RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Rasa3Q60790 834 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Adck2Q6NSR3 617 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Abcf1Q6P542 837 aaKnown RBP17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Exoc8Q6PGF7 716 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Ildr1Q8CBR1 537 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Krt82Q99M74 516 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Acot3Q9QYR7 432 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 EporP14753 507 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 CtshP49935 333 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Aggf1Q7TN31 711 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Arhgef19Q8BWA8 802 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Tgs1Q923W1 853 aa17.87■□□□□ 0.45
Trim39-203ENSMUST00000113706 Apol7aB2RT54 418 aa17.86■□□□□ 0.45
Trim39-203ENSMUST00000113706 Vmn2r71L7N2D8 855 aa17.86■□□□□ 0.45
Trim39-203ENSMUST00000113706 Ms4a1P19437 291 aa17.86■□□□□ 0.45
Trim39-203ENSMUST00000113706 Eif5P59325 429 aaKnown RBP17.86■□□□□ 0.45
Trim39-203ENSMUST00000113706 Tshz1Q5DTH5 1084 aa17.86■□□□□ 0.45
Trim39-203ENSMUST00000113706 Ces1Q8VCC2 565 aa17.86■□□□□ 0.45
Trim39-203ENSMUST00000113706 Sertad1Q9JL10 236 aa17.86■□□□□ 0.45
Trim39-203ENSMUST00000113706 Nedd4P46935 887 aaKnown RBP17.86■□□□□ 0.45
Trim39-203ENSMUST00000113706 Sval3Q76I99 144 aa17.86■□□□□ 0.45
Trim39-203ENSMUST00000113706 Herc3A6H6S0 1050 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Diaph1O08808 1255 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Il13ra2O88786 383 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Pde4aO89084 844 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Nedd1P33215 660 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Irf5P56477 497 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Ccnt1Q9QWV9 724 aaKnown RBP17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Map7d1A2AJI0 846 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Bbs9Q811G0 885 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Ddx27Q921N6 760 aaKnown RBP17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Azi2Q9QYP6 405 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Cap1P40124 474 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Lgr6Q3UVD5 967 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Vil1Q62468 827 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Mettl5Q8K1A0 209 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 Alpk1Q9CXB8 1231 aa17.85■□□□□ 0.45
Trim39-203ENSMUST00000113706 SynrgQ5SV85 1306 aa17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 Prr7Q3V0I2 269 aa17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 LdhdQ7TNG8 484 aa17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 Ccdc122Q8BVN0 290 aa17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 Kbtbd13Q8C828 458 aa17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 Tgm5Q9D7I9 724 aa17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 Meis2P97367 477 aa17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 Ccdc189Q6NZQ0 333 aa17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 Frmd3Q8BHD4 595 aa17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 Eps8l1Q8R5F8 716 aa17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 Ndfip2Q91ZP6 311 aa17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 Fxr2Q9WVR4 673 aaKnown RBP17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 NrapQ80XB4 1728 aa17.84■□□□□ 0.45
Trim39-203ENSMUST00000113706 Stxbp3Q60770 592 aa17.83■□□□□ 0.45
Trim39-203ENSMUST00000113706 Slc9c1Q6UJY2 1175 aa17.83■□□□□ 0.45
Trim39-203ENSMUST00000113706 Shtn1Q8K2Q9 631 aa17.83■□□□□ 0.45
Trim39-203ENSMUST00000113706 GrapQ9CX99 217 aa17.83■□□□□ 0.45
Trim39-203ENSMUST00000113706 Thap2Q9D305 217 aa17.83■□□□□ 0.45
Trim39-203ENSMUST00000113706 Pcdh11xF6ZNL5 1338 aa17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 Jakmip2D3YXK0 820 aa17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 Zfp251Q6PCX8 632 aa17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 Fbxo11Q7TPD1 930 aaKnown RBP17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 Plcg2Q8CIH5 1265 aa17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 Jakmip3Q5DTN8 844 aa17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 Ccdc93Q7TQK5 629 aa17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gpsm2Q8VDU0 679 aa17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 Bhmt2Q91WS4 363 aa17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gbp7Q91Z40 638 aa17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 Gnl2Q99LH1 728 aaKnown RBP17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 Saal1Q9D2C2 474 aa17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 Elf2Q9JHC9 593 aa17.83■□□□□ 0.44
Trim39-203ENSMUST00000113706 4932429P05RikA2ADI4 785 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Usp17ldG5E8G2 545 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Usp17lcG5E8I7 545 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Specc1lQ2KN98 1118 aaKnown RBP17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 L1td1Q587J6 782 aaKnown RBP17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Ift88Q61371 824 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Stxbp2Q64324 593 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Tc2nQ91XT6 489 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Usp21Q9QZL6 566 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Ifi202Q9R002 445 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 AdnpQ9Z103 1108 aaKnown RBP17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Map9Q3TRR0 646 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Map3k9Q3U1V8 1077 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Rbm12b2Q66JV4 834 aaKnown RBP17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Lrrcc1Q69ZB0 1026 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Camkk2Q8C078 588 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Otud6bQ8K2H2 294 aa17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 IkQ9Z1M8 557 aaKnown RBP17.82■□□□□ 0.44
Trim39-203ENSMUST00000113706 Samsn1P57725 372 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Scfd2Q8BTY8 684 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Setdb2Q8C267 713 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Rasal3Q8C2K5 1041 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Frat2Q8K025 231 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Txndc5Q91W90 417 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Msh3P13705 1091 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Psen2Q61144 448 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Adam6bQ6IMH7 756 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Bst2Q8R2Q8 172 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Mical1Q8VDP3 1048 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Pcdha12Q91Y18 950 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Ulk4Q3V129 1303 aa17.81■□□□□ 0.44
Trim39-203ENSMUST00000113706 Ankrd40Q5SUE8 363 aa17.81■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 37.8 ms