RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 CTDP1Q9Y5B0 961 aaPredicted RBP13.81□□□□□ -0.2
FRG1-201ENST00000226798 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.8□□□□□ -0.2
FRG1-201ENST00000226798 GPAA1O43292 621 aa13.8□□□□□ -0.2
FRG1-201ENST00000226798 SMARCA5O60264 1052 aaPredicted RBP13.8□□□□□ -0.2
FRG1-201ENST00000226798 PRDM1O75626 825 aa13.8□□□□□ -0.2
FRG1-201ENST00000226798 TTLL1O95922 423 aa13.8□□□□□ -0.2
FRG1-201ENST00000226798 FDX1P10109 184 aa13.8□□□□□ -0.2
FRG1-201ENST00000226798 BEX3Q00994 111 aa13.8□□□□□ -0.2
FRG1-201ENST00000226798 RAB30Q15771 203 aa13.8□□□□□ -0.2
FRG1-201ENST00000226798 VTI1AQ96AJ9 217 aa13.8□□□□□ -0.2
FRG1-201ENST00000226798 ACAD9Q9H845 621 aa13.8□□□□□ -0.2
FRG1-201ENST00000226798 A1CFQ9NQ94 594 aaKnown RBP13.8□□□□□ -0.2
FRG1-201ENST00000226798 HOMER2Q9NSB8 354 aa13.8□□□□□ -0.2
FRG1-201ENST00000226798 ECHDC1Q9NTX5 307 aa13.8□□□□□ -0.2
FRG1-201ENST00000226798 THEGQ9P2T0 379 aa13.8□□□□□ -0.2
FRG1-201ENST00000226798 GNEQ9Y223 722 aaKnown RBP13.8□□□□□ -0.2
FRG1-201ENST00000226798 ZNF536O15090 1300 aa13.8□□□□□ -0.2
FRG1-201ENST00000226798 SOWAHBA6NEL2 793 aa13.79□□□□□ -0.2
FRG1-201ENST00000226798 BMP3P12645 472 aa13.79□□□□□ -0.2
FRG1-201ENST00000226798 TDO2P48775 406 aa13.79□□□□□ -0.2
FRG1-201ENST00000226798 TNFAIP2Q03169 654 aa13.79□□□□□ -0.2
FRG1-201ENST00000226798 CXCL17Q6UXB2 119 aa13.79□□□□□ -0.2
FRG1-201ENST00000226798 ASB2Q96Q27 587 aa13.79□□□□□ -0.2
FRG1-201ENST00000226798 HIPK3Q9H422 1215 aa13.79□□□□□ -0.2
FRG1-201ENST00000226798 ZNF287Q9HBT7 754 aa13.79□□□□□ -0.2
FRG1-201ENST00000226798 GRIN2DO15399 1336 aa13.79□□□□□ -0.2
FRG1-201ENST00000226798 UMODL1Q5DID0 1318 aa13.79□□□□□ -0.2
FRG1-201ENST00000226798 TANC1Q9C0D5 1861 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 M0R2C6 588 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 RNF113AO15541 343 aaKnown RBP13.78□□□□□ -0.2
FRG1-201ENST00000226798 CABYRO75952 493 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 ZFYP08048 801 aaPredicted RBP13.78□□□□□ -0.2
FRG1-201ENST00000226798 GNAT2P19087 354 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 STAT2P52630 851 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 FSCN1Q16658 493 aaKnown RBP13.78□□□□□ -0.2
FRG1-201ENST00000226798 SLFN13Q68D06 897 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 TLK2Q86UE8 772 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 ZNF444Q8N0Y2 327 aaPredicted RBP13.78□□□□□ -0.2
FRG1-201ENST00000226798 NEDD1Q8NHV4 660 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 PPM1EQ8WY54 764 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 GMCL1Q96IK5 515 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 NOC4LQ9BVI4 516 aaKnown RBP13.78□□□□□ -0.2
FRG1-201ENST00000226798 WNT8AQ9H1J5 351 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 MTIF3Q9H2K0 278 aaKnown RBP13.78□□□□□ -0.2
FRG1-201ENST00000226798 CHMP4BQ9H444 224 aaKnown RBP13.78□□□□□ -0.2
FRG1-201ENST00000226798 RNF146Q9NTX7 359 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 MSRAQ9UJ68 235 aa13.78□□□□□ -0.2
FRG1-201ENST00000226798 YBX2Q9Y2T7 364 aaKnown RBP13.78□□□□□ -0.2
FRG1-201ENST00000226798 ASB14A6NK59 587 aa13.77□□□□□ -0.21
FRG1-201ENST00000226798 TMEM232C9JQI7 657 aa13.77□□□□□ -0.21
FRG1-201ENST00000226798 COL9A1P20849 921 aa13.77□□□□□ -0.21
FRG1-201ENST00000226798 PTGS1P23219 599 aa13.77□□□□□ -0.21
FRG1-201ENST00000226798 ITGA7Q13683 1181 aa13.77□□□□□ -0.21
FRG1-201ENST00000226798 SCN5AQ14524 2016 aa13.77□□□□□ -0.21
FRG1-201ENST00000226798 ADAMTS19Q8TE59 1207 aa13.77□□□□□ -0.21
FRG1-201ENST00000226798 VWCEQ96DN2 955 aa13.77□□□□□ -0.21
FRG1-201ENST00000226798 AGBL1Q96MI9 1066 aa13.77□□□□□ -0.21
FRG1-201ENST00000226798 SEZ6LQ9BYH1 1024 aa13.77□□□□□ -0.21
FRG1-201ENST00000226798 NKX2-4Q9H2Z4 354 aa13.77□□□□□ -0.21
FRG1-201ENST00000226798 SCN10AQ9Y5Y9 1956 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 B4GALT4O60513 344 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 PLA2G6O60733 806 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 FGBP02675 491 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 TSPY3P0CV98 308 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 TSPY8P0CW00 308 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 SMPD1P17405 629 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 MRPS5P82675 430 aaKnown RBP13.76□□□□□ -0.21
FRG1-201ENST00000226798 TKFCQ3LXA3 575 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 TSHZ3Q63HK5 1081 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 TAPT1Q6NXT6 567 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 OTOP2Q7RTS6 562 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 FAM160B2Q86V87 743 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 IFNL3Q8IZI9 196 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 TRPV6Q9H1D0 765 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 SLC28A3Q9HAS3 691 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 PLSCR2Q9NRY7 297 aa13.76□□□□□ -0.21
FRG1-201ENST00000226798 DDX49Q9Y6V7 483 aaKnown RBP13.76□□□□□ -0.21
FRG1-201ENST00000226798 PRRC2BQ5JSZ5 2229 aaKnown RBP13.76□□□□□ -0.21
FRG1-201ENST00000226798 TCF20Q9UGU0 1960 aaKnown RBP13.76□□□□□ -0.21
FRG1-201ENST00000226798 PATL2C9JE40 543 aaKnown RBP13.75□□□□□ -0.21
FRG1-201ENST00000226798 APPP05067 770 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 TIE1P35590 1138 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 CCL23P55773 120 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 PDE4BQ07343 736 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 CCDC85BQ15834 202 aaPredicted RBP13.75□□□□□ -0.21
FRG1-201ENST00000226798 TMEM63BQ5T3F8 832 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 NOL8Q76FK4 1167 aaKnown RBP13.75□□□□□ -0.21
FRG1-201ENST00000226798 FBXO16Q8IX29 292 aaPredicted RBP13.75□□□□□ -0.21
FRG1-201ENST00000226798 MORC4Q8TE76 937 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 CHURC1Q8WUH1 139 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 STAG1Q8WVM7 1258 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 GPATCH3Q96I76 525 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 TRERF1Q96PN7 1200 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 UHRF1Q96T88 793 aaPredicted RBP13.75□□□□□ -0.21
FRG1-201ENST00000226798 AP5M1Q9H0R1 490 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 PDGFCQ9NRA1 345 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 CYP39A1Q9NYL5 469 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 Q9Y3F1 56 aa13.75□□□□□ -0.21
FRG1-201ENST00000226798 DYNC1LI2O43237 492 aaPredicted RBP13.74□□□□□ -0.21
FRG1-201ENST00000226798 ALAS1P13196 640 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms