RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 ZBTB5O15062 677 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 CNMDO75829 334 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 FLOT1O75955 427 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 DEXIO95424 95 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 HSPA6P17066 643 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 MAP2K2P36507 400 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 OAZ1P54368 228 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 HERVK_113P62684 666 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 SSRP1Q08945 709 aaKnown RBP10.56□□□□□ -0.72
SCARB2-225ENST00000640900 PABPC4Q13310 644 aaKnown RBP eCLIP10.56□□□□□ -0.72
SCARB2-225ENST00000640900 GADL1Q6ZQY3 521 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
SCARB2-225ENST00000640900 TEX2Q8IWB9 1127 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 MB21D1Q8N884 522 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 IPO9Q96P70 1041 aaKnown RBP10.56□□□□□ -0.72
SCARB2-225ENST00000640900 PIGSQ96S52 555 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 CFHR5Q9BXR6 569 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 ORC3Q9UBD5 711 aaPredicted RBP10.56□□□□□ -0.72
SCARB2-225ENST00000640900 ZNF214Q9UL59 606 aaPredicted RBP10.56□□□□□ -0.72
SCARB2-225ENST00000640900 MTMR7Q9Y216 660 aa10.56□□□□□ -0.72
SCARB2-225ENST00000640900 SMCHD1A6NHR9 2005 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 hCG_1984214I3L0E3 225 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 PDHXO00330 501 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 SCG2P13521 617 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 KIF23Q02241 960 aaPredicted RBP10.55□□□□□ -0.72
SCARB2-225ENST00000640900 GHRHRQ02643 423 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 SREBF2Q12772 1141 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 MKRN3Q13064 507 aaKnown RBP10.55□□□□□ -0.72
SCARB2-225ENST00000640900 NPY5RQ15761 445 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 QRICH1Q2TAL8 776 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 TYW1BQ6NUM6 668 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 TRIM22Q8IYM9 498 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 ZNF713Q8N859 430 aaPredicted RBP10.55□□□□□ -0.72
SCARB2-225ENST00000640900 GTF3C2Q8WUA4 911 aaPredicted RBP10.55□□□□□ -0.72
SCARB2-225ENST00000640900 ATG4CQ96DT6 458 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 RRP36Q96EU6 259 aaKnown RBP10.55□□□□□ -0.72
SCARB2-225ENST00000640900 SLC26A6Q9BXS9 759 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 TANGO6Q9C0B7 1094 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 MAF1Q9H063 256 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 CWC22Q9HCG8 908 aaKnown RBP10.55□□□□□ -0.72
SCARB2-225ENST00000640900 SH3GLB2Q9NR46 395 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 BARHL2Q9NY43 387 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 RBPJLQ9UBG7 517 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 MORF4L1Q9UBU8 362 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 PNMA2Q9UL42 364 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 RABGAP1Q9Y3P9 1069 aa10.55□□□□□ -0.72
SCARB2-225ENST00000640900 WDR33Q9C0J8 1336 aaKnown RBP10.55□□□□□ -0.72
SCARB2-225ENST00000640900 MYH6P13533 1939 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 COL11A1P12107 1806 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-225ENST00000640900 ESYT2A0FGR8 921 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 STXBP3O00186 592 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 OPLAHO14841 1288 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 RAD21O60216 631 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 DTNBO60941 627 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 AOC2O75106 756 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 ICAM1P05362 532 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 OSBPP22059 807 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 GJB2P29033 226 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 VEGFBP49765 207 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 TMEM132BQ14DG7 1078 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 CDC37Q16543 378 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-225ENST00000640900 WWC2Q6AWC2 1192 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 IFNLR1Q8IU57 520 aaPredicted RBP10.54□□□□□ -0.72
SCARB2-225ENST00000640900 CCDC82Q8N4S0 544 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 DNAJC5GQ8N7S2 189 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 FBXO18Q8NFZ0 1043 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 KIFC2Q96AC6 838 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 AIFM3Q96NN9 605 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 BTBD7Q9P203 1132 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 PNMA3Q9UL41 463 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 SMC3Q9UQE7 1217 aa10.54□□□□□ -0.72
SCARB2-225ENST00000640900 hCG_1642624A0A1W2PR95 340 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 M0R2N6 131 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 BCRP11274 1271 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 GCLCP48506 637 aaPredicted RBP10.53□□□□□ -0.72
SCARB2-225ENST00000640900 SLC4A3P48751 1232 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 IRX3P78415 501 aaPredicted RBP10.53□□□□□ -0.72
SCARB2-225ENST00000640900 HTRA3P83110 453 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 PPP1R18Q6NYC8 613 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 C17orf99Q6UX52 265 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 RIOX2Q8IUF8 465 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 DAGLBQ8NCG7 672 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 CLEC4DQ8WXI8 215 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 WASF1Q92558 559 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 DDX11Q96FC9 970 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 PARK7Q99497 189 aaKnown RBP10.53□□□□□ -0.72
SCARB2-225ENST00000640900 AMNQ9BXJ7 453 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 ZMYND12Q9H0C1 365 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 VAT1LQ9HCJ6 419 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 TXNRD2Q9NNW7 524 aa10.53□□□□□ -0.72
SCARB2-225ENST00000640900 PIK3CDO00329 1044 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 CA12O43570 354 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 TLR2O60603 784 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 ZBED4O75132 1171 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 PPFIA3O75145 1194 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 ALDH1A1P00352 501 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 CYP2C8P10632 490 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 PDIA4P13667 645 aaKnown RBP10.52□□□□□ -0.73
SCARB2-225ENST00000640900 SYT1P21579 422 aa10.52□□□□□ -0.73
SCARB2-225ENST00000640900 SNAP25P60880 206 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms