RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 PABPC1P11940 636 aaKnown RBP3.69□□□□□ -1.82
SCN8A-210ENST00000627665 ITGA4P13612 1032 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 L1CAMP32004 1257 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 CAP2P40123 477 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 GUCY2FP51841 1108 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 NEK4P51957 841 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 GABREP78334 506 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 RBM10P98175 930 aaKnown RBP3.69□□□□□ -1.82
SCN8A-210ENST00000627665 IDI1Q13907 227 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 SART3Q15020 963 aaKnown RBP3.69□□□□□ -1.82
SCN8A-210ENST00000627665 GRIK5Q16478 980 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 RGL3Q3MIN7 710 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 ANKRD39Q53RE8 183 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 PPM1JQ5JR12 505 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 NOL9Q5SY16 702 aaKnown RBP3.69□□□□□ -1.82
SCN8A-210ENST00000627665 RNF219Q5W0B1 726 aaPredicted RBP3.69□□□□□ -1.82
SCN8A-210ENST00000627665 LRRTM3Q86VH5 581 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 DDX42Q86XP3 938 aaKnown RBP eCLIP3.69□□□□□ -1.82
SCN8A-210ENST00000627665 THNSL2Q86YJ6 484 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 NPAS3Q8IXF0 933 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 MFSD2AQ8NA29 543 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 BVESQ8NE79 360 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 RIN3Q8TB24 985 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 STAG1Q8WVM7 1258 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 KCTD13Q8WZ19 329 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 DDX17Q92841 729 aaKnown RBP3.69□□□□□ -1.82
SCN8A-210ENST00000627665 C8orf48Q96LL4 319 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 MAGEB10Q96LZ2 347 aaPredicted RBP3.69□□□□□ -1.82
SCN8A-210ENST00000627665 MDFIQ99750 246 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 IER2Q9BTL4 223 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 WDR18Q9BV38 432 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 YIPF2Q9BWQ6 316 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 RNF208Q9H0X6 261 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 PRDM6Q9NQX0 595 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 TJP2Q9UDY2 1190 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 KLF15Q9UIH9 416 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 AP4E1Q9UPM8 1137 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 EEA1Q15075 1411 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 CASKIN1Q8WXD9 1431 aa3.69□□□□□ -1.82
SCN8A-210ENST00000627665 A0A087WZG4 1122 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 A0A087X0B3 334 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 CCDC194A0A1B0GVG4 234 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 MEGF11A6BM72 1044 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 ECEL1O95672 775 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 CST3P01034 146 aaPredicted RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 ASLP04424 464 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 ITGAVP06756 1048 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 EPHX1P07099 455 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 CYP7A1P22680 504 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 ETV3P41162 512 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 PPP2R2AP63151 447 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 SRSF11Q05519 484 aaKnown RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 RING1Q06587 406 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 OS9Q13438 667 aaPredicted RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 HLTFQ14527 1009 aaKnown RBP eCLIP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 SETDB1Q15047 1291 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 BRDTQ58F21 947 aaPredicted RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 FAM209AQ5JX71 171 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 TRAPPC3LQ5T215 181 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 NBPF12Q5TAG4 269 aaPredicted RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 FDX2Q6P4F2 183 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 C20orf204Q6ZNR8 217 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 NECAB2Q7Z6G3 386 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 DMRTC2Q8IXT2 367 aaPredicted RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 C7orf61Q8IZ16 206 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 SLC16A10Q8TF71 515 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 EDARADDQ8WWZ3 215 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 DDX1Q92499 740 aaKnown RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 KISS1RQ969F8 398 aaPredicted RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 WDR89Q96FK6 387 aaPredicted RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 RCC1LQ96I51 464 aaKnown RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 FOXQ1Q9C009 403 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 ARHGEF4Q9NR80 690 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 LRRC4BQ9NT99 713 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 FAM86C1Q9NVL1 165 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 CRIM1Q9NZV1 1036 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 GMPR2Q9P2T1 348 aaKnown RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 FBXL21Q9UKT6 434 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 PCOLCE2Q9UKZ9 415 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 AKT3Q9Y243 479 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 DIS3Q9Y2L1 958 aaKnown RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 SF3B6Q9Y3B4 125 aaKnown RBP3.68□□□□□ -1.82
SCN8A-210ENST00000627665 STARD13Q9Y3M8 1113 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 DCCP43146 1447 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 ARHGAP31Q2M1Z3 1444 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 UNC13BO14795 1591 aa3.68□□□□□ -1.82
SCN8A-210ENST00000627665 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.67□□□□□ -1.82
SCN8A-210ENST00000627665 PIK3C2BO00750 1634 aa3.67□□□□□ -1.82
SCN8A-210ENST00000627665 MTUS2Q5JR59 1369 aa3.67□□□□□ -1.82
SCN8A-210ENST00000627665 PLEKHG1Q9ULL1 1385 aa3.67□□□□□ -1.82
SCN8A-210ENST00000627665 NINLQ9Y2I6 1382 aa3.67□□□□□ -1.82
SCN8A-210ENST00000627665 E2F8A0AVK6 867 aa3.67□□□□□ -1.82
SCN8A-210ENST00000627665 GOLGA6CA6NDK9 693 aa3.67□□□□□ -1.82
SCN8A-210ENST00000627665 GOLGA6BA6NDN3 693 aa3.67□□□□□ -1.82
SCN8A-210ENST00000627665 KCNQ2O43526 872 aa3.67□□□□□ -1.82
SCN8A-210ENST00000627665 OPA1O60313 960 aa3.67□□□□□ -1.82
SCN8A-210ENST00000627665 DNAJA2O60884 412 aa3.67□□□□□ -1.82
SCN8A-210ENST00000627665 ALDH1L1O75891 902 aa3.67□□□□□ -1.82
SCN8A-210ENST00000627665 RASGRP1O95267 797 aa3.67□□□□□ -1.82
SCN8A-210ENST00000627665 CPP00450 1065 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms