQ96LI5 555 aaKnown RBP28.62■■■□□ 2.17
RAB40C-201ENST00000248139 DUSP10Q9Y6W6 482 aa28.62■■■□□ 2.17
RAB40C-201ENST00000248139 TBC1D8BQ0IIM8 1120 aa28.61■■■□□ 2.17
RAB40C-201ENST00000248139 DYMQ7RTS9 669 aa28.61■■■□□ 2.17
RAB40C-201ENST00000248139 RCCD1A6NED2 376 aa28.61■■■□□ 2.17
RAB40C-201ENST00000248139 EEF1GP26641 437 aaKnown RBP28.61■■■□□ 2.17
RAB40C-201ENST00000248139 CYP27A1Q02318 531 aa28.61■■■□□ 2.17
RAB40C-201ENST00000248139 SOGA3Q5TF21 947 aa28.61■■■□□ 2.17
RAB40C-201ENST00000248139 THAP9Q9H5L6 903 aa28.61■■■□□ 2.17
RAB40C-201ENST00000248139 C6orf50Q9HD87 102 aa28.61■■■□□ 2.17
RAB40C-201ENST00000248139 ABCB6Q9NP58 842 aa28.61■■■□□ 2.17
RAB40C-201ENST00000248139 SEC63Q9UGP8 760 aaKnown RBP28.61■■■□□ 2.17
RAB40C-201ENST00000248139 H3BQF6 201 aa28.6■■■□□ 2.17
RAB40C-201ENST00000248139 RHBDL3P58872 404 aa28.6■■■□□ 2.17
RAB40C-201ENST00000248139 NEDD1Q8NHV4 660 aa28.6■■■□□ 2.17
RAB40C-201ENST00000248139 P2RX5Q93086 422 aa28.6■■■□□ 2.17
RAB40C-201ENST00000248139 SPZ1Q9BXG8 430 aa28.6■■■□□ 2.17
RAB40C-201ENST00000248139 MTIF2P46199 727 aaKnown RBP28.6■■■□□ 2.17
RAB40C-201ENST00000248139 VSNL1P62760 191 aa28.6■■■□□ 2.17
RAB40C-201ENST00000248139 LACRTQ9GZZ8 138 aa28.6■■■□□ 2.17
RAB40C-201ENST00000248139 MYO6Q9UM54 1294 aa28.6■■■□□ 2.17
RAB40C-201ENST00000248139 CAPN11Q9UMQ6 739 aa28.6■■■□□ 2.17
RAB40C-201ENST00000248139 VPS72Q15906 364 aa28.59■■■□□ 2.17
RAB40C-201ENST00000248139 CCDC122Q5T0U0 273 aa28.59■■■□□ 2.17
RAB40C-201ENST00000248139 GALNT17Q6IS24 598 aa28.59■■■□□ 2.17
RAB40C-201ENST00000248139 KRT25Q7Z3Z0 450 aa28.59■■■□□ 2.17
RAB40C-201ENST00000248139 KIAA0895Q8NCT3 520 aa28.59■■■□□ 2.17
RAB40C-201ENST00000248139 NEK11Q8NG66 645 aa28.59■■■□□ 2.17
RAB40C-201ENST00000248139 UBXN6Q9BZV1 441 aa28.59■■■□□ 2.17
RAB40C-201ENST00000248139 COL24A1Q17RW2 1714 aa28.59■■■□□ 2.17
RAB40C-201ENST00000248139 CCDC151A5D8V7 595 aa28.59■■■□□ 2.17
RAB40C-201ENST00000248139 TDP2O95551 362 aa28.59■■■□□ 2.17
RAB40C-201ENST00000248139 DNAJC7Q99615 494 aa28.59■■■□□ 2.17
RAB40C-201ENST00000248139 GPCPD1Q9NPB8 672 aa28.59■■■□□ 2.17
RAB40C-201ENST00000248139 BTAF1O14981 1849 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 GPR75-ASB3A0A0A6YYF3 556 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 CTAGE15A4D2H0 777 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 SLC37A4O43826 429 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 ATP1A1P05023 1023 aaKnown RBP28.58■■■□□ 2.17
RAB40C-201ENST00000248139 CTAGE8P0CG41 777 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 PRPHP41219 470 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 CTAGE6Q86UF2 777 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 CTAGE4Q8IX94 777 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 CAPZA3Q96KX2 299 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 NUDT12Q9BQG2 462 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 LRRC4BQ9NT99 713 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 POLLQ9UGP5 575 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 NAV1Q8NEY1 1877 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 POTEMA6NI47 508 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 SRGNP10124 158 aa28.58■■■□□ 2.17
RAB40C-201ENST00000248139 TSR1Q2NL82 804 aaKnown RBP28.58■■■□□ 2.17
RAB40C-201ENST00000248139 BEND6Q5SZJ8 279 aaPredicted RBP28.58■■■□□ 2.17
RAB40C-201ENST00000248139 RIMBP2O15034 1052 aa28.57■■■□□ 2.16
RAB40C-201ENST00000248139 AMPD2Q01433 879 aa28.57■■■□□ 2.16
RAB40C-201ENST00000248139 REXO1Q8N1G1 1221 aaKnown RBP28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms