RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 ASCC2Q9H1I8 757 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-230ENST00000641927 BTBD19C9JJ37 291 aa20.15■□□□□ 0.82
PHGDH-230ENST00000641927 PDHXO00330 501 aa20.15■□□□□ 0.82
PHGDH-230ENST00000641927 VWA5AO00534 786 aa20.15■□□□□ 0.82
PHGDH-230ENST00000641927 STX6O43752 255 aa20.15■□□□□ 0.82
PHGDH-230ENST00000641927 NAPAP54920 295 aa20.15■□□□□ 0.82
PHGDH-230ENST00000641927 USH1GQ495M9 461 aa20.15■□□□□ 0.82
PHGDH-230ENST00000641927 FBXO11Q86XK2 927 aa20.15■□□□□ 0.82
PHGDH-230ENST00000641927 CPXCR1Q8N123 301 aa20.15■□□□□ 0.82
PHGDH-230ENST00000641927 COA7Q96BR5 231 aa20.15■□□□□ 0.82
PHGDH-230ENST00000641927 AMNQ9BXJ7 453 aa20.15■□□□□ 0.82
PHGDH-230ENST00000641927 BARHL2Q9NY43 387 aa20.15■□□□□ 0.82
PHGDH-230ENST00000641927 SPDYE16A6NNV3 312 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-230ENST00000641927 PPP1R11O60927 126 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-230ENST00000641927 DDIT3P35638 169 aa20.14■□□□□ 0.81
PHGDH-230ENST00000641927 PKP1Q13835 747 aa20.14■□□□□ 0.81
PHGDH-230ENST00000641927 FOXD4L5Q5VV16 416 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-230ENST00000641927 FOXD4L4Q8WXT5 416 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-230ENST00000641927 P2RX7Q99572 595 aaKnown RBP20.14■□□□□ 0.81
PHGDH-230ENST00000641927 SLC38A10Q9HBR0 1119 aa20.14■□□□□ 0.81
PHGDH-230ENST00000641927 PNMA3Q9UL41 463 aa20.14■□□□□ 0.81
PHGDH-230ENST00000641927 KCNJ14Q9UNX9 436 aa20.14■□□□□ 0.81
PHGDH-230ENST00000641927 MYPNQ86TC9 1320 aa20.14■□□□□ 0.81
PHGDH-230ENST00000641927 STXBP3O00186 592 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 KRT40Q6A162 431 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 ANKRD23Q86SG2 305 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 FBXO18Q8NFZ0 1043 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 PCDHA1Q9Y5I3 950 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 RASSF10A6NK89 507 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 hCG_1984214I3L0E3 225 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 FDX1P10109 184 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 NLRP5P59047 1200 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 HERVK_113P62684 666 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 MCTP1Q6DN14 999 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 FAM43AQ8N2R8 423 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 ZNF713Q8N859 430 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-230ENST00000641927 CCDC148Q8NFR7 591 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 CCDC12Q8WUD4 166 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-230ENST00000641927 PTPN18Q99952 460 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 RAVER2Q9HCJ3 691 aaKnown RBP20.13■□□□□ 0.81
PHGDH-230ENST00000641927 CHMP5Q9NZZ3 219 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 CCPG1Q9ULG6 757 aa20.13■□□□□ 0.81
PHGDH-230ENST00000641927 PARP14Q460N5 1801 aa20.12■□□□□ 0.81
PHGDH-230ENST00000641927 CYP2C8P10632 490 aa20.12■□□□□ 0.81
PHGDH-230ENST00000641927 TAL1P17542 331 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-230ENST00000641927 PLS1Q14651 629 aa20.12■□□□□ 0.81
PHGDH-230ENST00000641927 TYW1BQ6NUM6 668 aa20.12■□□□□ 0.81
PHGDH-230ENST00000641927 SMCR8Q8TEV9 937 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-230ENST00000641927 CAPNS2Q96L46 248 aa20.12■□□□□ 0.81
PHGDH-230ENST00000641927 AGBL1Q96MI9 1066 aa20.12■□□□□ 0.81
PHGDH-230ENST00000641927 SH3GLB2Q9NR46 395 aa20.12■□□□□ 0.81
PHGDH-230ENST00000641927 CIZ1Q9ULV3 898 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-230ENST00000641927 SLC45A1Q9Y2W3 748 aa20.12■□□□□ 0.81
PHGDH-230ENST00000641927 WDR33Q9C0J8 1336 aaKnown RBP20.11■□□□□ 0.81
PHGDH-230ENST00000641927 TESPA1A2RU30 521 aaPredicted RBP20.11■□□□□ 0.81
PHGDH-230ENST00000641927 ICAM1P05362 532 aa20.11■□□□□ 0.81
PHGDH-230ENST00000641927 PDIA4P13667 645 aaKnown RBP20.11■□□□□ 0.81
PHGDH-230ENST00000641927 NUCB2P80303 420 aa20.11■□□□□ 0.81
PHGDH-230ENST00000641927 SREBF2Q12772 1141 aa20.11■□□□□ 0.81
PHGDH-230ENST00000641927 TRAF1Q13077 416 aa20.11■□□□□ 0.81
PHGDH-230ENST00000641927 SAFBQ15424 915 aaKnown RBP eCLIP20.11■□□□□ 0.81
PHGDH-230ENST00000641927 SHISA4Q96DD7 197 aa20.11■□□□□ 0.81
PHGDH-230ENST00000641927 PAGR1Q9BTK6 254 aa20.11■□□□□ 0.81
PHGDH-230ENST00000641927 ADAMTS5Q9UNA0 930 aa20.11■□□□□ 0.81
PHGDH-230ENST00000641927 MTMR6Q9Y217 621 aa20.11■□□□□ 0.81
PHGDH-230ENST00000641927 RLFQ13129 1914 aa20.11■□□□□ 0.81
PHGDH-230ENST00000641927 INHBEP58166 350 aa20.1■□□□□ 0.81
PHGDH-230ENST00000641927 HTRA3P83110 453 aa20.1■□□□□ 0.81
PHGDH-230ENST00000641927 NOGQ13253 232 aa20.1■□□□□ 0.81
PHGDH-230ENST00000641927 GNL2Q13823 731 aaKnown RBP20.1■□□□□ 0.81
PHGDH-230ENST00000641927 ZNF536O15090 1300 aa20.1■□□□□ 0.81
PHGDH-230ENST00000641927 SMCO2A6NFE2 343 aa20.1■□□□□ 0.81
PHGDH-230ENST00000641927 MMP1P03956 469 aa20.1■□□□□ 0.81
PHGDH-230ENST00000641927 KIF23Q02241 960 aaPredicted RBP20.1■□□□□ 0.81
PHGDH-230ENST00000641927 TMEM132BQ14DG7 1078 aa20.1■□□□□ 0.81
PHGDH-230ENST00000641927 ZIC5Q96T25 663 aa20.1■□□□□ 0.81
PHGDH-230ENST00000641927 PHF20Q9BVI0 1012 aa20.1■□□□□ 0.81
PHGDH-230ENST00000641927 BRMS1Q9HCU9 246 aa20.1■□□□□ 0.81
PHGDH-230ENST00000641927 HOMER2Q9NSB8 354 aa20.1■□□□□ 0.81
PHGDH-230ENST00000641927 IGF2BP3O00425 579 aaKnown RBP eCLIP20.09■□□□□ 0.81
PHGDH-230ENST00000641927 ZSCAN22P10073 491 aaPredicted RBP20.09■□□□□ 0.81
PHGDH-230ENST00000641927 ALAS1P13196 640 aa20.09■□□□□ 0.81
PHGDH-230ENST00000641927 CALML3P27482 149 aa20.09■□□□□ 0.81
PHGDH-230ENST00000641927 PPP1R18Q6NYC8 613 aa20.09■□□□□ 0.81
PHGDH-230ENST00000641927 FERMT3Q86UX7 667 aa20.09■□□□□ 0.81
PHGDH-230ENST00000641927 MB21D1Q8N884 522 aa20.09■□□□□ 0.81
PHGDH-230ENST00000641927 PARK7Q99497 189 aaKnown RBP20.09■□□□□ 0.81
PHGDH-230ENST00000641927 C6orf50Q9HD87 102 aa20.09■□□□□ 0.81
PHGDH-230ENST00000641927 AOC2O75106 756 aa20.08■□□□□ 0.81
PHGDH-230ENST00000641927 OAZ1P54368 228 aa20.08■□□□□ 0.81
PHGDH-230ENST00000641927 SNRNP48Q6IEG0 339 aaKnown RBP20.08■□□□□ 0.81
PHGDH-230ENST00000641927 LBX2Q6XYB7 198 aa20.08■□□□□ 0.81
PHGDH-230ENST00000641927 IFNL1Q8IU54 200 aa20.08■□□□□ 0.81
PHGDH-230ENST00000641927 REPS2Q8NFH8 660 aa20.08■□□□□ 0.81
PHGDH-230ENST00000641927 TEX13BQ9BXU2 312 aa20.08■□□□□ 0.81
PHGDH-230ENST00000641927 PNMA2Q9UL42 364 aa20.08■□□□□ 0.81
PHGDH-230ENST00000641927 ZNF214Q9UL59 606 aaPredicted RBP20.08■□□□□ 0.81
PHGDH-230ENST00000641927 COL11A1P12107 1806 aaPredicted RBP20.08■□□□□ 0.8
PHGDH-230ENST00000641927 PEX10O60683 326 aa20.07■□□□□ 0.8
PHGDH-230ENST00000641927 BRD1O95696 1058 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms