RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 PPP2R2CQ9Y2T4 447 aa13.68□□□□□ -0.22
CLN8-212ENST00000637083 CDK5RAP2Q96SN8 1893 aa13.68□□□□□ -0.22
CLN8-212ENST00000637083 C10orf71Q711Q0 1435 aa13.67□□□□□ -0.22
CLN8-212ENST00000637083 MYH1P12882 1939 aa13.67□□□□□ -0.22
CLN8-212ENST00000637083 LRRC10BA6NIK2 292 aa13.67□□□□□ -0.22
CLN8-212ENST00000637083 HLA-DOAP06340 250 aa13.67□□□□□ -0.22
CLN8-212ENST00000637083 CASP1P29466 404 aa13.67□□□□□ -0.22
CLN8-212ENST00000637083 KARSQ15046 597 aaKnown RBP13.67□□□□□ -0.22
CLN8-212ENST00000637083 PPP1R18Q6NYC8 613 aa13.67□□□□□ -0.22
CLN8-212ENST00000637083 HHIPL2Q6UWX4 724 aa13.67□□□□□ -0.22
CLN8-212ENST00000637083 COL23A1Q86Y22 540 aaPredicted RBP13.67□□□□□ -0.22
CLN8-212ENST00000637083 IGSF22Q8N9C0 903 aa13.67□□□□□ -0.22
CLN8-212ENST00000637083 STAMQ92783 540 aa13.67□□□□□ -0.22
CLN8-212ENST00000637083 MTMR4Q9NYA4 1195 aa13.67□□□□□ -0.22
CLN8-212ENST00000637083 RIMBP2O15034 1052 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 HOXA7P31268 230 aaPredicted RBP13.66□□□□□ -0.22
CLN8-212ENST00000637083 GABPAQ06546 454 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 SLC35G1Q2M3R5 365 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 USP17L2Q6R6M4 530 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 APTXQ7Z2E3 356 aaKnown RBP13.66□□□□□ -0.22
CLN8-212ENST00000637083 REXO1L1PQ8IX06 675 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 REXO1Q8N1G1 1221 aaKnown RBP13.66□□□□□ -0.22
CLN8-212ENST00000637083 NOC3LQ8WTT2 800 aaKnown RBP13.66□□□□□ -0.22
CLN8-212ENST00000637083 NELFBQ8WX92 580 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 TTF2Q9UNY4 1162 aaKnown RBP13.66□□□□□ -0.22
CLN8-212ENST00000637083 LTBP1Q14766 1721 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 ADAMTS3O15072 1205 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 PLSCR1O15162 318 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 CCNT1O60563 726 aaKnown RBP13.66□□□□□ -0.22
CLN8-212ENST00000637083 TTLL1O95922 423 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 SRGNP10124 158 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 PDHBP11177 359 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 PBX1P40424 430 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 PICALMQ13492 652 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 LETM2Q2VYF4 491 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 DPP8Q6V1X1 898 aaPredicted RBP13.66□□□□□ -0.22
CLN8-212ENST00000637083 CABP7Q86V35 215 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 AKT1S1Q96B36 256 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 PIGSQ96S52 555 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 FEZ1Q99689 392 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 RAB34Q9BZG1 259 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 KBTBD4Q9NVX7 518 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 SERPINB13Q9UIV8 391 aa13.66□□□□□ -0.22
CLN8-212ENST00000637083 ZNF215Q9UL58 517 aaPredicted RBP13.66□□□□□ -0.22
CLN8-212ENST00000637083 FOCADQ5VW36 1801 aa13.65□□□□□ -0.22
CLN8-212ENST00000637083 N4BP3O15049 544 aa13.65□□□□□ -0.22
CLN8-212ENST00000637083 CCDC175P0C221 793 aa13.65□□□□□ -0.22
CLN8-212ENST00000637083 ADKP55263 362 aaKnown RBP13.65□□□□□ -0.22
CLN8-212ENST00000637083 SMYD4Q8IYR2 804 aaPredicted RBP13.65□□□□□ -0.22
CLN8-212ENST00000637083 ADSSL1Q8N142 457 aa13.65□□□□□ -0.22
CLN8-212ENST00000637083 TEKT1Q969V4 418 aa13.65□□□□□ -0.22
CLN8-212ENST00000637083 CALML4Q96GE6 196 aa13.65□□□□□ -0.22
CLN8-212ENST00000637083 MTRQ99707 1265 aa13.65□□□□□ -0.22
CLN8-212ENST00000637083 TMEM60Q9H2L4 133 aa13.65□□□□□ -0.22
CLN8-212ENST00000637083 USP40Q9NVE5 1235 aa13.65□□□□□ -0.22
CLN8-212ENST00000637083 DNAI1Q9UI46 699 aa13.65□□□□□ -0.22
CLN8-212ENST00000637083 USP17L5A8MUK1 530 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 PSMA7O14818 248 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 RHOBTB3O94955 611 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 APBA3O96018 575 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 SNHG28P0DPA3 235 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 TMEM266Q2M3C6 531 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 MASTLQ96GX5 879 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 DHTKD1Q96HY7 919 aaPredicted RBP13.64□□□□□ -0.23
CLN8-212ENST00000637083 CCDC17Q96LX7 622 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 VAT1LQ9HCJ6 419 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 QSER1Q2KHR3 1735 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 IGKV6D-41A0A0C4DH26 115 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 KCNJ18B7U540 433 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 TEX33O43247 280 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 EEF1GP26641 437 aaKnown RBP13.64□□□□□ -0.23
CLN8-212ENST00000637083 ADCY7P51828 1080 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 COPB1P53618 953 aaKnown RBP13.64□□□□□ -0.23
CLN8-212ENST00000637083 KCNJ12Q14500 433 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 KRT31Q15323 416 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 CCDC93Q567U6 631 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 NAALADL2Q58DX5 795 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 TCP11X2Q5H9J9 407 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 GPATCH4Q5T3I0 446 aaKnown RBP13.64□□□□□ -0.23
CLN8-212ENST00000637083 PODNQ7Z5L7 613 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 ZNF397Q8NF99 534 aaPredicted RBP13.64□□□□□ -0.23
CLN8-212ENST00000637083 TBCKQ8TEA7 893 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 NAP1L4Q99733 375 aaKnown RBP13.64□□□□□ -0.23
CLN8-212ENST00000637083 MRIQ9BWK5 157 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 LRRC27Q9C0I9 530 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 GLT8D2Q9H1C3 349 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 THAP9Q9H5L6 903 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 MAGEC2Q9UBF1 373 aaPredicted RBP13.64□□□□□ -0.23
CLN8-212ENST00000637083 PARP3Q9Y6F1 533 aa13.64□□□□□ -0.23
CLN8-212ENST00000637083 BAZ2BQ9UIF8 2168 aaKnown RBP13.63□□□□□ -0.23
CLN8-212ENST00000637083 BICDL2A1A5D9 508 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 MFAP3LO75121 409 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 CDC25AP30304 524 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 PRCPP42785 496 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 RBL2Q08999 1139 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 KMT5BQ4FZB7 885 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 TRIM65Q6PJ69 517 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 TMTC1Q8IUR5 882 aa13.63□□□□□ -0.23
CLN8-212ENST00000637083 GIMAP8Q8ND71 665 aaPredicted RBP13.63□□□□□ -0.23
CLN8-212ENST00000637083 EHD4Q9H223 541 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms