RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 DNM2P50570 870 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 TTC38Q5R3I4 469 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 PDXDC2PQ6P474 469 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 LDHAL6AQ6ZMR3 332 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 ZNF572Q7Z3I7 529 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 MARCH10Q8NA82 808 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 PURBQ96QR8 312 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 LACRTQ9GZZ8 138 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 TFR2Q9UP52 801 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 H0YHG0 523 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 RPN1P04843 607 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 ATP2C1P98194 919 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 ZNF174Q15697 407 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 MICALCLQ6ZW33 695 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 TRIM58Q8NG06 486 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 ZNF507Q8TCN5 953 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 RNF41Q9H4P4 317 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 MAGEC2Q9UBF1 373 aaPredicted RBP17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 SNX12Q9UMY4 172 aa17.39■□□□□ 0.37
CACNA1A-235ENST00000637004 GLI3P10071 1580 aa17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 TCIRG1Q13488 830 aa17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 UBAC1Q9BSL1 405 aa17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 A1CFQ9NQ94 594 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 CAPN7Q9Y6W3 813 aa17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 PDS5AQ29RF7 1337 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 RIC1Q4ADV7 1423 aa17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 NUP188Q5SRE5 1749 aa17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 MBD4O95243 580 aa17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 PCCAP05165 728 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 PRLRP16471 622 aa17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 PRCPP42785 496 aa17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 PTGDRQ13258 359 aa17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 IRF2BP1Q8IU81 584 aa17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 TACO1Q9BSH4 297 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 THAP9Q9H5L6 903 aa17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 NHEJ1Q9H9Q4 299 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-235ENST00000637004 FSBPO95073 299 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 TRIM28Q13263 835 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 EARS2Q5JPH6 523 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 CREG2Q8IUH2 290 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 RABEP2Q9H5N1 569 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 SAMM50Q9Y512 469 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 TACC3Q9Y6A5 838 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 RTL9Q8NET4 1388 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 MACROD2A1Z1Q3 448 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 MEFVO15553 781 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 ZEB2O60315 1214 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 TACC1O75410 805 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 TRIM21P19474 475 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 TDO2P48775 406 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 VAV2P52735 878 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 MAP3K12Q12852 859 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 SPA17Q15506 151 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 PKD1L3Q7Z443 1732 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 NRAPQ86VF7 1730 aa17.37■□□□□ 0.37
CACNA1A-235ENST00000637004 RCCD1A6NED2 376 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 KCNQ2O43526 872 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 USO1O60763 962 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 GNAT2P19087 354 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 ARID4AP29374 1257 aaPredicted RBP17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 ZBED6P86452 979 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 DDR1Q08345 913 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 ADSSL1Q8N142 457 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 SPATA4Q8NEY3 305 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 CAVIN3Q969G5 261 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 RRP36Q96EU6 259 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 MTRQ99707 1265 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 LRRC1Q9BTT6 524 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 CNNM1Q9NRU3 951 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 DISP2A7MBM2 1401 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 GSG1L2A8MUP6 293 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 SRGNP10124 158 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 YTHDF3Q7Z739 585 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 NOC3LQ8WTT2 800 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 DMGDHQ9UI17 866 aaKnown RBP17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 MAPK8IP1Q9UQF2 711 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 GDAQ9Y2T3 454 aa17.36■□□□□ 0.37
CACNA1A-235ENST00000637004 GOLGB1Q14789 3259 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 PRPF3O43395 683 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 CCDC172P0C7W6 258 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 TCP1P17987 556 aaKnown RBP17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 CDK17Q00537 523 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 APBA1Q02410 837 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 NNTQ13423 1086 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 BARGINQ6ZT62 677 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 TTLL11Q8NHH1 800 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 FAM89AQ96GI7 184 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 STIM2Q9P246 746 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 AKAP11Q9UKA4 1901 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 TNFRSF8P28908 595 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 PKN1Q16512 942 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 TTC19Q6DKK2 380 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 ZBTB38Q8NAP3 1195 aaPredicted RBP17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 ARMT1Q9H993 441 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 EXOC1Q9NV70 894 aa17.35■□□□□ 0.37
CACNA1A-235ENST00000637004 TRAPPC10P48553 1259 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 FNTAP49354 379 aa17.34■□□□□ 0.37
CACNA1A-235ENST00000637004 PDCLQ13371 301 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms