RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 USP17L20D6RJB6 530 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 STXBP3O00186 592 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 IGF2BP3O00425 579 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLN5-213ENST00000636681 SCG2P13521 617 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 DSG3P32926 999 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 HMGN5P82970 282 aaKnown RBP12.32□□□□□ -0.44
CLN5-213ENST00000636681 USP17L24Q0WX57 530 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 FOXD4L6Q3SYB3 417 aaPredicted RBP12.32□□□□□ -0.44
CLN5-213ENST00000636681 KRT40Q6A162 431 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 FOXD4L3Q6VB84 417 aaPredicted RBP12.32□□□□□ -0.44
CLN5-213ENST00000636681 PROCA1Q8NCQ7 364 aaPredicted RBP12.32□□□□□ -0.44
CLN5-213ENST00000636681 OXER1Q8TDS5 423 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 CHURC1Q8WUH1 139 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 LZTS2Q9BRK4 669 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 RAVER2Q9HCJ3 691 aaKnown RBP12.32□□□□□ -0.44
CLN5-213ENST00000636681 AGTPBP1Q9UPW5 1226 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 MTMR6Q9Y217 621 aa12.32□□□□□ -0.44
CLN5-213ENST00000636681 LCTP09848 1927 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 KIF28PB7ZC32 967 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 PDHXO00330 501 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 VWA5AO00534 786 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 ZBTB5O15062 677 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 ZBTB48P10074 688 aaPredicted RBP12.31□□□□□ -0.44
CLN5-213ENST00000636681 GTF2A2P52657 109 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 AKAP17AQ02040 695 aaKnown RBP12.31□□□□□ -0.44
CLN5-213ENST00000636681 NPY5RQ15761 445 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 FAM173BQ6P4H8 233 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 PRPF38AQ8NAV1 312 aaKnown RBP12.31□□□□□ -0.44
CLN5-213ENST00000636681 REPS2Q8NFH8 660 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 TBC1D5Q92609 795 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 RANBP17Q9H2T7 1088 aaKnown RBP12.31□□□□□ -0.44
CLN5-213ENST00000636681 TXNRD2Q9NNW7 524 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 BTBD7Q9P203 1132 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 RIPK3Q9Y572 518 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 ZSWIM8A7E2V4 1837 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 MYH7BA7E2Y1 1941 aa12.31□□□□□ -0.44
CLN5-213ENST00000636681 PNMA6FA0A0J9YX94 578 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 FAM205CA6NFA0 338 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 PLA2G6O60733 806 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 CETPP11597 493 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 COG2Q14746 738 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 TMEM132BQ14DG7 1078 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 FAM160B2Q86V87 743 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 RASGRP4Q8TDF6 673 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 C8orf76Q96K31 380 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 SLC38A10Q9HBR0 1119 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 RBBP6Q7Z6E9 1792 aaKnown RBP12.3□□□□□ -0.44
CLN5-213ENST00000636681 OPLAHO14841 1288 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 STX6O43752 255 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 CNMDO75829 334 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 ECM2O94769 699 aaPredicted RBP12.3□□□□□ -0.44
CLN5-213ENST00000636681 SMARCA1P28370 1054 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 HOXA7P31268 230 aaPredicted RBP12.3□□□□□ -0.44
CLN5-213ENST00000636681 KIF23Q02241 960 aaPredicted RBP12.3□□□□□ -0.44
CLN5-213ENST00000636681 NR5A1Q13285 461 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 DEFB115Q30KQ5 88 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 EARS2Q5JPH6 523 aaKnown RBP12.3□□□□□ -0.44
CLN5-213ENST00000636681 FBXO18Q8NFZ0 1043 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 CAPNS2Q96L46 248 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 PAGR1Q9BTK6 254 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 CREBZFQ9NS37 354 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 HOMER2Q9NSB8 354 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 SEC63Q9UGP8 760 aaKnown RBP12.3□□□□□ -0.44
CLN5-213ENST00000636681 ADAMTS5Q9UNA0 930 aa12.3□□□□□ -0.44
CLN5-213ENST00000636681 NAPAP54920 295 aa12.29□□□□□ -0.44
CLN5-213ENST00000636681 HERVK_113P62684 666 aa12.29□□□□□ -0.44
CLN5-213ENST00000636681 IRX3P78415 501 aaPredicted RBP12.29□□□□□ -0.44
CLN5-213ENST00000636681 UBE2SQ16763 222 aa12.29□□□□□ -0.44
CLN5-213ENST00000636681 Q3C1V9 767 aa12.29□□□□□ -0.44
CLN5-213ENST00000636681 MUM1L1Q5H9M0 696 aa12.29□□□□□ -0.44
CLN5-213ENST00000636681 FASTKD5Q7L8L6 764 aaKnown RBP12.29□□□□□ -0.44
CLN5-213ENST00000636681 FBXO11Q86XK2 927 aa12.29□□□□□ -0.44
CLN5-213ENST00000636681 PGBD1Q96JS3 809 aa12.29□□□□□ -0.44
CLN5-213ENST00000636681 CWC22Q9HCG8 908 aaKnown RBP12.29□□□□□ -0.44
CLN5-213ENST00000636681 TMEM260Q9NX78 707 aa12.29□□□□□ -0.44
CLN5-213ENST00000636681 BARHL2Q9NY43 387 aa12.29□□□□□ -0.44
CLN5-213ENST00000636681 ZNF214Q9UL59 606 aaPredicted RBP12.29□□□□□ -0.44
CLN5-213ENST00000636681 PCDHA1Q9Y5I3 950 aa12.29□□□□□ -0.44
CLN5-213ENST00000636681 RASSF10A6NK89 507 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 BTBD18B2RXH4 712 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 PLS1Q14651 629 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 MCTP1Q6DN14 999 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 PHF20Q9BVI0 1012 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 RBPJLQ9UBG7 517 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 CENPFP49454 3210 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 TESPA1A2RU30 521 aaPredicted RBP12.28□□□□□ -0.44
CLN5-213ENST00000636681 H3BQV1 296 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 NFIBO00712 420 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 BRD1O95696 1058 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 ALAS1P13196 640 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 VEGFBP49765 207 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 IFFO2Q5TF58 517 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 PURBQ96QR8 312 aaKnown RBP12.28□□□□□ -0.44
CLN5-213ENST00000636681 CCPG1Q9ULG6 757 aa12.28□□□□□ -0.44
CLN5-213ENST00000636681 SMCO2A6NFE2 343 aa12.27□□□□□ -0.45
CLN5-213ENST00000636681 WNT7AO00755 349 aa12.27□□□□□ -0.45
CLN5-213ENST00000636681 MMP1P03956 469 aa12.27□□□□□ -0.45
CLN5-213ENST00000636681 ZSCAN22P10073 491 aaPredicted RBP12.27□□□□□ -0.45
CLN5-213ENST00000636681 NLRP5P59047 1200 aa12.27□□□□□ -0.45
CLN5-213ENST00000636681 RESTQ13127 1097 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms