RNA–Protein interactions for RNA: ENST00000640654.1

RTTN-220, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 982 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-220ENST00000640654 TJP2Q9UDY2 1190 aa6.15□□□□□ -1.42
RTTN-220ENST00000640654 TTF2Q9UNY4 1162 aaKnown RBP6.15□□□□□ -1.42
RTTN-220ENST00000640654 CLASP1Q7Z460 1538 aa6.15□□□□□ -1.43
RTTN-220ENST00000640654 CEP152O94986 1710 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 SPHKAPQ2M3C7 1700 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 MAPK8P45983 427 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 CDK8P49336 464 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 ATP2B2Q01814 1243 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 ADGRF1Q5T601 910 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 DTWD2Q8NBA8 298 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 SIRT5Q9NXA8 310 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 CEP131Q9UPN4 1083 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 SPAG9O60271 1321 aaKnown RBP6.14□□□□□ -1.43
RTTN-220ENST00000640654 RTEL1-TNFRSF6BF6WH68 1400 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 WDR7Q9Y4E6 1490 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 TRPM2O94759 1503 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 CLTCL1P53675 1640 aa6.14□□□□□ -1.43
RTTN-220ENST00000640654 OTOL1A6NHN0 477 aaPredicted RBP6.13□□□□□ -1.43
RTTN-220ENST00000640654 SOWAHDA6NJG2 315 aa6.13□□□□□ -1.43
RTTN-220ENST00000640654 TCERG1O14776 1098 aaKnown RBP6.13□□□□□ -1.43
RTTN-220ENST00000640654 USP17L7P0C7H9 530 aa6.13□□□□□ -1.43
RTTN-220ENST00000640654 PPP2R1AP30153 589 aa6.13□□□□□ -1.43
RTTN-220ENST00000640654 ANP32AP39687 249 aaKnown RBP6.13□□□□□ -1.43
RTTN-220ENST00000640654 SRSF3P84103 164 aaKnown RBP6.13□□□□□ -1.43
RTTN-220ENST00000640654 OLFML2BQ68BL8 750 aa6.13□□□□□ -1.43
RTTN-220ENST00000640654 KRTAP5-3Q6L8H2 238 aa6.13□□□□□ -1.43
RTTN-220ENST00000640654 DNAJB8Q8NHS0 232 aa6.13□□□□□ -1.43
RTTN-220ENST00000640654 IPO9Q96P70 1041 aaKnown RBP6.13□□□□□ -1.43
RTTN-220ENST00000640654 CRBNQ96SW2 442 aa6.13□□□□□ -1.43
RTTN-220ENST00000640654 BCL11AQ9H165 835 aa6.13□□□□□ -1.43
RTTN-220ENST00000640654 C12orf49Q9H741 205 aa6.13□□□□□ -1.43
RTTN-220ENST00000640654 PTPRTO14522 1441 aa6.13□□□□□ -1.43
RTTN-220ENST00000640654 TET3O43151 1660 aa6.13□□□□□ -1.43
RTTN-220ENST00000640654 HRKO00198 91 aa6.12□□□□□ -1.43
RTTN-220ENST00000640654 PLIN1O60240 522 aa6.12□□□□□ -1.43
RTTN-220ENST00000640654 DEPDC5O75140 1603 aa6.12□□□□□ -1.43
RTTN-220ENST00000640654 RPS26P62854 115 aaKnown RBP6.12□□□□□ -1.43
RTTN-220ENST00000640654 ZFYVE16Q7Z3T8 1539 aa6.12□□□□□ -1.43
RTTN-220ENST00000640654 GGNQ86UU5 652 aa6.12□□□□□ -1.43
RTTN-220ENST00000640654 MCATQ8IVS2 390 aaKnown RBP6.12□□□□□ -1.43
RTTN-220ENST00000640654 AFAP1Q8N556 730 aa6.12□□□□□ -1.43
RTTN-220ENST00000640654 ARAP3Q8WWN8 1544 aa6.12□□□□□ -1.43
RTTN-220ENST00000640654 SCAF11Q99590 1463 aaKnown RBP6.12□□□□□ -1.43
RTTN-220ENST00000640654 SCAPERQ9BY12 1400 aa6.12□□□□□ -1.43
RTTN-220ENST00000640654 ADAM30Q9UKF2 790 aa6.12□□□□□ -1.43
RTTN-220ENST00000640654 KNSTRNQ9Y448 316 aa6.12□□□□□ -1.43
RTTN-220ENST00000640654 SYNMO15061 1565 aa6.11□□□□□ -1.43
RTTN-220ENST00000640654 ASXL1Q8IXJ9 1541 aa6.11□□□□□ -1.43
RTTN-220ENST00000640654 GFRA2O00451 464 aa6.11□□□□□ -1.43
RTTN-220ENST00000640654 PSPNO60542 156 aa6.11□□□□□ -1.43
RTTN-220ENST00000640654 SEPT6Q14141 434 aa6.11□□□□□ -1.43
RTTN-220ENST00000640654 WDR43Q15061 677 aaKnown RBP eCLIP6.11□□□□□ -1.43
RTTN-220ENST00000640654 DACT3Q96B18 629 aaPredicted RBP6.11□□□□□ -1.43
RTTN-220ENST00000640654 TMPRSS5Q9H3S3 457 aa6.11□□□□□ -1.43
RTTN-220ENST00000640654 MBD1Q9UIS9 605 aaPredicted RBP6.11□□□□□ -1.43
RTTN-220ENST00000640654 KIAA1210Q9ULL0 1709 aa6.11□□□□□ -1.43
RTTN-220ENST00000640654 MYOM1P52179 1685 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 VWDEQ8N2E2 1590 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 INO80Q9ULG1 1556 aaPredicted RBP6.1□□□□□ -1.43
RTTN-220ENST00000640654 ATP7AQ04656 1500 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 KANK1Q14678 1352 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 PLEKHH1Q9ULM0 1364 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 SLC22A31A6NKX4 558 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 NFKB2Q00653 900 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 PDE4CQ08493 712 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 CLEC16AQ2KHT3 1053 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 SPATS1Q496A3 300 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 FEZF2Q8TBJ5 459 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 CYB5D2Q8WUJ1 264 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 RNF141Q8WVD5 230 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 ABCA9Q8IUA7 1624 aa6.1□□□□□ -1.43
RTTN-220ENST00000640654 PIK3C2GO75747 1445 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 NPC1L1Q9UHC9 1359 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 ZNF521Q96K83 1311 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 N4BP3O15049 544 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 KIF3BO15066 747 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 YARSP54577 528 aaKnown RBP6.09□□□□□ -1.43
RTTN-220ENST00000640654 C20orf194Q5TEA3 1177 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 NPM2Q86SE8 214 aaKnown RBP6.09□□□□□ -1.43
RTTN-220ENST00000640654 SIRT2Q8IXJ6 389 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 ZDHHC14Q8IZN3 488 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 PANK1Q8TE04 598 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 TEPSINQ96N21 525 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 BACH2Q9BYV9 841 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 MIR1-1HGQ9H1L0 117 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 KDM5AP29375 1690 aaKnown RBP6.09□□□□□ -1.43
RTTN-220ENST00000640654 ABCA6Q8N139 1617 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 NEURL4Q96JN8 1562 aa6.09□□□□□ -1.43
RTTN-220ENST00000640654 MROH1Q8NDA8 1641 aa6.08□□□□□ -1.44
RTTN-220ENST00000640654 MAP3K4Q9Y6R4 1608 aa6.08□□□□□ -1.44
RTTN-220ENST00000640654 ZC3H12DA2A288 527 aaKnown RBP6.08□□□□□ -1.44
RTTN-220ENST00000640654 RBAK-RBAKDNI3L0D1 243 aa6.08□□□□□ -1.44
RTTN-220ENST00000640654 DEKP35659 375 aaKnown RBP6.08□□□□□ -1.44
RTTN-220ENST00000640654 TNNI2P48788 182 aa6.08□□□□□ -1.44
RTTN-220ENST00000640654 GALK1P51570 392 aa6.08□□□□□ -1.44
RTTN-220ENST00000640654 KRTAP10-2P60368 255 aa6.08□□□□□ -1.44
RTTN-220ENST00000640654 TEKQ02763 1124 aa6.08□□□□□ -1.44
RTTN-220ENST00000640654 SLFN5Q08AF3 891 aa6.08□□□□□ -1.44
RTTN-220ENST00000640654 CCDC85BQ15834 202 aaPredicted RBP6.08□□□□□ -1.44
RTTN-220ENST00000640654 SLC14A2Q15849 920 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms