RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 RPS6KB1P23443 525 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 NLRP12P59046 1061 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 ITKQ08881 620 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 MAGEF1Q9HAY2 307 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 MYCLP12524 364 aaPredicted RBP14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 ZNF75DP51815 510 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 KLC3Q6P597 504 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 PDXDC1Q6P996 788 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 TMTC3Q6ZXV5 915 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 CCHCR1Q8TD31 782 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 SLC52A2Q9HAB3 445 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 XPAP23025 273 aaPredicted RBP14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 LRRC43Q8N309 656 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 SUN1O94901 812 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 GINS2Q9Y248 185 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 ELF2Q15723 593 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 PIK3AP1Q6ZUJ8 805 aa14.41□□□□□ -0.1
SYNGAP1-208ENST00000629380 MAP3K19Q56UN5 1328 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 IQCB1Q15051 598 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 STX1BP61266 288 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 APBA1Q02410 837 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 TMEM247A6NEH6 219 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 METTL13Q8N6R0 699 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 PPWD1Q96BP3 646 aaKnown RBP14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 STAT1P42224 750 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 HERC4Q5GLZ8 1057 aaPredicted RBP14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 KLHL7Q8IXQ5 586 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 GDAP1L1Q96MZ0 367 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 EYA1Q99502 592 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 OAS2P29728 719 aaKnown RBP14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 PABPC4Q13310 644 aaKnown RBP eCLIP14.4□□□□□ -0.11e-6■■■■■ 56.2
SYNGAP1-208ENST00000629380 PCDHB13Q9Y5F0 798 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 MAN1A2O60476 641 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 ZNF202O95125 648 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 CASP2P42575 452 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 BEND3Q5T5X7 828 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 LRCH2Q5VUJ6 765 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 CDC37L1Q7L3B6 337 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 CHMP6Q96FZ7 201 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 MYCBPQ99417 103 aaPredicted RBP14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 MROH5Q6ZUA9 1318 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 AP1ARQ63HQ0 302 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 BBS5Q8N3I7 341 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 IFT122Q9HBG6 1241 aa14.4□□□□□ -0.1
SYNGAP1-208ENST00000629380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.4□□□□□ -0.17e-8■□□□□ 9
SYNGAP1-208ENST00000629380 LRRD1A4D1F6 860 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 MBD4O95243 580 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 IFNB1P01574 187 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 IL9RQ01113 521 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 OTUD7BQ6GQQ9 843 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 ADPGKQ9BRR6 497 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 PAWRQ96IZ0 340 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 LSM14BQ9BX40 385 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 EFCAB14O75071 495 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 CNKSR1Q969H4 720 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 PTPRKQ15262 1439 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 GNPTABQ3T906 1256 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 ELMSAN1Q6PJG2 1045 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 VPS16Q9H269 839 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 AS3MTQ9HBK9 375 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 HIBADHP31937 336 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 C2CD5Q86YS7 1000 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 LRRC8CQ8TDW0 803 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 SNX29Q8TEQ0 813 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 QTRT2Q9H974 415 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 E9PMD0 336 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 HGSO14964 777 aaPredicted RBP14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 EP400NLQ6ZTU2 488 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 FAM81BQ96LP2 452 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 SBNO2Q9Y2G9 1366 aa14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 NVLO15381 856 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-208ENST00000629380 BAG2O95816 211 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 TCEANC2Q96MN5 208 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 PIK3CAP42336 1068 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 ANO3Q9BYT9 981 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 MAD1L1Q9Y6D9 718 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 MYRIPQ8NFW9 859 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 NLGN1Q8N2Q7 840 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 CFAP61Q8NHU2 1237 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 DEPTORQ8TB45 409 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 BPIFB4P59827 614 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 TFCP2Q12800 502 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 DCAF15Q66K64 600 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 CCDC138Q96M89 665 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 BAIAP2L1Q9UHR4 511 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 GNGT2O14610 69 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 MCF2L2Q86YR7 1114 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 EFCAB13Q8IY85 973 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 FBXO41Q8TF61 875 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 CAPS2Q9BXY5 557 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 ST7Q9NRC1 585 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 PREX2Q70Z35 1606 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 SPDYE2BA6NHP3 402 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 ZNF233A6NK53 670 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 SPDYE6P0CI01 402 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 NLRX1Q86UT6 975 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 NME8Q8N427 588 aa14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 SMCR8Q8TEV9 937 aaPredicted RBP14.38□□□□□ -0.11
SYNGAP1-208ENST00000629380 HESX1Q9UBX0 185 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms