RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 BRAPQ7Z569 592 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 MRPS27Q92552 414 aaKnown RBP19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 SHISA4Q96DD7 197 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 LZTS2Q9BRK4 669 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 SPZ1Q9BXG8 430 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 RIOX1Q9H6W3 641 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 MYH6P13533 1939 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 A0A1B0GVL5 298 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 A0A1W2PQ27 194 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 A0A1W2PQ64 194 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 A0A1W2PQD8 194 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 WDR46O15213 610 aaKnown RBP19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 DEXIO95424 95 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 KIF23Q02241 960 aaPredicted RBP19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 SYDE2Q5VT97 1194 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 HEATR3Q7Z4Q2 680 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 RRP36Q96EU6 259 aaKnown RBP19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 WNK4Q96J92 1243 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 POLR3EQ9NVU0 708 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 PRR12Q9ULL5 1215 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 KCNJ14Q9UNX9 436 aa19.36■□□□□ 0.69
CDKN1A-201ENST00000244741 SF3A1Q15459 793 aaKnown RBP19.35■□□□□ 0.69
CDKN1A-201ENST00000244741 NRBP1Q9UHY1 535 aa19.35■□□□□ 0.69
CDKN1A-201ENST00000244741 A0A0G2JLL6 359 aaPredicted RBP19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 YEATS4O95619 227 aa19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 NDUFA8P51970 172 aa19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 CCDC174Q6PII3 467 aa19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 CCDC186Q7Z3E2 898 aa19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 PRRT2Q7Z6L0 340 aaPredicted RBP19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 KCNG4Q8TDN1 519 aa19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 ERCC4Q92889 916 aaPredicted RBP19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 SEC63Q9UGP8 760 aaKnown RBP19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 PTPRFP10586 1907 aa19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 STK36Q9NRP7 1315 aa19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 SPTLC2O15270 562 aa19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 PPP1R11O60927 126 aaPredicted RBP19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 SCG2P13521 617 aa19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 DRC7Q8IY82 874 aa19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 COA7Q96BR5 231 aa19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 KCNH4Q9UQ05 1017 aa19.34■□□□□ 0.69
CDKN1A-201ENST00000244741 CXCL11O14625 94 aa19.33■□□□□ 0.69
CDKN1A-201ENST00000244741 RRP9O43818 475 aaKnown RBP19.33■□□□□ 0.69
CDKN1A-201ENST00000244741 PEX10O60683 326 aa19.33■□□□□ 0.69
CDKN1A-201ENST00000244741 HSP90AA2PQ14568 343 aaPredicted RBP19.33■□□□□ 0.69
CDKN1A-201ENST00000244741 CDC37Q16543 378 aaPredicted RBP19.33■□□□□ 0.69
CDKN1A-201ENST00000244741 PFKFB3Q16875 520 aaPredicted RBP19.33■□□□□ 0.69
CDKN1A-201ENST00000244741 QRICH1Q2TAL8 776 aa19.33■□□□□ 0.69
CDKN1A-201ENST00000244741 SH3D19Q5HYK7 790 aa19.33■□□□□ 0.69
CDKN1A-201ENST00000244741 WWC2Q6AWC2 1192 aa19.33■□□□□ 0.69
CDKN1A-201ENST00000244741 TYW1BQ6NUM6 668 aa19.33■□□□□ 0.69
CDKN1A-201ENST00000244741 PAXIP1Q6ZW49 1069 aaPredicted RBP19.33■□□□□ 0.69
CDKN1A-201ENST00000244741 FEM1BQ9UK73 627 aa19.33■□□□□ 0.69
CDKN1A-201ENST00000244741 TMEM88BA6NKF7 163 aa19.33■□□□□ 0.68
CDKN1A-201ENST00000244741 USH1GQ495M9 461 aa19.33■□□□□ 0.68
CDKN1A-201ENST00000244741 SPRYD7Q5W111 196 aa19.33■□□□□ 0.68
CDKN1A-201ENST00000244741 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.33■□□□□ 0.68
CDKN1A-201ENST00000244741 CHURC1Q8WUH1 139 aa19.33■□□□□ 0.68
CDKN1A-201ENST00000244741 C12orf42Q96LP6 360 aa19.33■□□□□ 0.68
CDKN1A-201ENST00000244741 SLF1Q9BQI6 1058 aa19.33■□□□□ 0.68
CDKN1A-201ENST00000244741 CEP350Q5VT06 3117 aa19.33■□□□□ 0.68
CDKN1A-201ENST00000244741 GOLGA6L19H0YKK7 550 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 SNAPC2Q13487 334 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 MOGSQ13724 837 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 ANO1Q5XXA6 986 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 BTNL9Q6UXG8 535 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 SDF4Q9BRK5 362 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 ANO10Q9NW15 660 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 ZBTB5O15062 677 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 ADAMTS3O15072 1205 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 KRT40Q6A162 431 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 RGMBQ6NW40 437 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 ATG4CQ96DT6 458 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 MS4A4AQ96JQ5 239 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 TLL2Q9Y6L7 1015 aa19.32■□□□□ 0.68
CDKN1A-201ENST00000244741 SMCHD1A6NHR9 2005 aa19.31■□□□□ 0.68
CDKN1A-201ENST00000244741 SMARCA1P28370 1054 aa19.31■□□□□ 0.68
CDKN1A-201ENST00000244741 RBM10P98175 930 aaKnown RBP19.31■□□□□ 0.68
CDKN1A-201ENST00000244741 LRMPQ12912 555 aa19.31■□□□□ 0.68
CDKN1A-201ENST00000244741 CATSPERGQ6ZRH7 1159 aa19.31■□□□□ 0.68
CDKN1A-201ENST00000244741 RASAL3Q86YV0 1011 aa19.31■□□□□ 0.68
CDKN1A-201ENST00000244741 DHX40Q8IX18 779 aaKnown RBP19.31■□□□□ 0.68
CDKN1A-201ENST00000244741 CPXCR1Q8N123 301 aa19.31■□□□□ 0.68
CDKN1A-201ENST00000244741 RGS22Q8NE09 1264 aa19.31■□□□□ 0.68
CDKN1A-201ENST00000244741 WASF1Q92558 559 aa19.31■□□□□ 0.68
CDKN1A-201ENST00000244741 CCL15-CCL14A0A0B4J2E2 113 aa19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 PNMA6FA0A0J9YX94 578 aa19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 UNCXA6NJT0 531 aa19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 FSTL1Q12841 308 aa19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 CCL15Q16663 113 aa19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 AXDND1Q5T1B0 1012 aaPredicted RBP19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 SARM1Q6SZW1 724 aa19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 PRPF38AQ8NAV1 312 aaKnown RBP19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 HTRA3P83110 453 aa19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 TRIM29Q14134 588 aa19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 FAM160B2Q86V87 743 aa19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 BRI3BPQ8WY22 251 aa19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 MTMR8Q96EF0 704 aa19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 PPP1R9AQ9ULJ8 1098 aa19.3■□□□□ 0.68
CDKN1A-201ENST00000244741 USP17L15C9J2P7 530 aa19.29■□□□□ 0.68
CDKN1A-201ENST00000244741 USP17L13C9JLJ4 530 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms