RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 AOC3Q16853 763 aa29.39■■■□□ 2.3
RTN4R-201ENST00000043402 NELFBQ8WX92 580 aa29.39■■■□□ 2.3
RTN4R-201ENST00000043402 DHX36Q9H2U1 1008 aaKnown RBP29.39■■■□□ 2.29
RTN4R-201ENST00000043402 KMT5BQ4FZB7 885 aa29.38■■■□□ 2.29
RTN4R-201ENST00000043402 GPATCH4Q5T3I0 446 aaKnown RBP29.38■■■□□ 2.29
RTN4R-201ENST00000043402 MTMR9Q96QG7 549 aa29.38■■■□□ 2.29
RTN4R-201ENST00000043402 MMTAG2Q9BU76 263 aaKnown RBP29.38■■■□□ 2.29
RTN4R-201ENST00000043402 CCDC96Q2M329 555 aa29.37■■■□□ 2.29
RTN4R-201ENST00000043402 IGSF22Q8N9C0 903 aa29.37■■■□□ 2.29
RTN4R-201ENST00000043402 USP17L10C9JJH3 530 aa29.37■■■□□ 2.29
RTN4R-201ENST00000043402 ORC2Q13416 577 aaPredicted RBP29.37■■■□□ 2.29
RTN4R-201ENST00000043402 KCNB1Q14721 858 aa29.37■■■□□ 2.29
RTN4R-201ENST00000043402 CNKSR1Q969H4 720 aa29.37■■■□□ 2.29
RTN4R-201ENST00000043402 CTAGE1Q96RT6 745 aa29.37■■■□□ 2.29
RTN4R-201ENST00000043402 BAG1Q99933 345 aaPredicted RBP29.37■■■□□ 2.29
RTN4R-201ENST00000043402 PI4KBQ9UBF8 816 aa29.37■■■□□ 2.29
RTN4R-201ENST00000043402 MYL1P05976 194 aa29.36■■■□□ 2.29
RTN4R-201ENST00000043402 MTERF4Q7Z6M4 381 aaKnown RBP29.36■■■□□ 2.29
RTN4R-201ENST00000043402 MTMR8Q96EF0 704 aa29.36■■■□□ 2.29
RTN4R-201ENST00000043402 RIC8AQ9NPQ8 531 aa29.36■■■□□ 2.29
RTN4R-201ENST00000043402 KIF2AO00139 706 aaPredicted RBP29.36■■■□□ 2.29
RTN4R-201ENST00000043402 ARHGAP6O43182 974 aa29.36■■■□□ 2.29
RTN4R-201ENST00000043402 SLC37A4O43826 429 aa29.36■■■□□ 2.29
RTN4R-201ENST00000043402 TDP2O95551 362 aa29.36■■■□□ 2.29
RTN4R-201ENST00000043402 SLC15A2Q16348 729 aa29.36■■■□□ 2.29
RTN4R-201ENST00000043402 ADSSL1Q8N142 457 aa29.36■■■□□ 2.29
RTN4R-201ENST00000043402 SERPINA10Q9UK55 444 aa29.36■■■□□ 2.29
RTN4R-201ENST00000043402 EEF2P13639 858 aaKnown RBP29.35■■■□□ 2.29
RTN4R-201ENST00000043402 TXKP42681 527 aa29.35■■■□□ 2.29
RTN4R-201ENST00000043402 UBE2SQ16763 222 aa29.35■■■□□ 2.29
RTN4R-201ENST00000043402 CERKLQ49MI3 558 aaPredicted RBP29.35■■■□□ 2.29
RTN4R-201ENST00000043402 PPP1R18Q6NYC8 613 aa29.35■■■□□ 2.29
RTN4R-201ENST00000043402 KIF18AQ8NI77 898 aa29.35■■■□□ 2.29
RTN4R-201ENST00000043402 CUEDC2Q9H467 287 aa29.35■■■□□ 2.29
RTN4R-201ENST00000043402 RGPD3A6NKT7 1758 aaPredicted RBP29.35■■■□□ 2.29
RTN4R-201ENST00000043402 RGPD4Q7Z3J3 1758 aa29.35■■■□□ 2.29
RTN4R-201ENST00000043402 LRRC10BA6NIK2 292 aa29.35■■■□□ 2.29
RTN4R-201ENST00000043402 ZBTB5O15062 677 aa29.35■■■□□ 2.29
RTN4R-201ENST00000043402 RHOBTB3O94955 611 aa29.35■■■□□ 2.29
RTN4R-201ENST00000043402 CLK2P49760 499 aaKnown RBP29.35■■■□□ 2.29
RTN4R-201ENST00000043402 KRT31Q15323 416 aa29.35■■■□□ 2.29
RTN4R-201ENST00000043402 ZSCAN29Q8IWY8 852 aaPredicted RBP29.35■■■□□ 2.29
RTN4R-201ENST00000043402 LIMA1Q9UHB6 759 aaKnown RBP29.35■■■□□ 2.29
RTN4R-201ENST00000043402 STX10O60499 249 aa29.34■■■□□ 2.29
RTN4R-201ENST00000043402 SIAH1Q8IUQ4 282 aa29.34■■■□□ 2.29
RTN4R-201ENST00000043402 REXO1L1PQ8IX06 675 aa29.34■■■□□ 2.29
RTN4R-201ENST00000043402 MKL1Q969V6 931 aa29.34■■■□□ 2.29
RTN4R-201ENST00000043402 CCT6AP40227 531 aaKnown RBP29.33■■■□□ 2.29
RTN4R-201ENST00000043402 EZH2Q15910 746 aaKnown RBP29.33■■■□□ 2.29
RTN4R-201ENST00000043402 CALCRLQ16602 461 aa29.33■■■□□ 2.29
RTN4R-201ENST00000043402 TATDN1Q6P1N9 297 aa29.33■■■□□ 2.29
RTN4R-201ENST00000043402 TRIM49BA6NDI0 452 aa29.33■■■□□ 2.29
RTN4R-201ENST00000043402 PMS1P54277 932 aaKnown RBP29.33■■■□□ 2.29
RTN4R-201ENST00000043402 FCHSD1Q86WN1 690 aa29.33■■■□□ 2.29
RTN4R-201ENST00000043402 MAGEF1Q9HAY2 307 aa29.33■■■□□ 2.29
RTN4R-201ENST00000043402 FILIP1LQ4L180 1135 aa29.32■■■□□ 2.28
RTN4R-201ENST00000043402 SYT10Q6XYQ8 523 aa29.32■■■□□ 2.28
RTN4R-201ENST00000043402 GIMAP8Q8ND71 665 aaPredicted RBP29.32■■■□□ 2.28
RTN4R-201ENST00000043402 TRIM9Q9C026 710 aa29.32■■■□□ 2.28
RTN4R-201ENST00000043402 YDJCA8MPS7 323 aa29.32■■■□□ 2.28
RTN4R-201ENST00000043402 NPM3O75607 178 aaKnown RBP29.32■■■□□ 2.28
RTN4R-201ENST00000043402 TNNI2P48788 182 aa29.32■■■□□ 2.28
RTN4R-201ENST00000043402 RBL2Q08999 1139 aa29.32■■■□□ 2.28
RTN4R-201ENST00000043402 TCP11X2Q5H9J9 407 aa29.32■■■□□ 2.28
RTN4R-201ENST00000043402 TDRD3Q9H7E2 651 aaKnown RBP29.32■■■□□ 2.28
RTN4R-201ENST00000043402 KANSL2Q9H9L4 492 aa29.32■■■□□ 2.28
RTN4R-201ENST00000043402 NYAP2Q9P242 653 aa29.32■■■□□ 2.28
RTN4R-201ENST00000043402 AKR1B15C9JRZ8 316 aaPredicted RBP29.31■■■□□ 2.28
RTN4R-201ENST00000043402 CCP110O43303 1012 aa29.31■■■□□ 2.28
RTN4R-201ENST00000043402 SEPT2Q15019 361 aa29.31■■■□□ 2.28
RTN4R-201ENST00000043402 PPP4R3BQ5MIZ7 849 aa29.31■■■□□ 2.28
RTN4R-201ENST00000043402 IRF2BP1Q8IU81 584 aa29.31■■■□□ 2.28
RTN4R-201ENST00000043402 FXR2P51116 673 aaKnown RBP eCLIP29.3■■■□□ 2.28
RTN4R-201ENST00000043402 KCNJ18B7U540 433 aa29.3■■■□□ 2.28
RTN4R-201ENST00000043402 RAD21O60216 631 aa29.3■■■□□ 2.28
RTN4R-201ENST00000043402 EN1Q05925 392 aaPredicted RBP29.3■■■□□ 2.28
RTN4R-201ENST00000043402 KCNJ12Q14500 433 aa29.3■■■□□ 2.28
RTN4R-201ENST00000043402 TRIM65Q6PJ69 517 aa29.3■■■□□ 2.28
RTN4R-201ENST00000043402 CUL5Q93034 780 aa29.3■■■□□ 2.28
RTN4R-201ENST00000043402 C7orf25Q9BPX7 421 aa29.3■■■□□ 2.28
RTN4R-201ENST00000043402 PPP2R2CQ9Y2T4 447 aa29.3■■■□□ 2.28
RTN4R-201ENST00000043402 MYH7BA7E2Y1 1941 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 COPB1P53618 953 aaKnown RBP29.29■■■□□ 2.28
RTN4R-201ENST00000043402 GRB10Q13322 594 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 TOGARAM2Q6ZUX3 1019 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 VPS16Q9H269 839 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 N4BP3O15049 544 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 PRKCSHP14314 528 aaPredicted RBP29.29■■■□□ 2.28
RTN4R-201ENST00000043402 SLC1A4P43007 532 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 SPAG1Q07617 926 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 NCBP1Q09161 790 aaKnown RBP29.29■■■□□ 2.28
RTN4R-201ENST00000043402 NAA30Q147X3 362 aaPredicted RBP29.29■■■□□ 2.28
RTN4R-201ENST00000043402 SLFN13Q68D06 897 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 CPLX3Q8WVH0 158 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 ANKRD7Q92527 254 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 PRMT6Q96LA8 375 aaPredicted RBP29.29■■■□□ 2.28
RTN4R-201ENST00000043402 PANX2Q96RD6 677 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 CAMKK2Q96RR4 588 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 PSTPIP2Q9H939 334 aa29.29■■■□□ 2.28
RTN4R-201ENST00000043402 TAB2Q9NYJ8 693 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms