RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 LRRC2Q9BYS8 371 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 DISC1Q9NRI5 854 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 DACT1Q9NYF0 836 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 FER1L4A9Z1Z3 1794 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 FAM25EA8MYX2 175 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 JAK2O60674 1132 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 HSPA2P54652 639 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 CEBPZQ03701 1054 aaKnown RBP9.28□□□□□ -0.92
SPARC-201ENST00000231061 ERMNQ8TAM6 284 aa9.28□□□□□ -0.92
SPARC-201ENST00000231061 SPDYE3A6NKU9 549 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 TMOD1P28289 359 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 NCBP1Q09161 790 aaKnown RBP9.27□□□□□ -0.93
SPARC-201ENST00000231061 HAUS7Q99871 368 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 KDM3BQ7LBC6 1761 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 C2orf81A6NN90 581 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 SART1O43290 800 aaKnown RBP9.27□□□□□ -0.93
SPARC-201ENST00000231061 CHGBP05060 677 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 MAN1A1P33908 653 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 POU5F1BQ06416 359 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 TYRO3Q06418 890 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 PDIA6Q15084 440 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 GOT1L1Q8NHS2 421 aaPredicted RBP9.27□□□□□ -0.93
SPARC-201ENST00000231061 FRS2Q8WU20 508 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 SLC35B4Q969S0 331 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 CNNM2Q9H8M5 875 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 AVENQ9NQS1 362 aaPredicted RBP9.27□□□□□ -0.93
SPARC-201ENST00000231061 RTEL1Q9NZ71 1219 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 HMG20BQ9P0W2 317 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.27□□□□□ -0.93
SPARC-201ENST00000231061 RGPD2P0DJD1 1756 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 OPA1O60313 960 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 TOB2Q14106 344 aaPredicted RBP9.27□□□□□ -0.93
SPARC-201ENST00000231061 CCDC121Q6ZUS5 278 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 LUZP1Q86V48 1076 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 SEC62Q99442 399 aaKnown RBP9.27□□□□□ -0.93
SPARC-201ENST00000231061 EIF2AK1Q9BQI3 630 aaKnown RBP9.27□□□□□ -0.93
SPARC-201ENST00000231061 ALG1Q9BT22 464 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 METTL22Q9BUU2 404 aaPredicted RBP9.27□□□□□ -0.93
SPARC-201ENST00000231061 SCAND2PQ9GZW5 306 aaPredicted RBP9.27□□□□□ -0.93
SPARC-201ENST00000231061 SLC52A2Q9HAB3 445 aa9.27□□□□□ -0.93
SPARC-201ENST00000231061 DBNLQ9UJU6 430 aaKnown RBP9.27□□□□□ -0.93
SPARC-201ENST00000231061 NEK2P51955 445 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 CUL4BQ13620 913 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 KRT32Q14532 448 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 KCNB1Q14721 858 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 TNIP1Q15025 636 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 TNNI3KQ59H18 835 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 SH2D4BQ5SQS7 431 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 Q6ZUG5 572 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 FBXO18Q8NFZ0 1043 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 FAM200AQ8TCP9 573 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 SGCDQ92629 289 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 BRF1Q92994 677 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 CDK5RAP3Q96JB5 506 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 CLMNQ96JQ2 1002 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 TBCBQ99426 244 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 DBNDD2Q9BQY9 259 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 FUCA2Q9BTY2 467 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 NACAP1Q9BZK3 213 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 VCX3BQ9H321 246 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 VCPKMTQ9H867 229 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 CASS4Q9NQ75 786 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 PSD3Q9NYI0 1048 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 SEPT10Q9P0V9 454 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 FPGT-TNNI3KV9GXZ4 949 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 A0A087WZG4 1122 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 NDUFAB1O14561 156 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 TBX3O15119 743 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 AP5Z1O43299 807 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 PPP1R12BO60237 982 aaPredicted RBP9.26□□□□□ -0.93
SPARC-201ENST00000231061 KLHL41O60662 606 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 TAF5LO75529 589 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 KIF5BP33176 963 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 SCRN1Q12765 414 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 ANO6Q4KMQ2 910 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 THOC7Q6I9Y2 204 aaKnown RBP9.26□□□□□ -0.93
SPARC-201ENST00000231061 IQCEQ6IPM2 695 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 DHTKD1Q96HY7 919 aaPredicted RBP9.26□□□□□ -0.93
SPARC-201ENST00000231061 GLT8D2Q9H1C3 349 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 TIMM22Q9Y584 194 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 BHMG1C9JSJ3 638 aaPredicted RBP9.26□□□□□ -0.93
SPARC-201ENST00000231061 P4HA2O15460 535 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 KDM1AO60341 852 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 RTN2O75298 545 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 GNALP38405 381 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 BBS9Q3SYG4 887 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 CDCA2Q69YH5 1023 aaPredicted RBP9.26□□□□□ -0.93
SPARC-201ENST00000231061 KIAA1328Q86T90 577 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 TRIM50Q86XT4 487 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 SLAIN1Q8ND83 568 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 RIC8AQ9NPQ8 531 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 MKL2Q9ULH7 1088 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.26□□□□□ -0.93
SPARC-201ENST00000231061 USP16Q9Y5T5 823 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 BZW2Q9Y6E2 419 aaKnown RBP9.26□□□□□ -0.93
SPARC-201ENST00000231061 UTYO14607 1347 aa9.26□□□□□ -0.93
SPARC-201ENST00000231061 GTPBP10A4D1E9 387 aaKnown RBP9.25□□□□□ -0.93
SPARC-201ENST00000231061 PCP11498 1178 aaKnown RBP9.25□□□□□ -0.93
SPARC-201ENST00000231061 RPL13P26373 211 aaKnown RBP9.25□□□□□ -0.93
SPARC-201ENST00000231061 SCNN1DP51172 638 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms