RNA–Protein interactions for RNA: ENST00000223061.5

PCOLCE-201, Transcript of procollagen C-endopeptidase enhancer, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCOLCE, Length 1,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-201ENST00000223061 RTN1Q16799 776 aa17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 NSMFQ6X4W1 530 aa17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 FBXO11Q86XK2 927 aa17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 TRMT44Q8IYL2 757 aaKnown RBP17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 FBXL16Q8N461 479 aa17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 CCDC82Q8N4S0 544 aa17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 SRBD1Q8N5C6 995 aaKnown RBP17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 MTMR8Q96EF0 704 aa17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 LARP6Q9BRS8 491 aaKnown RBP17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 A1CFQ9NQ94 594 aaKnown RBP17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 DOCK3Q8IZD9 2030 aa17.05■□□□□ 0.32
PCOLCE-201ENST00000223061 ZBTB5O15062 677 aa17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 TOB2Q14106 344 aaPredicted RBP17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 MTFR1Q15390 333 aa17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 TMTC3Q6ZXV5 915 aa17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 CLEC4DQ8WXI8 215 aa17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 SPZ1Q9BXG8 430 aa17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 AGXT2Q9BYV1 514 aa17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 PPP1R11O60927 126 aaPredicted RBP17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 METAP2P50579 478 aaKnown RBP eCLIP17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 ZNF792Q3KQV3 632 aa17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 RRP36Q96EU6 259 aaKnown RBP17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 MAML3Q96JK9 1138 aa17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 AMNQ9BXJ7 453 aa17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 RBM28Q9NW13 759 aaKnown RBP17.04■□□□□ 0.32
PCOLCE-201ENST00000223061 ZNF236Q9UL36 1845 aa17.03■□□□□ 0.32
PCOLCE-201ENST00000223061 DNAJC25-GNG10A0A024R161 153 aa17.03■□□□□ 0.32
PCOLCE-201ENST00000223061 PRKAR2AP13861 404 aaKnown RBP17.03■□□□□ 0.32
PCOLCE-201ENST00000223061 CYP2C19P33261 490 aa17.03■□□□□ 0.32
PCOLCE-201ENST00000223061 MFSD14CQ5VZR4 134 aa17.03■□□□□ 0.32
PCOLCE-201ENST00000223061 C22orf23Q9BZE7 217 aa17.03■□□□□ 0.32
PCOLCE-201ENST00000223061 PFASO15067 1338 aa17.03■□□□□ 0.32
PCOLCE-201ENST00000223061 ABCB11O95342 1321 aa17.03■□□□□ 0.32
PCOLCE-201ENST00000223061 PNMA6FA0A0J9YX94 578 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 PTPDC1A2A3K4 754 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 POTEB2H3BUK9 544 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 CCL5P13501 91 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 SMARCA1P28370 1054 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 CDC27P30260 824 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 RCAN1P53805 252 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 SOX10P56693 466 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 CNTN2Q02246 1040 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 IL17RAQ96F46 866 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 UNC93B1Q9H1C4 597 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 UPF2Q9HAU5 1272 aaKnown RBP17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 CYP39A1Q9NYL5 469 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 SEC63Q9UGP8 760 aaKnown RBP17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 PCDHA1Q9Y5I3 950 aa17.02■□□□□ 0.32
PCOLCE-201ENST00000223061 hCG_1642624A0A1W2PR95 340 aa17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 CACNB2Q08289 660 aaPredicted RBP17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 BAATQ14032 418 aaPredicted RBP17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 OLFML2BQ68BL8 750 aa17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 SLC30A10Q6XR72 485 aa17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 RNF208Q9H0X6 261 aa17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 FAM217BQ9NTX9 383 aaPredicted RBP17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 DIS3Q9Y2L1 958 aaKnown RBP17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 MRPL11Q9Y3B7 192 aaKnown RBP17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 CALML3P27482 149 aa17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 PDIA3P30101 505 aaKnown RBP17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 ADD1P35611 737 aaKnown RBP17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 RNF207Q6ZRF8 634 aa17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 PURBQ96QR8 312 aaKnown RBP17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 TMEM106CQ9BVX2 250 aa17.01■□□□□ 0.31
PCOLCE-201ENST00000223061 NEK4P51957 841 aa17■□□□□ 0.31
PCOLCE-201ENST00000223061 EVCP57679 992 aa17■□□□□ 0.31
PCOLCE-201ENST00000223061 CCT2P78371 535 aaKnown RBP17■□□□□ 0.31
PCOLCE-201ENST00000223061 MAP3K21Q5TCX8 1036 aa17■□□□□ 0.31
PCOLCE-201ENST00000223061 NOL8Q76FK4 1167 aaKnown RBP17■□□□□ 0.31
PCOLCE-201ENST00000223061 FAM133AQ8N9E0 248 aa17■□□□□ 0.31
PCOLCE-201ENST00000223061 CCDC196A0A1B0GTZ2 297 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 SOWAHBA6NEL2 793 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 CCND3P30281 292 aaPredicted RBP16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 AK2P54819 239 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 RPS6P62753 249 aaKnown RBP16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 STK3Q13188 491 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 TBC1D5Q92609 795 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 FGD4Q96M96 766 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 TINF2Q9BSI4 451 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 NCOA5Q9HCD5 579 aaKnown RBP16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 HMX1Q9NP08 348 aaPredicted RBP16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 CNTNAP5Q8WYK1 1306 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 IGHA2P01877 340 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 RBM25P49756 843 aaKnown RBP16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 FUT2Q10981 343 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 TRAF1Q13077 416 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 PPP2R5BQ15173 497 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 PRAMEF19Q5SWL8 479 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 MCF2L2Q86YR7 1114 aa16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.99■□□□□ 0.31
PCOLCE-201ENST00000223061 RPTORQ8N122 1335 aa16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 NID2Q14112 1375 aa16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 POTEFA5A3E0 1075 aa16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 CFBP00751 764 aa16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 CNGA1P29973 690 aa16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 ZNF467Q7Z7K2 595 aaPredicted RBP16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 RGS22Q8NE09 1264 aa16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 TRPV1Q8NER1 839 aa16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 ZNF274Q96GC6 653 aaPredicted RBP16.98■□□□□ 0.31
PCOLCE-201ENST00000223061 KIF2CQ99661 725 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms