RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 CEP57L1Q8IYX8 460 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 ABTB2Q8N961 1025 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 NAT8LQ8N9F0 302 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 SMCR8Q8TEV9 937 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-213ENST00000630925 DPF3Q92784 378 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 MOGAT1Q96PD6 335 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 RMDN3Q96TC7 470 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 CCDC94Q9BW85 323 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-213ENST00000630925 LSM14BQ9BX40 385 aaKnown RBP5.59□□□□□ -1.51
SDCBP-213ENST00000630925 UNC45AQ9H3U1 944 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 AGO4Q9HCK5 861 aaKnown RBP5.59□□□□□ -1.51
SDCBP-213ENST00000630925 LRFN2Q9ULH4 789 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 GPSM3Q9Y4H4 160 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 SIGLEC1Q9BZZ2 1709 aa5.59□□□□□ -1.51
SDCBP-213ENST00000630925 CENPJQ9HC77 1338 aaPredicted RBP5.59□□□□□ -1.51
SDCBP-213ENST00000630925 PTPRGP23470 1445 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 ANKRD18BA2A2Z9 1011 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 FRS3O43559 492 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 TMEM127O75204 238 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 DDX58O95786 925 aaKnown RBP5.59□□□□□ -1.52
SDCBP-213ENST00000630925 STIP1P31948 543 aaKnown RBP5.59□□□□□ -1.52
SDCBP-213ENST00000630925 EIF6P56537 245 aaKnown RBP5.59□□□□□ -1.52
SDCBP-213ENST00000630925 DNM1Q05193 864 aaKnown RBP5.59□□□□□ -1.52
SDCBP-213ENST00000630925 AP3B2Q13367 1082 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 MOGSQ13724 837 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 CCNG2Q16589 344 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 ITPRIPL1Q6GPH6 555 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 CHST15Q7LFX5 561 aaPredicted RBP5.59□□□□□ -1.52
SDCBP-213ENST00000630925 GPR155Q7Z3F1 870 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 TEX11Q8IYF3 940 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 FAM43AQ8N2R8 423 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 CBARPQ8N350 705 aaPredicted RBP5.59□□□□□ -1.52
SDCBP-213ENST00000630925 NLRP3Q96P20 1036 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 SEC62Q99442 399 aaKnown RBP5.59□□□□□ -1.52
SDCBP-213ENST00000630925 CHCHD6Q9BRQ6 235 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 WDR12Q9GZL7 423 aaKnown RBP5.59□□□□□ -1.52
SDCBP-213ENST00000630925 KCTD5Q9NXV2 234 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 WDR35Q9P2L0 1181 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 SAP30BPQ9UHR5 308 aaKnown RBP5.59□□□□□ -1.52
SDCBP-213ENST00000630925 ANKRD6Q9Y2G4 727 aa5.59□□□□□ -1.52
SDCBP-213ENST00000630925 FRMPD1Q5SYB0 1578 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 FZD9O00144 591 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 PPEF1O14829 653 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-213ENST00000630925 CPNE3O75131 537 aaKnown RBP5.58□□□□□ -1.52
SDCBP-213ENST00000630925 KRT1P04264 644 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 ABCD1P33897 745 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 MRPS35P82673 323 aaKnown RBP5.58□□□□□ -1.52
SDCBP-213ENST00000630925 DMTNQ08495 405 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 PPFIA1Q13136 1202 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 DHCR24Q15392 516 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 PDCD2Q16342 344 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-213ENST00000630925 SHROOM1Q2M3G4 852 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-213ENST00000630925 FNDC3BQ53EP0 1204 aaKnown RBP5.58□□□□□ -1.52
SDCBP-213ENST00000630925 TATDN1Q6P1N9 297 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 POTEAQ6S8J7 498 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 TMCO3Q6UWJ1 677 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 SLITRK4Q8IW52 837 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 CPA6Q8N4T0 437 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 PHC3Q8NDX5 983 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 EDEM1Q92611 657 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 SYAP1Q96A49 352 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-213ENST00000630925 RBM18Q96H35 190 aaKnown RBP5.58□□□□□ -1.52
SDCBP-213ENST00000630925 ASB2Q96Q27 587 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 SLC26A8Q96RN1 970 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 SLC26A6Q9BXS9 759 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 AAASQ9NRG9 546 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 ZNF358Q9NW07 568 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 ARGLU1Q9NWB6 273 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-213ENST00000630925 ANKIB1Q9P2G1 1089 aa5.58□□□□□ -1.52
SDCBP-213ENST00000630925 ZCCHC11Q5TAX3 1644 aaKnown RBP5.58□□□□□ -1.52
SDCBP-213ENST00000630925 CD109Q6YHK3 1445 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 A6NNZ2 444 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 MPHOSPH10O00566 681 aaKnown RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 BRINP1O60477 761 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 DNTTP04053 509 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 SLC10A3P09131 477 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 ATP6V1B1P15313 513 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 RHCEP18577 417 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 CYP2C19P33261 490 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 MCM4P33991 863 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 CCNFP41002 786 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 SEPHS1P49903 392 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 PDE6CP51160 858 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 SH3BGRP55822 239 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 TMPRSS15P98073 1019 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 RHDQ02161 417 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 ABCB5Q2M3G0 1257 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 CDC37L1Q7L3B6 337 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 ENOSF1Q7L5Y1 443 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 RETREG3Q86VR2 466 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 GALNT13Q8IUC8 556 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 ZBTB38Q8NAP3 1195 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 MSANTD4Q8NCY6 345 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 SPATA18Q8TC71 538 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 SSH3Q8TE77 659 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 DDX1Q92499 740 aaKnown RBP5.57□□□□□ -1.52
SDCBP-213ENST00000630925 GMCL1Q96IK5 515 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 UBXN10Q96LJ8 280 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 AIFM3Q96NN9 605 aa5.57□□□□□ -1.52
SDCBP-213ENST00000630925 GTPBP4Q9BZE4 634 aaKnown RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms