RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 ZNF467Q7Z7K2 595 aaPredicted RBP21.14■□□□□ 0.97
PNKP-225ENST00000636214 OSBPL3Q9H4L5 887 aa21.14■□□□□ 0.97
PNKP-225ENST00000636214 RNF146Q9NTX7 359 aa21.14■□□□□ 0.97
PNKP-225ENST00000636214 FAM184BQ9ULE4 1060 aa21.14■□□□□ 0.97
PNKP-225ENST00000636214 ZNF865P0CJ78 1059 aaPredicted RBP21.13■□□□□ 0.97
PNKP-225ENST00000636214 TAL1P17542 331 aaPredicted RBP21.13■□□□□ 0.97
PNKP-225ENST00000636214 ADCYAP1R1P41586 468 aa21.13■□□□□ 0.97
PNKP-225ENST00000636214 MDM2Q00987 491 aaPredicted RBP21.13■□□□□ 0.97
PNKP-225ENST00000636214 CCDC174Q6PII3 467 aa21.13■□□□□ 0.97
PNKP-225ENST00000636214 SLC39A5Q6ZMH5 540 aa21.13■□□□□ 0.97
PNKP-225ENST00000636214 TDHQ8IZJ6 230 aa21.13■□□□□ 0.97
PNKP-225ENST00000636214 FERMT2Q96AC1 680 aa21.13■□□□□ 0.97
PNKP-225ENST00000636214 SUPT16HQ9Y5B9 1047 aaKnown RBP21.13■□□□□ 0.97
PNKP-225ENST00000636214 DNAJC25-GNG10A0A024R161 153 aa21.12■□□□□ 0.97
PNKP-225ENST00000636214 POTEB2H3BUK9 544 aa21.12■□□□□ 0.97
PNKP-225ENST00000636214 PGK1P00558 417 aa21.12■□□□□ 0.97
PNKP-225ENST00000636214 FGRP09769 529 aa21.12■□□□□ 0.97
PNKP-225ENST00000636214 TOP1P11387 765 aaKnown RBP21.12■□□□□ 0.97
PNKP-225ENST00000636214 ALAS1P13196 640 aa21.12■□□□□ 0.97
PNKP-225ENST00000636214 AKNAD1Q5T1N1 836 aa21.12■□□□□ 0.97
PNKP-225ENST00000636214 CWC27Q6UX04 472 aaKnown RBP21.12■□□□□ 0.97
PNKP-225ENST00000636214 MAMDC4Q6UXC1 1216 aa21.12■□□□□ 0.97
PNKP-225ENST00000636214 AGBL1Q96MI9 1066 aa21.12■□□□□ 0.97
PNKP-225ENST00000636214 SPC25Q9HBM1 224 aa21.12■□□□□ 0.97
PNKP-225ENST00000636214 PRDM5Q9NQX1 630 aaPredicted RBP21.12■□□□□ 0.97
PNKP-225ENST00000636214 TCP11L1Q9NUJ3 509 aa21.12■□□□□ 0.97
PNKP-225ENST00000636214 PRR12Q9ULL5 1215 aa21.12■□□□□ 0.97
PNKP-225ENST00000636214 MCM3APO60318 1980 aa21.11■□□□□ 0.97
PNKP-225ENST00000636214 ARMCX2Q7L311 632 aa21.11■□□□□ 0.97
PNKP-225ENST00000636214 ESR2Q92731 530 aa21.11■□□□□ 0.97
PNKP-225ENST00000636214 TRERF1Q96PN7 1200 aa21.11■□□□□ 0.97
PNKP-225ENST00000636214 ABHD16BQ9H3Z7 469 aa21.11■□□□□ 0.97
PNKP-225ENST00000636214 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.11■□□□□ 0.97
PNKP-225ENST00000636214 CCPG1Q9ULG6 757 aa21.11■□□□□ 0.97
PNKP-225ENST00000636214 ZNF213O14771 459 aa21.1■□□□□ 0.97
PNKP-225ENST00000636214 ACVR2BQ13705 512 aa21.1■□□□□ 0.97
PNKP-225ENST00000636214 TRIM60Q495X7 471 aa21.1■□□□□ 0.97
PNKP-225ENST00000636214 PHF24Q9UPV7 400 aa21.1■□□□□ 0.97
PNKP-225ENST00000636214 TACC3Q9Y6A5 838 aa21.1■□□□□ 0.97
PNKP-225ENST00000636214 ASB14A6NK59 587 aa21.09■□□□□ 0.97
PNKP-225ENST00000636214 SNAI1O95863 264 aaPredicted RBP21.09■□□□□ 0.97
PNKP-225ENST00000636214 NT5C2P49902 561 aa21.09■□□□□ 0.97
PNKP-225ENST00000636214 CCDC178Q5BJE1 867 aa21.09■□□□□ 0.97
PNKP-225ENST00000636214 NUP133Q8WUM0 1156 aa21.09■□□□□ 0.97
PNKP-225ENST00000636214 LENG1Q96BZ8 264 aaPredicted RBP21.09■□□□□ 0.97
PNKP-225ENST00000636214 TMEM47Q9BQJ4 181 aa21.09■□□□□ 0.97
PNKP-225ENST00000636214 TSEN34Q9BSV6 310 aaKnown RBP21.09■□□□□ 0.97
PNKP-225ENST00000636214 DUSP11O75319 330 aaKnown RBP21.08■□□□□ 0.97
PNKP-225ENST00000636214 NOVP48745 357 aa21.08■□□□□ 0.97
PNKP-225ENST00000636214 SNAP25P60880 206 aa21.08■□□□□ 0.97
PNKP-225ENST00000636214 SYDE2Q5VT97 1194 aa21.08■□□□□ 0.97
PNKP-225ENST00000636214 RASGRP2Q7LDG7 609 aa21.08■□□□□ 0.97
PNKP-225ENST00000636214 IQCA1Q86XH1 822 aa21.08■□□□□ 0.97
PNKP-225ENST00000636214 LRCH3Q96II8 777 aa21.08■□□□□ 0.97
PNKP-225ENST00000636214 TTC14Q96N46 770 aa21.08■□□□□ 0.97
PNKP-225ENST00000636214 A1CFQ9NQ94 594 aaKnown RBP21.08■□□□□ 0.97
PNKP-225ENST00000636214 PNMA2Q9UL42 364 aa21.08■□□□□ 0.97
PNKP-225ENST00000636214 LAMA3Q16787 3333 aa21.08■□□□□ 0.96
PNKP-225ENST00000636214 SZT2Q5T011 3432 aa21.08■□□□□ 0.96
PNKP-225ENST00000636214 ZNF536O15090 1300 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 FRMPD2Q68DX3 1309 aaPredicted RBP21.07■□□□□ 0.96
PNKP-225ENST00000636214 SYNRGQ9UMZ2 1314 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 A0A1W2PQ45 241 aaPredicted RBP21.07■□□□□ 0.96
PNKP-225ENST00000636214 A0A1W2PQY0 241 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 SOX1O00570 391 aaPredicted RBP21.07■□□□□ 0.96
PNKP-225ENST00000636214 ICAM1P05362 532 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 CNTN2Q02246 1040 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 SNX17Q15036 470 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 LRIT3Q3SXY7 679 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 NSMFQ6X4W1 530 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 NOL8Q76FK4 1167 aaKnown RBP21.07■□□□□ 0.96
PNKP-225ENST00000636214 TBC1D10CQ8IV04 446 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 CCDC144CPQ8IYA2 1237 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 GPCPD1Q9NPB8 672 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 STARD7Q9NQZ5 370 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 CTNNA3Q9UI47 895 aa21.07■□□□□ 0.96
PNKP-225ENST00000636214 MOXD2PA6NHM9 499 aa21.06■□□□□ 0.96
PNKP-225ENST00000636214 ADAMTS4O75173 837 aa21.06■□□□□ 0.96
PNKP-225ENST00000636214 C6orf222P0C671 652 aaPredicted RBP21.06■□□□□ 0.96
PNKP-225ENST00000636214 SLC16A2P36021 539 aa21.06■□□□□ 0.96
PNKP-225ENST00000636214 IMMTQ16891 758 aaKnown RBP21.06■□□□□ 0.96
PNKP-225ENST00000636214 CCDC144BQ3MJ40 725 aa21.06■□□□□ 0.96
PNKP-225ENST00000636214 C1orf53Q5VUE5 145 aa21.06■□□□□ 0.96
PNKP-225ENST00000636214 PCSK9Q8NBP7 692 aaKnown RBP21.06■□□□□ 0.96
PNKP-225ENST00000636214 RANBP17Q9H2T7 1088 aaKnown RBP21.06■□□□□ 0.96
PNKP-225ENST00000636214 TTBK2Q6IQ55 1244 aa21.05■□□□□ 0.96
PNKP-225ENST00000636214 BTNL9Q6UXG8 535 aa21.05■□□□□ 0.96
PNKP-225ENST00000636214 FAM133AQ8N9E0 248 aa21.05■□□□□ 0.96
PNKP-225ENST00000636214 VTI1AQ96AJ9 217 aa21.05■□□□□ 0.96
PNKP-225ENST00000636214 FGD4Q96M96 766 aa21.05■□□□□ 0.96
PNKP-225ENST00000636214 DSCC1Q9BVC3 393 aa21.05■□□□□ 0.96
PNKP-225ENST00000636214 LAMA4Q16363 1823 aa21.05■□□□□ 0.96
PNKP-225ENST00000636214 NEDD4P46934 1319 aa21.04■□□□□ 0.96
PNKP-225ENST00000636214 PQBP1O60828 265 aaKnown RBP21.04■□□□□ 0.96
PNKP-225ENST00000636214 PDHBP11177 359 aa21.04■□□□□ 0.96
PNKP-225ENST00000636214 ACLYP53396 1101 aa21.04■□□□□ 0.96
PNKP-225ENST00000636214 TLE2Q04725 743 aa21.04■□□□□ 0.96
PNKP-225ENST00000636214 GLT1D1Q96MS3 346 aa21.04■□□□□ 0.96
PNKP-225ENST00000636214 KAT14Q9H8E8 782 aa21.04■□□□□ 0.96
PNKP-225ENST00000636214 PDLIM7Q9NR12 457 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms