RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 SPP2Q13103 211 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 GRB14Q14449 540 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 LPAL2Q16609 132 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 RTL5Q5HYW3 569 aaPredicted RBP3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 KIAA1211LQ6NV74 962 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 POTEHQ6S545 545 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 COPS6Q7L5N1 327 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 TMCO2Q7Z6W1 182 aaPredicted RBP3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 TXNRD3Q86VQ6 643 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 FAM151AQ8WW52 585 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 ZNF428Q96B54 188 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 FAM89AQ96GI7 184 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 REPIN1Q9BWE0 567 aaKnown RBP3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 SEZ6LQ9BYH1 1024 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 LMAN2LQ9H0V9 348 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 CCDC86Q9H6F5 360 aaKnown RBP3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 ERVK-5Q9HDB9 667 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 FBXO4Q9UKT5 387 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 WASF3Q9UPY6 502 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 ROCK2O75116 1388 aaKnown RBP3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 ZZEF1O43149 2961 aa3.97□□□□□ -1.77
SCARNA4.1-201ENST00000628597 FAM221BA6H8Z2 402 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 SLC28A2O43868 658 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 CTNND1O60716 968 aaKnown RBP3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 ADAMTS4O75173 837 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 CSPG5O95196 566 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 ASGR2P07307 311 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 DCNP07585 359 aaKnown RBP3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 C6orf222P0C671 652 aaPredicted RBP3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 GTF2F1P35269 517 aaKnown RBP eCLIP3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 LY6DQ14210 128 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 MFSD14BQ5SR56 506 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 STPG1Q5TH74 334 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 TMEM192Q8IY95 271 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 ZNF280CQ8ND82 737 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 KLHDC9Q8NEP7 349 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 AGBL1Q96MI9 1066 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 CDC5LQ99459 802 aaKnown RBP3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 TBC1D2Q9BYX2 928 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 ANKRD2Q9GZV1 360 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 RSPH6AQ9H0K4 717 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 SIL1Q9H173 461 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 SPATA6Q9NWH7 488 aaPredicted RBP3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 CLEC1BQ9P126 229 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 IL17BQ9UHF5 180 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 MINPP1Q9UNW1 487 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 SIT1Q9Y3P8 196 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 DSPP15924 2871 aaKnown RBP3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 KALRNO60229 2985 aa3.96□□□□□ -1.78
SCARNA4.1-201ENST00000628597 LRRK2Q5S007 2527 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 VPS13AQ96RL7 3174 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 TRIOO75962 3097 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 WDR46O15213 610 aaKnown RBP3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 STRNO43815 780 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 HYAL3O43820 417 aaPredicted RBP3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 SRGAP2BP0DMP2 458 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 ARP10275 920 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 ADORA2AP29274 412 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 HOXA7P31268 230 aaPredicted RBP3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 PLCD1P51178 756 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 WDR5P61964 334 aaKnown RBP3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 SCAPQ12770 1279 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 TCP10Q12799 353 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 PROSER3Q2NL68 480 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 TAF1BQ53T94 588 aaPredicted RBP3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 GNASQ5JWF2 1037 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 ZNF804AQ7Z570 1209 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 FBXO11Q86XK2 927 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 CELF5Q8N6W0 485 aaKnown RBP3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 EFHBQ8N7U6 833 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 ZBTB44Q8NCP5 570 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 GAS2L2Q8NHY3 880 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 SP7Q8TDD2 431 aaPredicted RBP3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 SUSD6Q92537 303 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 TEKT1Q969V4 418 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 VWCEQ96DN2 955 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 CCDC85AQ96PX6 553 aaPredicted RBP3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 MYD88Q99836 296 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 TRPV6Q9H1D0 765 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 AS3MTQ9HBK9 375 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 LIMD1Q9UGP4 676 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 FAM184BQ9ULE4 1060 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 BARX2Q9UMQ3 279 aaPredicted RBP3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 CNPY2Q9Y2B0 182 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 RAXQ9Y2V3 346 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 RABGAP1Q9Y3P9 1069 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 FARP1Q9Y4F1 1045 aaPredicted RBP3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 FBN2P35556 2912 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 PHIPQ8WWQ0 1821 aa3.95□□□□□ -1.78
SCARNA4.1-201ENST00000628597 GBF1Q92538 1859 aa3.94□□□□□ -1.78
SCARNA4.1-201ENST00000628597 ITPR1Q14643 2758 aa3.94□□□□□ -1.78
SCARNA4.1-201ENST00000628597 TENM4Q6N022 2769 aa3.94□□□□□ -1.78
SCARNA4.1-201ENST00000628597 B8ZZF3 427 aa3.94□□□□□ -1.78
SCARNA4.1-201ENST00000628597 GIPC1O14908 333 aa3.94□□□□□ -1.78
SCARNA4.1-201ENST00000628597 LILRB5O75023 590 aa3.94□□□□□ -1.78
SCARNA4.1-201ENST00000628597 CABYRO75952 493 aa3.94□□□□□ -1.78
SCARNA4.1-201ENST00000628597 RB1P06400 928 aa3.94□□□□□ -1.78
SCARNA4.1-201ENST00000628597 HMOX1P09601 288 aa3.94□□□□□ -1.78
SCARNA4.1-201ENST00000628597 CLCN6P51797 869 aa3.94□□□□□ -1.78
SCARNA4.1-201ENST00000628597 DEFB103AP81534 67 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms