RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 BTBD7Q9P203 1132 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 SRRDQ9UH36 339 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 FBXO40Q9UH90 709 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 ZNF214Q9UL59 606 aaPredicted RBP9.38□□□□□ -0.91
CHD2-213ENST00000628118 SLC12A7Q9Y666 1083 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 IVNS1ABPQ9Y6Y0 642 aa9.38□□□□□ -0.91
CHD2-213ENST00000628118 PALM3A6NDB9 673 aaPredicted RBP9.37□□□□□ -0.91
CHD2-213ENST00000628118 RPS6KB1P23443 525 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 FGD1P98174 961 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 TROAPQ12815 778 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 TMEM132BQ14DG7 1078 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 ADCK5Q3MIX3 580 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 POTEEQ6S8J3 1075 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 NFXL1Q6ZNB6 911 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 RUFY3Q7L099 469 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 CHST3Q7LGC8 479 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 GPR142Q7Z601 462 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 TRMT44Q8IYL2 757 aaKnown RBP9.37□□□□□ -0.91
CHD2-213ENST00000628118 ZNF654Q8IZM8 581 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 CHST13Q8NET6 341 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 CTCFLQ8NI51 663 aaPredicted RBP9.37□□□□□ -0.91
CHD2-213ENST00000628118 TRIM47Q96LD4 638 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 MOV10L1Q9BXT6 1211 aaKnown RBP9.37□□□□□ -0.91
CHD2-213ENST00000628118 AGXT2Q9BYV1 514 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 UPF2Q9HAU5 1272 aaKnown RBP9.37□□□□□ -0.91
CHD2-213ENST00000628118 ZSWIM6Q9HCJ5 1215 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 PLSCR2Q9NRY7 297 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 SLC5A4Q9NY91 659 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 PRR12Q9ULL5 1215 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 MTMR7Q9Y216 660 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 PTPN22Q9Y2R2 807 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 CYP46A1Q9Y6A2 500 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 DOCK3Q8IZD9 2030 aa9.37□□□□□ -0.91
CHD2-213ENST00000628118 FRMPD2Q68DX3 1309 aaPredicted RBP9.36□□□□□ -0.91
CHD2-213ENST00000628118 SLC15A5A6NIM6 579 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 ICAM1P05362 532 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 XRCC5P13010 732 aaKnown RBP9.36□□□□□ -0.91
CHD2-213ENST00000628118 ERCC3P19447 782 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 CASTP20810 708 aaKnown RBP9.36□□□□□ -0.91
CHD2-213ENST00000628118 PTPREP23469 700 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 RGS2P41220 211 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 PDAP1Q13442 181 aaKnown RBP9.36□□□□□ -0.91
CHD2-213ENST00000628118 PLS1Q14651 629 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 ASTLQ6HA08 431 aaPredicted RBP9.36□□□□□ -0.91
CHD2-213ENST00000628118 NBPF11Q86T75 865 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 NCAPG2Q86XI2 1143 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 SLAIN1Q8ND83 568 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 RAET1EQ8TD07 263 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 PXYLP1Q8TE99 480 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 ARHGAP39Q9C0H5 1083 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 PORCNQ9H237 461 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
CHD2-213ENST00000628118 BMP2KQ9NSY1 1161 aaPredicted RBP9.36□□□□□ -0.91
CHD2-213ENST00000628118 RBM28Q9NW13 759 aaKnown RBP9.36□□□□□ -0.91
CHD2-213ENST00000628118 COL11A1P12107 1806 aaPredicted RBP9.35□□□□□ -0.91
CHD2-213ENST00000628118 CCDC196A0A1B0GTZ2 297 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 KLRF2D3W0D1 207 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 HOXC6P09630 235 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 FCER1AP12319 257 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 CAPN2P17655 700 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 CTGFP29279 349 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 PSEN1P49768 467 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 FLT3LGP49771 235 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 EVCP57679 992 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 PRKCZQ05513 592 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 MAP2K5Q13163 448 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 GRB14Q14449 540 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 ANKRD1Q15327 319 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 MORN1Q5T089 497 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 COL13A1Q5TAT6 717 aaPredicted RBP9.35□□□□□ -0.91
CHD2-213ENST00000628118 SNRNP48Q6IEG0 339 aaKnown RBP9.35□□□□□ -0.91
CHD2-213ENST00000628118 TTBK2Q6IQ55 1244 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 Q6ZUG5 572 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 NUP133Q8WUM0 1156 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 MCOLN1Q9GZU1 580 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 ALDH8A1Q9H2A2 487 aaPredicted RBP9.35□□□□□ -0.91
CHD2-213ENST00000628118 RIOX1Q9H6W3 641 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 MAD2L2Q9UI95 211 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 GJD2Q9UKL4 321 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 DIS3Q9Y2L1 958 aaKnown RBP9.35□□□□□ -0.91
CHD2-213ENST00000628118 ZNF236Q9UL36 1845 aa9.35□□□□□ -0.91
CHD2-213ENST00000628118 ZNF536O15090 1300 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 TTLL13PA6NNM8 815 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 ZBTB43O43298 467 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 ATMINO43313 823 aaPredicted RBP9.34□□□□□ -0.91
CHD2-213ENST00000628118 GOLGA8HP0CJ92 632 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 SLC16A2P36021 539 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 RBM25P49756 843 aaKnown RBP9.34□□□□□ -0.91
CHD2-213ENST00000628118 KCTD2Q14681 263 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 WDR78Q5VTH9 848 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 APOA5Q6Q788 366 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 ADGRF4Q8IZF3 695 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 TNS4Q8IZW8 715 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 CPXCR1Q8N123 301 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 SAMD3Q8N6K7 520 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 FANCBQ8NB91 859 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 USP6NLQ92738 828 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 MTMR8Q96EF0 704 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 MMP19Q99542 508 aa9.34□□□□□ -0.91
CHD2-213ENST00000628118 APBA2Q99767 749 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms