RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 USP17L10C9JJH3 530 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 MPHOSPH10O00566 681 aaKnown RBP7.86□□□□□ -1.15
UPF3B-205ENST00000636792 SH2B2O14492 632 aaPredicted RBP7.86□□□□□ -1.15
UPF3B-205ENST00000636792 IFIT3O14879 490 aaKnown RBP7.86□□□□□ -1.15
UPF3B-205ENST00000636792 PRDM1O75626 825 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 GDF11O95390 407 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 INPP5BP32019 993 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 ECE1P42892 770 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 HUNKP57058 714 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 INHBEP58166 350 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 ANTXR2P58335 489 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 PABPC4Q13310 644 aaKnown RBP eCLIP7.86□□□□□ -1.15
UPF3B-205ENST00000636792 WTAPQ15007 396 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 SLC4A8Q2Y0W8 1093 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 ADCK5Q3MIX3 580 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 RRP12Q5JTH9 1297 aaKnown RBP7.86□□□□□ -1.15
UPF3B-205ENST00000636792 GPATCH4Q5T3I0 446 aaKnown RBP7.86□□□□□ -1.15
UPF3B-205ENST00000636792 IFIT1BQ5T764 474 aaKnown RBP7.86□□□□□ -1.15
UPF3B-205ENST00000636792 RGMBQ6NW40 437 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 MIGA2Q7L4E1 593 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 NPAS3Q8IXF0 933 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 ENAHQ8N8S7 591 aaPredicted RBP7.86□□□□□ -1.15
UPF3B-205ENST00000636792 GTF3C2Q8WUA4 911 aaPredicted RBP7.86□□□□□ -1.15
UPF3B-205ENST00000636792 GMCL1Q96IK5 515 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 USB1Q9BQ65 265 aaKnown RBP7.86□□□□□ -1.15
UPF3B-205ENST00000636792 ZNF408Q9H9D4 720 aa7.86□□□□□ -1.15
UPF3B-205ENST00000636792 RBBP6Q7Z6E9 1792 aaKnown RBP7.85□□□□□ -1.15
UPF3B-205ENST00000636792 CCDC196A0A1B0GTZ2 297 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 MANSC4A6NHS7 340 aaPredicted RBP7.85□□□□□ -1.15
UPF3B-205ENST00000636792 CCDC69A6NI79 296 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 WDR46O15213 610 aaKnown RBP7.85□□□□□ -1.15
UPF3B-205ENST00000636792 PLA2G6O60733 806 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 DXOO77932 396 aaKnown RBP7.85□□□□□ -1.15
UPF3B-205ENST00000636792 SNHG28P0DPA3 235 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 FDX1P10109 184 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 KIF5BP33176 963 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 GUCY1A2P33402 732 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 GMPRP36959 345 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 GTF2A2P52657 109 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 BACE1P56817 501 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 FGD1P98174 961 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 SREBF2Q12772 1141 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 NOGQ13253 232 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 SNAPC2Q13487 334 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 SEPT2Q15019 361 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 RAB3GAP1Q15042 981 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 ASPRV1Q53RT3 343 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 TMEM67Q5HYA8 995 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 PRAMEF18Q5VWM3 479 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 USP17L2Q6R6M4 530 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 SYNE3Q6ZMZ3 975 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 CYB5R4Q7L1T6 521 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 FASTKD5Q7L8L6 764 aaKnown RBP7.85□□□□□ -1.15
UPF3B-205ENST00000636792 CATIPQ7Z7H3 387 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 TEX2Q8IWB9 1127 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 IGDCC4Q8TDY8 1250 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 DCAF4Q8WV16 495 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 ZKSCAN4Q969J2 545 aaPredicted RBP7.85□□□□□ -1.15
UPF3B-205ENST00000636792 SLC10A4Q96EP9 437 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 ZNF274Q96GC6 653 aaPredicted RBP7.85□□□□□ -1.15
UPF3B-205ENST00000636792 KIF2CQ99661 725 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 FEZ1Q99689 392 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.85□□□□□ -1.15
UPF3B-205ENST00000636792 VCPKMTQ9H867 229 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 KAT14Q9H8E8 782 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 LY9Q9HBG7 655 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 SH2B1Q9NRF2 756 aaPredicted RBP7.85□□□□□ -1.15
UPF3B-205ENST00000636792 PDRG1Q9NUG6 133 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 RBM28Q9NW13 759 aaKnown RBP7.85□□□□□ -1.15
UPF3B-205ENST00000636792 PNMA2Q9UL42 364 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 STX8Q9UNK0 236 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 SCAF8Q9UPN6 1271 aaKnown RBP7.85□□□□□ -1.15
UPF3B-205ENST00000636792 AFG3L2Q9Y4W6 797 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 TACC3Q9Y6A5 838 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 TAF6LQ9Y6J9 622 aa7.85□□□□□ -1.15
UPF3B-205ENST00000636792 RLFQ13129 1914 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 A0A0G2JLL6 359 aaPredicted RBP7.84□□□□□ -1.15
UPF3B-205ENST00000636792 TESPA1A2RU30 521 aaPredicted RBP7.84□□□□□ -1.15
UPF3B-205ENST00000636792 DHX16O60231 1041 aaKnown RBP7.84□□□□□ -1.15
UPF3B-205ENST00000636792 ALDH1A1P00352 501 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 CETPP11597 493 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 EEF2P13639 858 aaKnown RBP7.84□□□□□ -1.15
UPF3B-205ENST00000636792 SMARCA1P28370 1054 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 GNAQP50148 359 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 TRAF1Q13077 416 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 RRP1BQ14684 758 aaKnown RBP7.84□□□□□ -1.15
UPF3B-205ENST00000636792 FAM47AQ5JRC9 791 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 APOA5Q6Q788 366 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 PRRT2Q7Z6L0 340 aaPredicted RBP7.84□□□□□ -1.15
UPF3B-205ENST00000636792 RASAL3Q86YV0 1011 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 FAM177A1Q8N128 213 aaPredicted RBP7.84□□□□□ -1.15
UPF3B-205ENST00000636792 PNMA1Q8ND90 353 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 OPTNQ96CV9 577 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 WNK4Q96J92 1243 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 ZSCAN31Q96LW9 406 aaPredicted RBP7.84□□□□□ -1.15
UPF3B-205ENST00000636792 IL17RBQ9NRM6 502 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 TMOD4Q9NZQ9 345 aa7.84□□□□□ -1.15
UPF3B-205ENST00000636792 ABT1Q9ULW3 272 aaKnown RBP7.84□□□□□ -1.15
UPF3B-205ENST00000636792 UBE2Q2LH0YL09 131 aa7.83□□□□□ -1.16
UPF3B-205ENST00000636792 hCG_1984214I3L0E3 225 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms