RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 NEDD1Q8NHV4 660 aa16.06■□□□□ 0.16
TCF4-262ENST00000628078 COL25A1Q9BXS0 654 aaPredicted RBP16.06■□□□□ 0.16
TCF4-262ENST00000628078 NACAP1Q9BZK3 213 aa16.06■□□□□ 0.16
TCF4-262ENST00000628078 ZNF287Q9HBT7 754 aa16.06■□□□□ 0.16
TCF4-262ENST00000628078 LAMA2P24043 3122 aaKnown RBP16.05■□□□□ 0.16
TCF4-262ENST00000628078 SYNGAP1Q96PV0 1343 aa16.05■□□□□ 0.16
TCF4-262ENST00000628078 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.05■□□□□ 0.16
TCF4-262ENST00000628078 DCDC2CA8MYV0 355 aa16.05■□□□□ 0.16
TCF4-262ENST00000628078 KIAA0355O15063 1070 aa16.05■□□□□ 0.16
TCF4-262ENST00000628078 ASGR1P07306 291 aa16.05■□□□□ 0.16
TCF4-262ENST00000628078 FPGSQ05932 587 aa16.05■□□□□ 0.16
TCF4-262ENST00000628078 PDE4BQ07343 736 aa16.05■□□□□ 0.16
TCF4-262ENST00000628078 GNASQ5JWF2 1037 aa16.05■□□□□ 0.16
TCF4-262ENST00000628078 MAMDC4Q6UXC1 1216 aa16.05■□□□□ 0.16
TCF4-262ENST00000628078 NOL8Q76FK4 1167 aaKnown RBP16.05■□□□□ 0.16
TCF4-262ENST00000628078 ARMCX2Q7L311 632 aa16.05■□□□□ 0.16
TCF4-262ENST00000628078 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
TCF4-262ENST00000628078 TSEN34Q9BSV6 310 aaKnown RBP16.05■□□□□ 0.16
TCF4-262ENST00000628078 ATP2A1O14983 1001 aa16.04■□□□□ 0.16
TCF4-262ENST00000628078 DUSP11O75319 330 aaKnown RBP16.04■□□□□ 0.16
TCF4-262ENST00000628078 ALAS1P13196 640 aa16.04■□□□□ 0.16
TCF4-262ENST00000628078 ZMYM1Q5SVZ6 1142 aa16.04■□□□□ 0.16
TCF4-262ENST00000628078 CCSAPQ6IQ19 270 aaPredicted RBP16.04■□□□□ 0.16
TCF4-262ENST00000628078 EEPD1Q7L9B9 569 aa16.04■□□□□ 0.16
TCF4-262ENST00000628078 MSL3Q8N5Y2 521 aaKnown RBP16.04■□□□□ 0.16
TCF4-262ENST00000628078 GMCL1P1Q8NEA9 526 aa16.04■□□□□ 0.16
TCF4-262ENST00000628078 CHST13Q8NET6 341 aa16.04■□□□□ 0.16
TCF4-262ENST00000628078 PURBQ96QR8 312 aaKnown RBP16.04■□□□□ 0.16
TCF4-262ENST00000628078 STX8Q9UNK0 236 aa16.04■□□□□ 0.16
TCF4-262ENST00000628078 TTC41PQ6P2S7 1318 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 SOWAHBA6NEL2 793 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 TSPY2A6NKD2 308 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 ERC2O15083 957 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 FOXP2O15409 715 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 SLC3A2P08195 630 aaKnown RBP16.03■□□□□ 0.16
TCF4-262ENST00000628078 ACRP10323 421 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 SLC1A4P43007 532 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 SMAD3P84022 425 aaKnown RBP16.03■□□□□ 0.16
TCF4-262ENST00000628078 LRRFIP1Q32MZ4 808 aaKnown RBP16.03■□□□□ 0.16
TCF4-262ENST00000628078 TMEM63BQ5T3F8 832 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 VPS53Q5VIR6 699 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 ANKRD33Q7Z3H0 272 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 MAFAQ8NHW3 353 aaPredicted RBP16.03■□□□□ 0.16
TCF4-262ENST00000628078 GLT1D1Q96MS3 346 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 TRERF1Q96PN7 1200 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 PPP1R12CQ9BZL4 782 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 ABHD16BQ9H3Z7 469 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 IL17RBQ9NRM6 502 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 A0A0C4DFX4 3053 aa16.03■□□□□ 0.16
TCF4-262ENST00000628078 ZNF536O15090 1300 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 MOXD2PA6NHM9 499 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 GRXCR1A8MXD5 290 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 RANBP6O60518 1105 aaKnown RBP16.02■□□□□ 0.16
TCF4-262ENST00000628078 TIMP1P01033 207 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 MX1P20591 662 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 STAT2P52630 851 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 MUM1L1Q5H9M0 696 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 ANKRD45Q5TZF3 282 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 ZNF467Q7Z7K2 595 aaPredicted RBP16.02■□□□□ 0.16
TCF4-262ENST00000628078 STAG1Q8WVM7 1258 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.02■□□□□ 0.16
TCF4-262ENST00000628078 ACAD9Q9H845 621 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 SPC25Q9HBM1 224 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 A1CFQ9NQ94 594 aaKnown RBP16.02■□□□□ 0.16
TCF4-262ENST00000628078 PDGFCQ9NRA1 345 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 FBXO40Q9UH90 709 aa16.02■□□□□ 0.16
TCF4-262ENST00000628078 FOSL2P15408 326 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 SLC16A2P36021 539 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 CDK7P50613 346 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 GJA9P57773 515 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 TNFAIP2Q03169 654 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 RRP12Q5JTH9 1297 aaKnown RBP16.01■□□□□ 0.15
TCF4-262ENST00000628078 TTBK2Q6IQ55 1244 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 CXCL17Q6UXB2 119 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 C16orf59Q7L2K0 433 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 PCSK9Q8NBP7 692 aaKnown RBP16.01■□□□□ 0.15
TCF4-262ENST00000628078 CHURC1Q8WUH1 139 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 TOX2Q96NM4 488 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 KATNBL1Q9H079 304 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 TOMM22Q9NS69 142 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 PRR12Q9ULL5 1215 aa16.01■□□□□ 0.15
TCF4-262ENST00000628078 ARVCFO00192 962 aa16■□□□□ 0.15
TCF4-262ENST00000628078 CTAGE5O15320 804 aa16■□□□□ 0.15
TCF4-262ENST00000628078 DYNC1LI2O43237 492 aaPredicted RBP16■□□□□ 0.15
TCF4-262ENST00000628078 CSF2RAP15509 400 aa16■□□□□ 0.15
TCF4-262ENST00000628078 OAZ1P54368 228 aa16■□□□□ 0.15
TCF4-262ENST00000628078 GRIN2CQ14957 1233 aa16■□□□□ 0.15
TCF4-262ENST00000628078 CCDC96Q2M329 555 aa16■□□□□ 0.15
TCF4-262ENST00000628078 RCSD1Q6JBY9 416 aa16■□□□□ 0.15
TCF4-262ENST00000628078 NSMFQ6X4W1 530 aa16■□□□□ 0.15
TCF4-262ENST00000628078 FAM160B2Q86V87 743 aa16■□□□□ 0.15
TCF4-262ENST00000628078 FAM133AQ8N9E0 248 aa16■□□□□ 0.15
TCF4-262ENST00000628078 UPF3AQ9H1J1 476 aaKnown RBP16■□□□□ 0.15
TCF4-262ENST00000628078 TBX21Q9UL17 535 aa16■□□□□ 0.15
TCF4-262ENST00000628078 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16■□□□□ 0.15
TCF4-262ENST00000628078 ASTN1O14525 1302 aa15.99■□□□□ 0.15
TCF4-262ENST00000628078 ELP1O95163 1332 aa15.99■□□□□ 0.15
TCF4-262ENST00000628078 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.99■□□□□ 0.15
TCF4-262ENST00000628078 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms