RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 FCER1AP12319 257 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 CARSP49589 748 aaKnown RBP22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 POTEDQ86YR6 584 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 RNPC3Q96LT9 517 aaKnown RBP22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 PCDHA13Q9Y5I0 950 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 FAM153BP0C7A2 387 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 FAM153CQ494X1 144 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 SUGP1Q8IWZ8 645 aaKnown RBP22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 FAM153AQ9UHL3 310 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 MAGEB6P1A0A0J9YX57 407 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 FAM170AA1A519 330 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 CPP00450 1065 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 EEF1GP26641 437 aaKnown RBP22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 ZBED6P86452 979 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 SEC23AQ15436 765 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 ZNF507Q8TCN5 953 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 ALS2CR12Q96Q35 445 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 DISC1Q9NRI5 854 aa22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 PACSIN2Q9UNF0 486 aaPredicted RBP22.34■■□□□ 1.17
PPP1R3F-201ENST00000055335 CCDC194A0A1B0GVG4 234 aa22.33■■□□□ 1.17
PPP1R3F-201ENST00000055335 MAGEA1P43355 309 aa22.33■■□□□ 1.17
PPP1R3F-201ENST00000055335 HLTFQ14527 1009 aaKnown RBP eCLIP22.33■■□□□ 1.17
PPP1R3F-201ENST00000055335 ANKRD40Q6AI12 368 aa22.33■■□□□ 1.17
PPP1R3F-201ENST00000055335 CXorf56Q9H5V9 222 aa22.33■■□□□ 1.17
PPP1R3F-201ENST00000055335 RDXP35241 583 aaKnown RBP22.33■■□□□ 1.16
PPP1R3F-201ENST00000055335 EPHB4P54760 987 aa22.33■■□□□ 1.16
PPP1R3F-201ENST00000055335 INF2Q27J81 1249 aa22.33■■□□□ 1.16
PPP1R3F-201ENST00000055335 GIGYF2Q6Y7W6 1299 aaKnown RBP22.33■■□□□ 1.16
PPP1R3F-201ENST00000055335 RGPD5Q99666 1765 aa22.33■■□□□ 1.16
PPP1R3F-201ENST00000055335 E7EVH7 732 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 GNAT2P19087 354 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 CEP57Q86XR8 500 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 SLC39A2Q9NP94 309 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 NLRC4Q9NPP4 1024 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 MYH10P35580 1976 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 WTIPA6NIX2 430 aaPredicted RBP22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 SRGNP10124 158 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 KIF11P52732 1056 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 TRADDQ15628 312 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 NOC3LQ8WTT2 800 aaKnown RBP22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 TMEM60Q9H2L4 133 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 USP17L12C9JPN9 530 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 USP17L21D6R901 530 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 EPHB6O15197 1021 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 SCG2P13521 617 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 NPY5RQ15761 445 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 GBP6Q6ZN66 633 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 JAG2Q9Y219 1238 aa22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 PDS5AQ29RF7 1337 aaKnown RBP22.32■■□□□ 1.16
PPP1R3F-201ENST00000055335 ANO9A1A5B4 782 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 STARD3NLO95772 234 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 ACTN3Q08043 901 aaPredicted RBP22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 STK4Q13043 487 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 KLHL7Q8IXQ5 586 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 A0A1W2PQC6 194 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 RASSF10A6NK89 507 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 GFPT1Q06210 699 aaPredicted RBP22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 HAUS3Q68CZ6 603 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 B4GALNT4Q76KP1 1039 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 CACNA2D4Q7Z3S7 1137 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 MYO5AQ9Y4I1 1855 aaKnown RBP22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 HEXIM1O94992 359 aaKnown RBP22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 FTCDO95954 541 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 GLI1P08151 1106 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 FUT2Q10981 343 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 TROAPQ12815 778 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 CABS1Q96KC9 395 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 HYOU1Q9Y4L1 999 aa22.31■■□□□ 1.16
PPP1R3F-201ENST00000055335 PCDH11XQ9BZA7 1347 aa22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 PCDH11YQ9BZA8 1340 aa22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 ATF3P18847 181 aa22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 TMTC3Q6ZXV5 915 aa22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 CEP89Q96ST8 783 aa22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 PDE8AO60658 829 aa22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 GYG1P46976 350 aa22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 ODF2Q5BJF6 829 aa22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 CCDC170Q8IYT3 715 aa22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 FNBP4Q8N3X1 1017 aaPredicted RBP22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 CCDC155Q8N6L0 562 aa22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 KRT12Q99456 494 aa22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 ARHGAP20Q9P2F6 1191 aa22.3■■□□□ 1.16
PPP1R3F-201ENST00000055335 NAALADL2Q58DX5 795 aa22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 CEP85LQ5SZL2 805 aa22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 THAP9Q9H5L6 903 aa22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 FAM205AQ6ZU69 1335 aa22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 ECM2O94769 699 aaPredicted RBP22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 LSP1P33241 339 aa22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 TTI2Q6NXR4 508 aa22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 SALL4Q9UJQ4 1053 aa22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 SIPA1L3O60292 1781 aaPredicted RBP22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 MMGT1Q8N4V1 131 aa22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 GIMAP7Q8NHV1 300 aa22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 CCDC47Q96A33 483 aaKnown RBP22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 DUSP9Q99956 384 aaKnown RBP22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 NUP58Q9BVL2 599 aa22.29■■□□□ 1.16
PPP1R3F-201ENST00000055335 TSPY2A6NKD2 308 aa22.28■■□□□ 1.16
PPP1R3F-201ENST00000055335 HDLBPQ00341 1268 aaKnown RBP22.28■■□□□ 1.16
PPP1R3F-201ENST00000055335 MEA1Q16626 185 aa22.28■■□□□ 1.16
PPP1R3F-201ENST00000055335 EP400NLQ6ZTU2 488 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms