RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 A530084C06RikQ3UTW2 186 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Frs2Q8C180 508 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Mamdc2Q8CG85 686 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 HnrnplQ8R081 586 aaKnown RBP9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Bhmt2Q91WS4 363 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Dach2Q925Q8 634 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Abca9Q8K449 1623 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 A2mQ6GQT1 1474 aa9.66□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Alpk3Q924C5 1678 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 BC051665E9Q623 330 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Gucy1a2F8VQK3 730 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Dok2O70469 412 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Nfkb1P25799 971 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Rad52P43352 420 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Nploc4P60670 608 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Slc44a5Q5RJI2 710 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Il10raQ61727 575 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Q8C4P0 716 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Usp45Q8K387 813 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 NkapQ9D0F4 415 aaKnown RBP9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Trp53inp1Q9QXE4 239 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Foxo3Q9WVH4 672 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Cul9Q80TT8 1865 aa9.65□□□□□ -0.86
Ccdc54-201ENSMUST00000062439 Kiaa0556Q8C753 1610 aa9.64□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Tiam1Q60610 1591 aa9.64□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Prr36E9PV26 1098 aa9.64□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 BC051142Q3V0M8 400 aa9.64□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Adam9Q61072 845 aa9.64□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Sephs1Q8BH69 392 aa9.64□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 E4f1Q8CCE9 783 aa9.64□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Sirt5Q8K2C6 310 aa9.64□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Ms4a3Q920C4 213 aa9.64□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Syde1Q9DBZ9 737 aa9.64□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Vmn1r53Q9EP93 310 aa9.64□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Gm1043A0A140LJC2 1431 aa9.64□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 G530012D18RikJ3QK25 139 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 HexaP29416 528 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Ptprn2P80560 1001 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Faap20Q3UN58 186 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Gm853Q3UNZ2 425 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Krt73Q6NXH9 539 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 LsampQ8BLK3 341 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 B3gnt9Q8VI16 399 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 WwoxQ91WL8 414 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Pls3Q99K51 630 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Dusp10Q9ESS0 483 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 FastkQ9JIX9 511 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Tmeff2Q9QYM9 374 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Mlh3A0A1Y7VMP7 1443 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Hecw2Q6I6G8 1578 aa9.63□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 NexmifQ5DTT1 1515 aa9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Pdcd11Q6NS46 1862 aaKnown RBP9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Znf326O88291 580 aa9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Hsp90b1P08113 802 aaKnown RBP9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Adcyap1r1P70205 496 aa9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 NfkbidQ2TB02 327 aa9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Cwc22Q8C5N3 908 aaKnown RBP9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Irak2Q8CFA1 622 aa9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 C1sbQ8CFG8 688 aa9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 C1saQ8CG14 688 aa9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Coq9Q8K1Z0 313 aa9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 GlyctkQ8QZY2 523 aa9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Dhcr24Q8VCH6 516 aaKnown RBP9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Lrrfip2Q91WK0 415 aa9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Cyp2c50Q91X77 490 aa9.62□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Ttll7A4Q9F0 912 aa9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Zfp384E9Q1A5 584 aaKnown RBP9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Ctnnd2O35927 1247 aa9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 FesP16879 822 aa9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Tnfrsf1bP25119 474 aa9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Cdc25cP48967 447 aa9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Usp5P56399 858 aaKnown RBP9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Cdca2Q14B71 982 aaKnown RBP9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Grm5Q3UVX5 1203 aa9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 St6gal1Q64685 403 aa9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Rpl10Q6ZWV3 214 aaKnown RBP9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Tas2r38Q7TQA6 331 aa9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Dclre1cQ8K4J0 705 aa9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Pcdhb6Q91XZ4 772 aa9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Ccdc105Q9D4K7 499 aa9.61□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Naip1Q9QWK5 1403 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 MecomP14404 1042 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 ChrneP20782 493 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Lrrc3P59034 257 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Uhmk1P97343 419 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Nuak1Q641K5 658 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Timd4Q6U7R4 343 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Clba1Q8BHN9 321 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Itpk1Q8BYN3 419 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 CcinQ8CDE2 588 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 DpydQ8CHR6 1025 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Wipf1Q8K1I7 493 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Gpsm2Q8VDU0 679 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Slc14a1Q8VHL0 384 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Lpin2Q99PI5 893 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Toe1Q9D2E2 511 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Tnfrsf21Q9EPU5 655 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Bean1Q9EQG5 255 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 MycsQ9Z304 431 aa9.6□□□□□ -0.87
Ccdc54-201ENSMUST00000062439 Kif14L0N7N1 1674 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms