RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 AGTPBP1Q9UPW5 1226 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 ECM29Q5VYK3 1845 aa5.83□□□□□ -1.48
LINC00550-201ENST00000629293 RPAP1Q9BWH6 1393 aaPredicted RBP5.82□□□□□ -1.48
LINC00550-201ENST00000629293 PPP4CP60510 307 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 SHROOM1Q2M3G4 852 aaPredicted RBP5.82□□□□□ -1.48
LINC00550-201ENST00000629293 ZBTB33Q86T24 672 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 FTSJ3Q8IY81 847 aaKnown RBP5.82□□□□□ -1.48
LINC00550-201ENST00000629293 DEFB123Q8N688 67 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 ZNF511Q8NB15 262 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 ZNF280CQ8ND82 737 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 FAM129BQ96TA1 746 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 ASCC2Q9H1I8 757 aaPredicted RBP5.82□□□□□ -1.48
LINC00550-201ENST00000629293 IGFBP4P22692 258 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 CNGA1P29973 690 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 NAA30Q147X3 362 aaPredicted RBP5.82□□□□□ -1.48
LINC00550-201ENST00000629293 TSNAXIP1Q2TAA8 658 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 TGFBRAP1Q8WUH2 860 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 PIK3R5Q8WYR1 880 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 FEZ1Q99689 392 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 IDI2Q9BXS1 227 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 ZBTB40Q9NUA8 1239 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 TMOD4Q9NZQ9 345 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 EYSQ5T1H1 3165 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 MROH7-TTC4A0A0A0MT08 1334 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 ADGRA2Q96PE1 1338 aa5.82□□□□□ -1.48
LINC00550-201ENST00000629293 HMGCRP04035 888 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 LSM11P83369 360 aaKnown RBP eCLIP5.81□□□□□ -1.48
LINC00550-201ENST00000629293 FOXK2Q01167 660 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 G3BP1Q13283 466 aaKnown RBP eCLIP5.81□□□□□ -1.48
LINC00550-201ENST00000629293 FAM110CQ1W6H9 321 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 SMC5Q8IY18 1101 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 TMEM57Q8N5G2 664 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 SPATA5Q8NB90 893 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 SPATA32Q96LK8 384 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 HMG20BQ9P0W2 317 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 PALD1Q9ULE6 856 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.81□□□□□ -1.48
LINC00550-201ENST00000629293 GPR182O15218 404 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 CIAO1O76071 339 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 LDHCP07864 332 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 PABPC4Q13310 644 aaKnown RBP eCLIP5.81□□□□□ -1.48
LINC00550-201ENST00000629293 SH3RF3Q8TEJ3 882 aaPredicted RBP5.81□□□□□ -1.48
LINC00550-201ENST00000629293 API5Q9BZZ5 524 aaKnown RBP5.81□□□□□ -1.48
LINC00550-201ENST00000629293 UBE2OQ9C0C9 1292 aaKnown RBP5.81□□□□□ -1.48
LINC00550-201ENST00000629293 AKAP2Q9Y2D5 859 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 RHBDL3P58872 404 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 FANCCQ00597 558 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 RRP1BQ14684 758 aaKnown RBP5.81□□□□□ -1.48
LINC00550-201ENST00000629293 TTC39AQ5SRH9 613 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 P2RX7Q99572 595 aaKnown RBP5.81□□□□□ -1.48
LINC00550-201ENST00000629293 HDAC5Q9UQL6 1122 aa5.81□□□□□ -1.48
LINC00550-201ENST00000629293 IPO8O15397 1037 aaKnown RBP5.8□□□□□ -1.48
LINC00550-201ENST00000629293 IDH1O75874 414 aaKnown RBP5.8□□□□□ -1.48
LINC00550-201ENST00000629293 MPSTP25325 297 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 CAP2P40123 477 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 MAGEA10P43363 369 aaPredicted RBP5.8□□□□□ -1.48
LINC00550-201ENST00000629293 ERVK-9P63128 1117 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 GSTO1P78417 241 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 RAB3GAP1Q15042 981 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 NAA16Q6N069 864 aaPredicted RBP5.8□□□□□ -1.48
LINC00550-201ENST00000629293 UBE2Q1Q7Z7E8 422 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 MIGA1Q8NAN2 632 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 ZNF384Q8TF68 577 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 TRIB2Q92519 343 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 ARHGAP45Q92619 1136 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 TBC1D32Q96NH3 1257 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 OSBPL5Q9H0X9 879 aaPredicted RBP5.8□□□□□ -1.48
LINC00550-201ENST00000629293 GAKO14976 1311 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 A0A1B0GUL6 1792 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 GCLCP48506 637 aaPredicted RBP5.8□□□□□ -1.48
LINC00550-201ENST00000629293 CCL14Q16627 93 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 ANO1Q5XXA6 986 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 ITPRIPQ8IWB1 547 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 UBXN4Q92575 508 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 NSUN4Q96CB9 384 aaKnown RBP5.8□□□□□ -1.48
LINC00550-201ENST00000629293 PORCNQ9H237 461 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 TXNRD2Q9NNW7 524 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 COPRSQ9NQ92 184 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 PAK6Q9NQU5 681 aaPredicted RBP5.8□□□□□ -1.48
LINC00550-201ENST00000629293 RPTORQ8N122 1335 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 ATRNL1Q5VV63 1379 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 ARAP2Q8WZ64 1704 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 GPR75-ASB3A0A0A6YYF3 556 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 GNAI3P08754 354 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 ZKSCAN1P17029 563 aaPredicted RBP5.8□□□□□ -1.48
LINC00550-201ENST00000629293 MCAMP43121 646 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 LCE2DQ5TA82 110 aaPredicted RBP5.8□□□□□ -1.48
LINC00550-201ENST00000629293 C11orf49Q9H6J7 331 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 AS3MTQ9HBK9 375 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 PCDHB11Q9Y5F2 797 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 SALL1Q9NSC2 1324 aa5.8□□□□□ -1.48
LINC00550-201ENST00000629293 PNMA6EA0A0J9YXQ4 647 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 A0A1W2PRU2 124 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 BAG3O95817 575 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 ADH1BP00325 375 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 ASNSP08243 561 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 HERVK_113P62684 666 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 USP4Q13107 963 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 NFKBIBQ15653 356 aa5.79□□□□□ -1.48
LINC00550-201ENST00000629293 ZNF295-AS1Q8N0V1 137 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms