RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 PPM1KQ8N3J5 372 aa6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 FAM46AQ96IP4 442 aaKnown RBP6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 IER2Q9BTL4 223 aa6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 DSCC1Q9BVC3 393 aa6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 CGGBP1Q9UFW8 167 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 TPX2Q9ULW0 747 aaKnown RBP6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 ATP8A1Q9Y2Q0 1164 aa6.88□□□□□ -1.31
TRAPPC9-216ENST00000634178 RUSC2Q8N2Y8 1516 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 A0A087X0B3 334 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 SLITRK5O94991 958 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 KCNH1O95259 989 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 CAPNS1P04632 268 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 PDGFRBP09619 1106 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 NAT1P18440 290 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 ITIH2P19823 946 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 PMLP29590 882 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 FLT3P36888 993 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 KIR3DL1P43629 444 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 ZNF445P59923 1031 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 NFKB2Q00653 900 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 MAP4K2Q12851 820 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 GRIK4Q16099 956 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 CCDC181Q5TID7 509 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 YOD1Q5VVQ6 348 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 CDPF1Q6NVV7 123 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 PAOXQ6QHF9 649 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 SHISA2Q6UWI4 295 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 FERMT3Q86UX7 667 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 LRRTM3Q86VH5 581 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 PRPF38AQ8NAV1 312 aaKnown RBP6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 ADCY4Q8NFM4 1077 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 FBLIM1Q8WUP2 373 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 OSBP2Q969R2 916 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 IRF2BPLQ9H1B7 796 aa6.87□□□□□ -1.31
TRAPPC9-216ENST00000634178 COL17A1Q9UMD9 1497 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 WRNQ14191 1432 aaPredicted RBP eCLIP6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 FAM95CA0A1B0GW59 222 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 SHOXO15266 292 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 ALX3O95076 343 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 NPTXRO95502 500 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 KCNJ6P48051 423 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 AMPD2Q01433 879 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 GTF2IRD2BQ6EKJ0 949 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 NOL8Q76FK4 1167 aaKnown RBP6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 MAMDC2Q7Z304 686 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 GTF2IRD2Q86UP8 949 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 WFDC12Q8WWY7 111 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 PTPRN2Q92932 1015 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 UTP4Q969X6 686 aaKnown RBP6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 KRTAP4-12Q9BQ66 201 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 NKX2-4Q9H2Z4 354 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 NOL6Q9H6R4 1146 aaKnown RBP6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 CYP26B1Q9NR63 512 aa6.86□□□□□ -1.31
TRAPPC9-216ENST00000634178 PLB1Q6P1J6 1458 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 B4E1Z4 1266 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 BMP3P12645 472 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 MAP4P27816 1152 aaKnown RBP6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 POU4F1Q01851 419 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 PPP2R5DQ14738 602 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 SGO2Q562F6 1265 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 CWF19L1Q69YN2 538 aaKnown RBP6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 CNNM4Q6P4Q7 775 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 DDX46Q7L014 1031 aaKnown RBP6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 FIBCD1Q8N539 461 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 RIN3Q8TB24 985 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 ENOX1Q8TC92 643 aaKnown RBP6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 BTN2A2Q8WVV5 523 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 DDX1Q92499 740 aaKnown RBP6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 MYRFLQ96LU7 910 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 CLUHP3Q96NS8 147 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 PRDM14Q9GZV8 571 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 PRDM5Q9NQX1 630 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 KLHL42Q9P2K6 505 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 NDOR1Q9UHB4 597 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 GTF2IRD1Q9UHL9 959 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 RNF112Q9ULX5 631 aa6.85□□□□□ -1.31
TRAPPC9-216ENST00000634178 GSG1L2A8MUP6 293 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 DLX3O60479 287 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 ASLP04424 464 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 SCG5P05408 212 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 GSNP06396 782 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 SNRPB2P08579 225 aaKnown RBP6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 GRIA2P42262 883 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 IREB2P48200 963 aaKnown RBP6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 GFRA1P56159 465 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 SFRP5Q5T4F7 317 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 TOP6BLQ8N6T0 577 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 BRF1Q92994 677 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 MAGEB10Q96LZ2 347 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 UBL7Q96S82 380 aaPredicted RBP6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 PCGF6Q9BYE7 350 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 LGR6Q9HBX8 967 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 TEX14Q8IWB6 1497 aa6.84□□□□□ -1.31
TRAPPC9-216ENST00000634178 ABCC2Q92887 1545 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 AQP7O14520 342 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 DHX15O43143 795 aaKnown RBP6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 SIGLEC6O43699 453 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 NOS3P29474 1203 aa6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 NOP2P46087 812 aaKnown RBP6.83□□□□□ -1.32
TRAPPC9-216ENST00000634178 EXOSC10Q01780 885 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms