RNA–Protein interactions for RNA: ENST00000635978.1

CHRNA7-208, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 903 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-208ENST00000635978 C16orf59Q7L2K0 433 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 CCAR1Q8IX12 1150 aaKnown RBP8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 PPM1EQ8WY54 764 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 FERMT2Q96AC1 680 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 NSUN4Q96CB9 384 aaKnown RBP8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 FAM227BQ96M60 508 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 TTC14Q96N46 770 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 GAS2L1Q99501 681 aaPredicted RBP8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 EPHX3Q9H6B9 360 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 C11orf16Q9NQ32 467 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 GINM1Q9NU53 330 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 PI4KBQ9UBF8 816 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 ABCF2Q9UG63 623 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 ZBTB21Q9ULJ3 1066 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 HCN4Q9Y3Q4 1203 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 SNX14Q9Y5W7 946 aa8.62□□□□□ -1.03
CHRNA7-208ENST00000635978 GRXCR1A8MXD5 290 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 RNF113AO15541 343 aaKnown RBP8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 PDIA4P13667 645 aaKnown RBP8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 FAAP100Q0VG06 881 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 UBE3CQ15386 1083 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 VPS53Q5VIR6 699 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 SPTY2D1Q68D10 685 aaPredicted RBP8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 SMYD5Q6GMV2 418 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 USP17L2Q6R6M4 530 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 CATSPERGQ6ZRH7 1159 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 ANKRD33Q7Z3H0 272 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 OXER1Q8TDS5 423 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 PTCD2Q8WV60 388 aaKnown RBP8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 TBX21Q9UL17 535 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 PALD1Q9ULE6 856 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 MUC6Q6W4X9 2439 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 ROBO3Q96MS0 1386 aa8.61□□□□□ -1.03
CHRNA7-208ENST00000635978 ZMYM6O95789 1325 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 SPDYE16A6NNV3 312 aaPredicted RBP8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 USP17L15C9J2P7 530 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 USP17L13C9JLJ4 530 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 USP17L11C9JVI0 530 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 USP17L18D6R9N7 530 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 USP17L22D6RA61 530 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 USP17L17D6RBQ6 530 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 USP17L19D6RCP7 530 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 USP17L20D6RJB6 530 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 GOLIM4O00461 696 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 COBLO75128 1261 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 GDF11O95390 407 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 RAG1P15918 1043 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 ADORA2AP29274 412 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 NEK4P51957 841 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 PTH1RQ03431 593 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 USP17L24Q0WX57 530 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 ANKRD1Q15327 319 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 CCDC85BQ15834 202 aaPredicted RBP8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 TMEM240Q5SV17 173 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 CREB3L3Q68CJ9 461 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 FBXL16Q8N461 479 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 SH3RF3Q8TEJ3 882 aaPredicted RBP8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 APPBP2Q92624 585 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 TOX2Q96NM4 488 aa8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 DNAJC2Q99543 621 aaKnown RBP8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 DHX36Q9H2U1 1008 aaKnown RBP8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 RBM8AQ9Y5S9 174 aaKnown RBP8.6□□□□□ -1.03
CHRNA7-208ENST00000635978 A0A1W2PQ45 241 aaPredicted RBP8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 A0A1W2PQY0 241 aa8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 SLC27A2O14975 620 aa8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 HMGB1P09429 215 aaKnown RBP8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 VCAM1P19320 739 aa8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 MCAMP43121 646 aa8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 KCNQ1P51787 676 aa8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 NUCB2P80303 420 aa8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 TFF2Q03403 129 aa8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 RAB3GAP1Q15042 981 aa8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 PRAMEF19Q5SWL8 479 aa8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 ZNF589Q86UQ0 364 aaPredicted RBP8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 FOXP4Q8IVH2 680 aaPredicted RBP8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 TEX11Q8IYF3 940 aa8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 SNX27Q96L92 541 aa8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 SH2B1Q9NRF2 756 aaPredicted RBP8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 IVNS1ABPQ9Y6Y0 642 aa8.59□□□□□ -1.03
CHRNA7-208ENST00000635978 FLT1P17948 1338 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 ARHGAP33O14559 1287 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 STRNO43815 780 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 PQBP1O60828 265 aaKnown RBP8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 GPR37L1O60883 481 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 TIMP1P01033 207 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 LDHCP07864 332 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 HSP90AA1P07900 732 aaKnown RBP8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 PTMSP20962 102 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 ADD2P35612 726 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 ZAP70P43403 619 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 GSTO1P78417 241 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 NFKBIBQ15653 356 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 TMEM31Q5JXX7 168 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 WDR78Q5VTH9 848 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 PI16Q6UXB8 463 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 RUFY3Q7L099 469 aa8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 ALYREFQ86V81 257 aaKnown RBP8.58□□□□□ -1.04
CHRNA7-208ENST00000635978 SLC44A5Q8NCS7 719 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms