RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 HOMER2Q9NSB8 354 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 CCDC88AQ3V6T2 1871 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 DCAF8L1A6NGE4 600 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 SFPQP23246 707 aaKnown RBP eCLIP13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 FAM83AQ86UY5 434 aa13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 MRPS27Q92552 414 aaKnown RBP13.24□□□□□ -0.29
TNFAIP1-201ENST00000226225 VWA3AA6NCI4 1184 aa13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 CAP2P40123 477 aa13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 NT5C2P49902 561 aa13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 FUT2Q10981 343 aa13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 TTC38Q5R3I4 469 aa13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 RTEL1Q9NZ71 1219 aa13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 NYAP2Q9P242 653 aa13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 ZHX2Q9Y6X8 837 aa13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 TAL1P17542 331 aaPredicted RBP13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 BMS1Q14692 1282 aaKnown RBP13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 UBE2SQ16763 222 aa13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 REXO1Q8N1G1 1221 aaKnown RBP13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 ANKS1AQ92625 1134 aa13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 SH2D4AQ9H788 454 aa13.23□□□□□ -0.29
TNFAIP1-201ENST00000226225 A0A1W2PRG0 241 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 SCN9AQ15858 1988 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 DPCR1Q3MIW9 517 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 EARS2Q5JPH6 523 aaKnown RBP13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 TEX35Q5T0J7 233 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 ATL3Q6DD88 541 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 TYW1BQ6NUM6 668 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 TMCO3Q6UWJ1 677 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 CARD6Q9BX69 1037 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 CALCOCO1Q9P1Z2 691 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 PCDHA4Q9UN74 947 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 NRXN2Q9P2S2 1712 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 CCNT1O60563 726 aaKnown RBP13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 ADCY7P51828 1080 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 STAT2P52630 851 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 CDC37Q16543 378 aaPredicted RBP13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 TATDN1Q6P1N9 297 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 NYAP1Q6ZVC0 841 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 DHX40Q8IX18 779 aaKnown RBP13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 PPP1R13BQ96KQ4 1090 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 PHF20Q9BVI0 1012 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 PSTPIP2Q9H939 334 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 JMJD4Q9H9V9 463 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 FBXO28Q9NVF7 368 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 BARHL2Q9NY43 387 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 SNED1Q8TER0 1413 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 ELP1O95163 1332 aa13.22□□□□□ -0.29
TNFAIP1-201ENST00000226225 PPP1R12BO60237 982 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 YEATS4O95619 227 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 CFBP00751 764 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 NF2P35240 595 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 SYKP43405 635 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 DGKZQ13574 1117 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 SUPT20HL1Q3ZLR7 823 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 E4F1Q66K89 784 aaPredicted RBP13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 APOBEC3FQ8IUX4 373 aaKnown RBP13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 KRI1Q8N9T8 703 aaKnown RBP13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 POLR3EQ9NVU0 708 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 ANO10Q9NW15 660 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 TMEM260Q9NX78 707 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 FLOT1O75955 427 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 CAPN2P17655 700 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 ZNF76P36508 570 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 MRPL12P52815 198 aaKnown RBP13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 PLS1Q14651 629 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 SLC39A14Q15043 492 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 QRICH1Q2TAL8 776 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 PLIN2Q99541 437 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 SPZ1Q9BXG8 430 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 CASZ1Q86V15 1759 aa13.21□□□□□ -0.29
TNFAIP1-201ENST00000226225 DOCK2Q92608 1830 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 USP17L15C9J2P7 530 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 USP17L13C9JLJ4 530 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 ADM5C9JUS6 153 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 USP17L11C9JVI0 530 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 USP17L18D6R9N7 530 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 USP17L22D6RA61 530 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 USP17L17D6RBQ6 530 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 USP17L19D6RCP7 530 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 USP17L20D6RJB6 530 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 PNMA6AP0CW24 399 aaPredicted RBP13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 CDC25AP30304 524 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 ZNF280AP59817 542 aaPredicted RBP13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 USP17L24Q0WX57 530 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 PTGDRQ13258 359 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 DHX8Q14562 1220 aaKnown RBP13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 USP17L6PQ6QN14 398 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 C10orf67Q8IYJ2 551 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 LTBP3Q9NS15 1303 aa13.21□□□□□ -0.3
TNFAIP1-201ENST00000226225 PNMA6FA0A0J9YX94 578 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 NPM3O75607 178 aaKnown RBP13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 MTMR2Q13614 643 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 SYDE2Q5VT97 1194 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 FKBP1CQ5VVH2 108 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 KRBA2Q6ZNG9 492 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 FBXO11Q86XK2 927 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 ZBTB5O15062 677 aa13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 ECM2O94769 699 aaPredicted RBP13.2□□□□□ -0.3
TNFAIP1-201ENST00000226225 NDUFA8P51970 172 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms