RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 SYMPKQ92797 1274 aaKnown RBP12.64□□□□□ -0.39
LAMA4-201ENST00000230538 MIS12Q9H081 205 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 HESX1Q9UBX0 185 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 SCNN1DP51172 638 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 MUM1L1Q5H9M0 696 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 ZBTB38Q8NAP3 1195 aaPredicted RBP12.64□□□□□ -0.39
LAMA4-201ENST00000230538 HINFPQ9BQA5 517 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 METTL14Q9HCE5 456 aaKnown RBP12.64□□□□□ -0.39
LAMA4-201ENST00000230538 APBA3O96018 575 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 KRT3P12035 628 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 RBBP5Q15291 538 aaKnown RBP12.64□□□□□ -0.39
LAMA4-201ENST00000230538 LRRC24Q50LG9 513 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 SESTD1Q86VW0 696 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 NME8Q8N427 588 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
LAMA4-201ENST00000230538 TACO1Q9BSH4 297 aaKnown RBP12.64□□□□□ -0.39
LAMA4-201ENST00000230538 ZBTB24O43167 697 aaPredicted RBP12.64□□□□□ -0.39
LAMA4-201ENST00000230538 GSTA1P08263 222 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 GSTA2P09210 222 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 TMEM191BP0C7N4 346 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 ATP1A2P50993 1020 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 POLGP54098 1239 aaPredicted RBP12.64□□□□□ -0.39
LAMA4-201ENST00000230538 GOLGA8FQ08AF8 430 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 GOLGA8DPQ0D2H9 430 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 SPATA1Q5VX52 437 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 RINT1Q6NUQ1 792 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 LONP1P36776 959 aaKnown RBP12.64□□□□□ -0.39
LAMA4-201ENST00000230538 BFSP1Q12934 665 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 POLA2Q14181 598 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 KRT26Q7Z3Y9 468 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 HVCN1Q96D96 273 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 TRIM56Q9BRZ2 755 aaKnown RBP12.64□□□□□ -0.39
LAMA4-201ENST00000230538 USP44Q9H0E7 712 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 VCX3AQ9NNX9 186 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 ANKFY1Q9P2R3 1169 aa12.64□□□□□ -0.39
LAMA4-201ENST00000230538 TRIM37O94972 964 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 TCP1P17987 556 aaKnown RBP12.63□□□□□ -0.39
LAMA4-201ENST00000230538 FAM71BQ8TC56 605 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 SUGCTQ9HAC7 445 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 RABGAP1Q9Y3P9 1069 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 CFAP65Q6ZU64 1925 aaKnown RBP12.63□□□□□ -0.39
LAMA4-201ENST00000230538 RBM6P78332 1123 aaKnown RBP12.63□□□□□ -0.39
LAMA4-201ENST00000230538 ICA1Q05084 483 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 EFCAB8A8MWE9 144 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 DOK7Q18PE1 504 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 PHLDB3Q6NSJ2 640 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 SSH3Q8TE77 659 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 EAF2Q96CJ1 260 aaPredicted RBP12.63□□□□□ -0.39
LAMA4-201ENST00000230538 CAPS2Q9BXY5 557 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 USP21Q9UK80 565 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 M0R2C6 588 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 SAT1P21673 171 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 GARSP41250 739 aaKnown RBP12.63□□□□□ -0.39
LAMA4-201ENST00000230538 MYL7Q01449 175 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 BBOF1Q8ND07 529 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 CCDC127Q96BQ5 260 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 FAM193BQ96PV7 902 aaPredicted RBP12.63□□□□□ -0.39
LAMA4-201ENST00000230538 CAPN7Q9Y6W3 813 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 PFDN6O15212 129 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 TTC19Q6DKK2 380 aaPredicted RBP12.63□□□□□ -0.39
LAMA4-201ENST00000230538 NCAPG2Q86XI2 1143 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 ANKRD35Q8N283 1001 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 TAB3Q8N5C8 712 aaPredicted RBP12.63□□□□□ -0.39
LAMA4-201ENST00000230538 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.63□□□□□ -0.39
LAMA4-201ENST00000230538 PPP1R13BQ96KQ4 1090 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 GBP5Q96PP8 586 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 HAUS4Q9H6D7 363 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 RNF123Q5XPI4 1314 aa12.63□□□□□ -0.39
LAMA4-201ENST00000230538 LRRIQ4A6NIV6 560 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 BAG2O95816 211 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 POLR2BP30876 1174 aaKnown RBP12.62□□□□□ -0.39
LAMA4-201ENST00000230538 PDE1CQ14123 709 aaPredicted RBP12.62□□□□□ -0.39
LAMA4-201ENST00000230538 ZSCAN26Q16670 478 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 DCAF15Q66K64 600 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 KSR1Q8IVT5 923 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 LSG1Q9H089 658 aaKnown RBP12.62□□□□□ -0.39
LAMA4-201ENST00000230538 PYCARDQ9ULZ3 195 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 PSDA5PKW4 1024 aaPredicted RBP12.62□□□□□ -0.39
LAMA4-201ENST00000230538 FGAP02671 866 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 PTGDRQ13258 359 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 UHMK1Q8TAS1 419 aaKnown RBP12.62□□□□□ -0.39
LAMA4-201ENST00000230538 BTBD18B2RXH4 712 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 H2AFZP0C0S5 128 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 H2AFVQ71UI9 128 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 CHRNDQ07001 517 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 PTPN21Q16825 1174 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 FAM160B1Q5W0V3 765 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 TTLL7Q6ZT98 887 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 POMGNT1Q8WZA1 660 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 PASKQ96RG2 1323 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 FAM135BQ49AJ0 1406 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 ZNF500O60304 480 aaPredicted RBP12.62□□□□□ -0.39
LAMA4-201ENST00000230538 PDIA3P30101 505 aaKnown RBP12.62□□□□□ -0.39
LAMA4-201ENST00000230538 NSFP46459 744 aaKnown RBP12.62□□□□□ -0.39
LAMA4-201ENST00000230538 ARHGAP4P98171 946 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 FAM26FQ5R3K3 315 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 CCDC68Q9H2F9 335 aa12.62□□□□□ -0.39
LAMA4-201ENST00000230538 NRBP2Q9NSY0 501 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms