RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 GLI1P08151 1106 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 BIRC3Q13489 604 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 CCDC129Q6ZRS4 1044 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 CHMP6Q96FZ7 201 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 TRIM7Q9C029 511 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 PREBQ9HCU5 417 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 HSPA9P38646 679 aaKnown RBP14.38□□□□□ -0.11
MSH2-201ENST00000233146 STAT6P42226 847 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 MAEAQ7L5Y9 396 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 LCA5Q86VQ0 697 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 WHAMMQ8TF30 809 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 NOC3LQ8WTT2 800 aaKnown RBP14.38□□□□□ -0.11
MSH2-201ENST00000233146 TSPYL2Q9H2G4 693 aaPredicted RBP14.38□□□□□ -0.11
MSH2-201ENST00000233146 AFF2P51816 1311 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 SYNRGQ9UMZ2 1314 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 MYH13Q9UKX3 1938 aa14.38□□□□□ -0.11
MSH2-201ENST00000233146 MINK1Q8N4C8 1332 aaPredicted RBP14.37□□□□□ -0.11
MSH2-201ENST00000233146 H0YGN5 161 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 NCALDP61601 193 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 MPP3Q13368 585 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 RNF220Q5VTB9 566 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 OR52E8Q6IFG1 317 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 PIGWQ7Z7B1 504 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 NECTIN2Q92692 538 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 EAF2Q96CJ1 260 aaPredicted RBP14.37□□□□□ -0.11
MSH2-201ENST00000233146 DMAP1Q9NPF5 467 aaPredicted RBP14.37□□□□□ -0.11
MSH2-201ENST00000233146 SEC31BQ9NQW1 1179 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 SWAP70Q9UH65 585 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 MAPK8IP1Q9UQF2 711 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 NFS1Q9Y697 457 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 ATP6V1C1P21283 382 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 GUCY2FP51841 1108 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 PPARDQ03181 441 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 TTC39AQ5SRH9 613 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 CACNA2D4Q7Z3S7 1137 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 SUN2Q9UH99 717 aa14.37□□□□□ -0.11
MSH2-201ENST00000233146 LIMA1Q9UHB6 759 aaKnown RBP14.37□□□□□ -0.11
MSH2-201ENST00000233146 GOLGA6L10A0A0M3HER8 536 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 A8MUI8 341 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 ASAP2O43150 1006 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 CD44P16070 742 aaKnown RBP14.36□□□□□ -0.11
MSH2-201ENST00000233146 GNAZP19086 355 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 RPL13P26373 211 aaKnown RBP14.36□□□□□ -0.11
MSH2-201ENST00000233146 TMEM154Q6P9G4 183 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 TRPM8Q7Z2W7 1104 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 CCDC155Q8N6L0 562 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 RPS6KC1Q96S38 1066 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 NDNQ99608 321 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 DNAJC7Q99615 494 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 CWC25Q9NXE8 425 aaPredicted RBP14.36□□□□□ -0.11
MSH2-201ENST00000233146 RARAP10276 462 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 CCT6AP40227 531 aaKnown RBP14.36□□□□□ -0.11
MSH2-201ENST00000233146 STX17P56962 302 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 PABPC4Q13310 644 aaKnown RBP eCLIP14.36□□□□□ -0.113e-13■□□□□ 10.3
MSH2-201ENST00000233146 KRT31Q15323 416 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 ENOX2Q16206 610 aaKnown RBP14.36□□□□□ -0.11
MSH2-201ENST00000233146 Q4G0T1 1027 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 FAM133BQ5BKY9 247 aaKnown RBP14.36□□□□□ -0.11
MSH2-201ENST00000233146 WDR59Q6PJI9 974 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 SERTAD1Q9UHV2 236 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 DUSP10Q9Y6W6 482 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 DLC1Q96QB1 1528 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 SH2B2O14492 632 aaPredicted RBP14.36□□□□□ -0.11
MSH2-201ENST00000233146 RRS1Q15050 365 aaKnown RBP14.36□□□□□ -0.11
MSH2-201ENST00000233146 AGBL2Q5U5Z8 902 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 SFMBT2Q5VUG0 894 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 KCNV2Q8TDN2 545 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 FGD4Q96M96 766 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 EPB41L5Q9HCM4 733 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 TMCO1Q9UM00 188 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 GMEB1Q9Y692 573 aa14.36□□□□□ -0.11
MSH2-201ENST00000233146 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.36□□□□□ -0.11
MSH2-201ENST00000233146 IGF2BP3O00425 579 aaKnown RBP eCLIP14.35□□□□□ -0.11
MSH2-201ENST00000233146 TPD52L2O43399 206 aaKnown RBP14.35□□□□□ -0.11
MSH2-201ENST00000233146 ZNF24P17028 368 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 KLC1Q07866 573 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 ERMARDQ5T6L9 678 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 GRAMD1CQ8IYS0 662 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 IFT81Q8WYA0 676 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 CENPTQ96BT3 561 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 ZNF317Q96PQ6 595 aaPredicted RBP14.35□□□□□ -0.11
MSH2-201ENST00000233146 CCDC8Q9H0W5 538 aaPredicted RBP14.35□□□□□ -0.11
MSH2-201ENST00000233146 RBM12Q9NTZ6 932 aaKnown RBP14.35□□□□□ -0.11
MSH2-201ENST00000233146 PTPRMP28827 1452 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 WFS1O76024 890 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 KRT16P08779 473 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 PARP1P09874 1014 aaKnown RBP14.35□□□□□ -0.11
MSH2-201ENST00000233146 EIF4BP23588 611 aaKnown RBP14.35□□□□□ -0.11
MSH2-201ENST00000233146 FOXB2Q5VYV0 432 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 LINS1Q8NG48 757 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 SMARCAL1Q9NZC9 954 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 PA2G4Q9UQ80 394 aaKnown RBP14.35□□□□□ -0.11
MSH2-201ENST00000233146 PDHA1P08559 390 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 TCP1P17987 556 aaKnown RBP14.35□□□□□ -0.11
MSH2-201ENST00000233146 RFC5P40937 340 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 EFCAB2Q5VUJ9 269 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 RUFY4Q6ZNE9 571 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 SESTD1Q86VW0 696 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 FAM114A1Q8IWE2 563 aa14.35□□□□□ -0.11
MSH2-201ENST00000233146 FBXL16Q8N461 479 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms