RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 MAMDC4Q6UXC1 1216 aa18.45■□□□□ 0.54
SNRNP48-203ENST00000634363 ANKRD33Q7Z3H0 272 aa18.45■□□□□ 0.54
SNRNP48-203ENST00000634363 KLHDC9Q8NEP7 349 aa18.45■□□□□ 0.54
SNRNP48-203ENST00000634363 GLT1D1Q96MS3 346 aa18.45■□□□□ 0.54
SNRNP48-203ENST00000634363 HOMER2Q9NSB8 354 aa18.45■□□□□ 0.54
SNRNP48-203ENST00000634363 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.45■□□□□ 0.54
SNRNP48-203ENST00000634363 FEM1BQ9UK73 627 aa18.45■□□□□ 0.54
SNRNP48-203ENST00000634363 A0A0C4DFX4 3053 aa18.44■□□□□ 0.54
SNRNP48-203ENST00000634363 MOXD2PA6NHM9 499 aa18.44■□□□□ 0.54
SNRNP48-203ENST00000634363 M0R2C6 588 aa18.44■□□□□ 0.54
SNRNP48-203ENST00000634363 DUSP11O75319 330 aaKnown RBP18.44■□□□□ 0.54
SNRNP48-203ENST00000634363 GNAT2P19087 354 aa18.44■□□□□ 0.54
SNRNP48-203ENST00000634363 CCDC144BQ3MJ40 725 aa18.44■□□□□ 0.54
SNRNP48-203ENST00000634363 IFNL3Q8IZI9 196 aa18.44■□□□□ 0.54
SNRNP48-203ENST00000634363 TOX2Q96NM4 488 aa18.44■□□□□ 0.54
SNRNP48-203ENST00000634363 SPC25Q9HBM1 224 aa18.44■□□□□ 0.54
SNRNP48-203ENST00000634363 EPB41L4AQ9HCS5 686 aaPredicted RBP18.44■□□□□ 0.54
SNRNP48-203ENST00000634363 MTMR4Q9NYA4 1195 aa18.44■□□□□ 0.54
SNRNP48-203ENST00000634363 ROBO3Q96MS0 1386 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 IGKV6D-41A0A0C4DH26 115 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 PATL2C9JE40 543 aaKnown RBP18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 ATP2A1O14983 1001 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 TTLL1O95922 423 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 TIMP1P01033 207 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 ASGR1P07306 291 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 TSPY3P0CV98 308 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 TSPY8P0CW00 308 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 IKQ13123 557 aaPredicted RBP18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 GNASQ5JWF2 1037 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 ERICH6BQ5W0A0 696 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 SLFN13Q68D06 897 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 TICAM2Q86XR7 235 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 PCSK9Q8NBP7 692 aaKnown RBP18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 MKL1Q969V6 931 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 ABHD16BQ9H3Z7 469 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 SLC38A10Q9HBR0 1119 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 FBXO40Q9UH90 709 aa18.43■□□□□ 0.54
SNRNP48-203ENST00000634363 TMEM232C9JQI7 657 aa18.42■□□□□ 0.54
SNRNP48-203ENST00000634363 ADCY6O43306 1168 aa18.42■□□□□ 0.54
SNRNP48-203ENST00000634363 BMP3P12645 472 aa18.42■□□□□ 0.54
SNRNP48-203ENST00000634363 CNTN2Q02246 1040 aa18.42■□□□□ 0.54
SNRNP48-203ENST00000634363 ZMYM1Q5SVZ6 1142 aa18.42■□□□□ 0.54
SNRNP48-203ENST00000634363 CCSAPQ6IQ19 270 aaPredicted RBP18.42■□□□□ 0.54
SNRNP48-203ENST00000634363 NOL8Q76FK4 1167 aaKnown RBP18.42■□□□□ 0.54
SNRNP48-203ENST00000634363 ZNF467Q7Z7K2 595 aaPredicted RBP18.42■□□□□ 0.54
SNRNP48-203ENST00000634363 CHST13Q8NET6 341 aa18.42■□□□□ 0.54
SNRNP48-203ENST00000634363 TFAP4Q01664 338 aa18.41■□□□□ 0.54
SNRNP48-203ENST00000634363 PDE4BQ07343 736 aa18.41■□□□□ 0.54
SNRNP48-203ENST00000634363 TTC22Q5TAA0 569 aa18.41■□□□□ 0.54
SNRNP48-203ENST00000634363 ARMCX2Q7L311 632 aa18.41■□□□□ 0.54
SNRNP48-203ENST00000634363 CCDC144CPQ8IYA2 1237 aa18.41■□□□□ 0.54
SNRNP48-203ENST00000634363 SEC62Q99442 399 aaKnown RBP18.41■□□□□ 0.54
SNRNP48-203ENST00000634363 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.41■□□□□ 0.541e-8■■■■□ 20.9
SNRNP48-203ENST00000634363 NACAP1Q9BZK3 213 aa18.41■□□□□ 0.54
SNRNP48-203ENST00000634363 ELP1O95163 1332 aa18.41■□□□□ 0.54
SNRNP48-203ENST00000634363 MROH7Q68CQ1 1323 aa18.41■□□□□ 0.54
SNRNP48-203ENST00000634363 LAMA2P24043 3122 aaKnown RBP18.4■□□□□ 0.54
SNRNP48-203ENST00000634363 SLC3A2P08195 630 aaKnown RBP18.4■□□□□ 0.54
SNRNP48-203ENST00000634363 DNAJB2P25686 324 aa18.4■□□□□ 0.54
SNRNP48-203ENST00000634363 GRIN2CQ14957 1233 aa18.4■□□□□ 0.54
SNRNP48-203ENST00000634363 MFSD5Q6N075 450 aa18.4■□□□□ 0.54
SNRNP48-203ENST00000634363 CCDC129Q6ZRS4 1044 aa18.4■□□□□ 0.54
SNRNP48-203ENST00000634363 GMCL1P1Q8NEA9 526 aa18.4■□□□□ 0.54
SNRNP48-203ENST00000634363 NEDD1Q8NHV4 660 aa18.4■□□□□ 0.54
SNRNP48-203ENST00000634363 FGD4Q96M96 766 aa18.4■□□□□ 0.54
SNRNP48-203ENST00000634363 PPP1R12CQ9BZL4 782 aa18.4■□□□□ 0.54
SNRNP48-203ENST00000634363 UNC80Q8N2C7 3258 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 CUL9Q8IWT3 2517 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 A0A0U1RQG5 324 aaPredicted RBP18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 ARVCFO00192 962 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 HIP1O00291 1037 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 CSF2RAP15509 400 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 CST5P28325 142 aaPredicted RBP18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 CDK7P50613 346 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 STAT2P52630 851 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 OAZ1P54368 228 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 GJA9P57773 515 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 BEX3Q00994 111 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 CHURC1Q8WUH1 139 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 AGBL1Q96MI9 1066 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 NAPBQ9H115 298 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 ZNF576Q9H609 170 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 HELLSQ9NRZ9 838 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 DIAPH3Q9NSV4 1193 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 TBX21Q9UL17 535 aa18.39■□□□□ 0.53
SNRNP48-203ENST00000634363 TMEM265A0A087WTH1 108 aa18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 TLR3O15455 904 aaKnown RBP18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 ACRP10323 421 aa18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 GSPT1P15170 499 aaKnown RBP18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 SDSP20132 328 aa18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 MCCP23508 829 aa18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 SLC1A4P43007 532 aa18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 SNAP25P60880 206 aa18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 TNFAIP2Q03169 654 aa18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 PPIGQ13427 754 aaKnown RBP eCLIP18.38■□□□□ 0.537e-6■■□□□ 12.3
SNRNP48-203ENST00000634363 TMEM199Q8N511 208 aa18.38■□□□□ 0.53
SNRNP48-203ENST00000634363 UPF3AQ9H1J1 476 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms