RNA–Protein interactions for RNA: ENST00000637223.1

CLN6-218, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-218ENST00000637223 TNPO2O14787 897 aaKnown RBP20.02■□□□□ 0.8
CLN6-218ENST00000637223 FDX1P10109 184 aa20.02■□□□□ 0.8
CLN6-218ENST00000637223 KIF5BP33176 963 aa20.02■□□□□ 0.8
CLN6-218ENST00000637223 STAT3P40763 770 aa20.02■□□□□ 0.8
CLN6-218ENST00000637223 SNRNP48Q6IEG0 339 aaKnown RBP20.02■□□□□ 0.8
CLN6-218ENST00000637223 NCAPG2Q86XI2 1143 aa20.02■□□□□ 0.8
CLN6-218ENST00000637223 ADGRF4Q8IZF3 695 aa20.02■□□□□ 0.8
CLN6-218ENST00000637223 KIF2CQ99661 725 aa20.02■□□□□ 0.8
CLN6-218ENST00000637223 TEX13BQ9BXU2 312 aa20.02■□□□□ 0.8
CLN6-218ENST00000637223 RANBP17Q9H2T7 1088 aaKnown RBP20.02■□□□□ 0.8
CLN6-218ENST00000637223 CWC22Q9HCG8 908 aaKnown RBP20.02■□□□□ 0.8
CLN6-218ENST00000637223 KIAA0100Q14667 2235 aaKnown RBP20.02■□□□□ 0.79
CLN6-218ENST00000637223 GOLGA8AA7E2F4 631 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 PLEKHA8P1O95397 391 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 TAL1P17542 331 aaPredicted RBP20.01■□□□□ 0.79
CLN6-218ENST00000637223 ERCC3P19447 782 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 MAPK4P31152 587 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 NEK4P51957 841 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 SLC35G1Q2M3R5 365 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 NBPF11Q86T75 865 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 RIOX2Q8IUF8 465 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 FANCBQ8NB91 859 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 AGBL1Q96MI9 1066 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 JMJD4Q9H9V9 463 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 PTPN22Q9Y2R2 807 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 ZNF536O15090 1300 aa20.01■□□□□ 0.79
CLN6-218ENST00000637223 PARP14Q460N5 1801 aa20■□□□□ 0.79
CLN6-218ENST00000637223 ARHGEF6Q15052 776 aa20■□□□□ 0.79
CLN6-218ENST00000637223 GPR142Q7Z601 462 aa20■□□□□ 0.79
CLN6-218ENST00000637223 CMTR1Q8N1G2 835 aaKnown RBP20■□□□□ 0.79
CLN6-218ENST00000637223 TBC1D32Q96NH3 1257 aa20■□□□□ 0.79
CLN6-218ENST00000637223 RIPK3Q9Y572 518 aa20■□□□□ 0.79
CLN6-218ENST00000637223 MKI67P46013 3256 aaKnown RBP20■□□□□ 0.79
CLN6-218ENST00000637223 ATP2A1O14983 1001 aa19.99■□□□□ 0.79
CLN6-218ENST00000637223 SLC25A27O95847 323 aa19.99■□□□□ 0.79
CLN6-218ENST00000637223 METAP2P50579 478 aaKnown RBP eCLIP19.99■□□□□ 0.79
CLN6-218ENST00000637223 OAZ1P54368 228 aa19.99■□□□□ 0.79
CLN6-218ENST00000637223 AK2P54819 239 aa19.99■□□□□ 0.79
CLN6-218ENST00000637223 CDC37Q16543 378 aaPredicted RBP19.99■□□□□ 0.79
CLN6-218ENST00000637223 RTN1Q16799 776 aa19.99■□□□□ 0.79
CLN6-218ENST00000637223 NOL8Q76FK4 1167 aaKnown RBP19.99■□□□□ 0.79
CLN6-218ENST00000637223 PLEKHH3Q7Z736 793 aa19.99■□□□□ 0.79
CLN6-218ENST00000637223 SHCBP1Q8NEM2 672 aa19.99■□□□□ 0.79
CLN6-218ENST00000637223 COA7Q96BR5 231 aa19.99■□□□□ 0.79
CLN6-218ENST00000637223 CCPG1Q9ULG6 757 aa19.99■□□□□ 0.79
CLN6-218ENST00000637223 ZSWIM8A7E2V4 1837 aa19.99■□□□□ 0.79
CLN6-218ENST00000637223 CYTH3O43739 400 aa19.98■□□□□ 0.79
CLN6-218ENST00000637223 ICAM1P05362 532 aa19.98■□□□□ 0.79
CLN6-218ENST00000637223 GNAQP50148 359 aa19.98■□□□□ 0.79
CLN6-218ENST00000637223 PRKCZQ05513 592 aa19.98■□□□□ 0.79
CLN6-218ENST00000637223 TMTC3Q6ZXV5 915 aa19.98■□□□□ 0.79
CLN6-218ENST00000637223 HOMER1Q86YM7 354 aa19.98■□□□□ 0.79
CLN6-218ENST00000637223 SRBD1Q8N5C6 995 aaKnown RBP19.98■□□□□ 0.79
CLN6-218ENST00000637223 PIBF1Q8WXW3 757 aa19.98■□□□□ 0.79
CLN6-218ENST00000637223 ALDH8A1Q9H2A2 487 aaPredicted RBP19.98■□□□□ 0.79
CLN6-218ENST00000637223 MROH8Q9H579 483 aa19.98■□□□□ 0.79
CLN6-218ENST00000637223 HOMER2Q9NSB8 354 aa19.98■□□□□ 0.79
CLN6-218ENST00000637223 ALAS1P13196 640 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 HOXD10P28358 340 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 PDIA3P30101 505 aaKnown RBP19.97■□□□□ 0.79
CLN6-218ENST00000637223 CDC27P30260 824 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 RCAN1P53805 252 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 EVCP57679 992 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 QRICH1Q2TAL8 776 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 CCDC82Q8N4S0 544 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 ARMC5Q96C12 935 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 PIGSQ96S52 555 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 LZTS2Q9BRK4 669 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 RIOX1Q9H6W3 641 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 FAM217BQ9NTX9 383 aaPredicted RBP19.97■□□□□ 0.79
CLN6-218ENST00000637223 RBM28Q9NW13 759 aaKnown RBP19.97■□□□□ 0.79
CLN6-218ENST00000637223 SRRDQ9UH36 339 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 GABRQQ9UN88 632 aa19.97■□□□□ 0.79
CLN6-218ENST00000637223 GNRH1P01148 92 aa19.96■□□□□ 0.79
CLN6-218ENST00000637223 COPB2P35606 906 aa19.96■□□□□ 0.79
CLN6-218ENST00000637223 CCT2P78371 535 aaKnown RBP19.96■□□□□ 0.79
CLN6-218ENST00000637223 STK3Q13188 491 aa19.96■□□□□ 0.79
CLN6-218ENST00000637223 ANKRD1Q15327 319 aa19.96■□□□□ 0.79
CLN6-218ENST00000637223 USH1GQ495M9 461 aa19.96■□□□□ 0.79
CLN6-218ENST00000637223 TMEM106CQ9BVX2 250 aa19.96■□□□□ 0.79
CLN6-218ENST00000637223 SPZ1Q9BXG8 430 aa19.96■□□□□ 0.79
CLN6-218ENST00000637223 RNF146Q9NTX7 359 aa19.96■□□□□ 0.79
CLN6-218ENST00000637223 TPCN1Q9ULQ1 816 aa19.96■□□□□ 0.79
CLN6-218ENST00000637223 IVNS1ABPQ9Y6Y0 642 aa19.96■□□□□ 0.79
CLN6-218ENST00000637223 PTPREP23469 700 aa19.95■□□□□ 0.78
CLN6-218ENST00000637223 ADD1P35611 737 aaKnown RBP19.95■□□□□ 0.78
CLN6-218ENST00000637223 FLT3LGP49771 235 aa19.95■□□□□ 0.78
CLN6-218ENST00000637223 MTMR8Q96EF0 704 aa19.95■□□□□ 0.78
CLN6-218ENST00000637223 ZNF274Q96GC6 653 aaPredicted RBP19.95■□□□□ 0.78
CLN6-218ENST00000637223 TRERF1Q96PN7 1200 aa19.95■□□□□ 0.78
CLN6-218ENST00000637223 NCOA5Q9HCD5 579 aaKnown RBP19.95■□□□□ 0.78
CLN6-218ENST00000637223 GJD2Q9UKL4 321 aa19.95■□□□□ 0.78
CLN6-218ENST00000637223 RBBP6Q7Z6E9 1792 aaKnown RBP19.95■□□□□ 0.78
CLN6-218ENST00000637223 NID2Q14112 1375 aa19.95■□□□□ 0.78
CLN6-218ENST00000637223 ZBTB5O15062 677 aa19.94■□□□□ 0.78
CLN6-218ENST00000637223 SMARCA1P28370 1054 aa19.94■□□□□ 0.78
CLN6-218ENST00000637223 RABEP1Q15276 862 aa19.94■□□□□ 0.78
CLN6-218ENST00000637223 TKFCQ3LXA3 575 aa19.94■□□□□ 0.78
CLN6-218ENST00000637223 MUM1L1Q5H9M0 696 aa19.94■□□□□ 0.78
CLN6-218ENST00000637223 MORN1Q5T089 497 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms