RNA–Protein interactions for RNA: ENST00000628867.1

SPTAN1-215, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-215ENST00000628867 PPP4R3CPQ6ZMV5 832 aa9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 KIFC2Q96AC6 838 aa9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 SCLYQ96I15 445 aa9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 CRBNQ96SW2 442 aa9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 SLC9A7Q96T83 725 aa9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 RIOK1Q9BRS2 568 aaKnown RBP9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 NOC4LQ9BVI4 516 aaKnown RBP9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 TRPV6Q9H1D0 765 aa9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 UPF3AQ9H1J1 476 aaKnown RBP9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 DCP1AQ9NPI6 582 aaPredicted RBP9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 ATP8A2Q9NTI2 1148 aa9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 ZNF214Q9UL59 606 aaPredicted RBP9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 SIPA1L1O43166 1804 aa9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 ZNF236Q9UL36 1845 aa9.17□□□□□ -0.94
SPTAN1-215ENST00000628867 UMODL1Q5DID0 1318 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 ZNF532Q9HCE3 1301 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 BDP1A6H8Y1 2624 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 KCNJ6P48051 423 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 BRDTQ58F21 947 aaPredicted RBP9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 FAM47CQ5HY64 1035 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 TLK2Q86UE8 772 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 AACSQ86V21 672 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 ERC1Q8IUD2 1116 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 SIAH1Q8IUQ4 282 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 CCDC144CPQ8IYA2 1237 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 GJD3Q8N144 294 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 CHST13Q8NET6 341 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 PHOSPHO2Q8TCD6 241 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 EAF2Q96CJ1 260 aaPredicted RBP9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 DNAJC2Q99543 621 aaKnown RBP9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 MKNK2Q9HBH9 465 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 RAVER2Q9HCJ3 691 aaKnown RBP9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 HOMER2Q9NSB8 354 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 NOD1Q9Y239 953 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 COG6Q9Y2V7 657 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 EYSQ5T1H1 3165 aa9.16□□□□□ -0.94
SPTAN1-215ENST00000628867 MYH1P12882 1939 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 USP17L12C9JPN9 530 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 USP17L21D6R901 530 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 B4GALT4O60513 344 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 PDE6AP16499 860 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 RARSP54136 660 aaKnown RBP9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 PSMC6P62333 389 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 IKQ13123 557 aaPredicted RBP9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 TTLL4Q14679 1199 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 KRT40Q6A162 431 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 IQSEC1Q6DN90 963 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 LCORLQ8N3X6 602 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 SSH3Q8TE77 659 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 NUP88Q99567 741 aaPredicted RBP9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 ARMT1Q9H993 441 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 TLR7Q9NYK1 1049 aaKnown RBP9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 RIPK3Q9Y572 518 aa9.15□□□□□ -0.94
SPTAN1-215ENST00000628867 ZNF536O15090 1300 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 DNAJC25-GNG10A0A024R161 153 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 F5H6K3 240 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 GOLIM4O00461 696 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 IFIT2P09913 472 aaKnown RBP9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 CYP2C9P11712 490 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 RFC2P35250 354 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 CHMP4BP1P59074 171 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 TAP1Q03518 808 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 EVX2Q03828 476 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 KLRC3Q07444 240 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 GRB10Q13322 594 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 BFSP2Q13515 415 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 POLA2Q14181 598 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 HSP90AB4PQ58FF6 505 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 C12orf60Q5U649 245 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 EP400NLQ6ZTU2 488 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 KIAA1211Q6ZU35 1233 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 EEPD1Q7L9B9 569 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 ZNF444Q8N0Y2 327 aaPredicted RBP9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 STK11IPQ8N1F8 1099 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 SLC43A3Q8NBI5 491 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 SNX27Q96L92 541 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 WNT8AQ9H1J5 351 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 ALDH8A1Q9H2A2 487 aaPredicted RBP9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 POLR3EQ9NVU0 708 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 LMCD1Q9NZU5 365 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 CLIP2Q9UDT6 1046 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 FEM1BQ9UK73 627 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 SLC4A4Q9Y6R1 1079 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 CDK5RAP2Q96SN8 1893 aa9.14□□□□□ -0.95
SPTAN1-215ENST00000628867 CYP2D7A0A087X1C5 515 aa9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 ATP2A1O14983 1001 aa9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 ADCY6O43306 1168 aa9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 PRKAB2O43741 272 aa9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 MBD4O95243 580 aa9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 MYL3P08590 195 aa9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 FDX1P10109 184 aa9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 TRIM27P14373 513 aa9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 PUS10Q3MIT2 529 aaKnown RBP9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 HERC6Q8IVU3 1022 aa9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 FTSJ3Q8IY81 847 aaKnown RBP9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 CLASRPQ8N2M8 674 aaKnown RBP9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 REPS2Q8NFH8 660 aa9.13□□□□□ -0.95
SPTAN1-215ENST00000628867 KHSRPQ92945 711 aaKnown RBP eCLIP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms