RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 SNRNP48Q6IEG0 339 aaKnown RBP14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 GALNT17Q6IS24 598 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 GBA2Q9HCG7 927 aaPredicted RBP14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 CLIC4Q9Y696 253 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 SCN7AQ01118 1682 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 NRDCO43847 1150 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 SORBS3O60504 671 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 GADD45BO75293 160 aaPredicted RBP14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 CALCRLQ16602 461 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 RBM46Q8TBY0 533 aaKnown RBP14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 OXER1Q8TDS5 423 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 TBCKQ8TEA7 893 aa14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 TAF1DQ9H5J8 278 aaPredicted RBP14.18□□□□□ -0.14
SCAMP1-207ENST00000621999 LY75O60449 1722 aa14.17□□□□□ -0.14
SCAMP1-207ENST00000621999 BACH1O14867 736 aa14.17□□□□□ -0.14
SCAMP1-207ENST00000621999 NEMFO60524 1076 aa14.17□□□□□ -0.14
SCAMP1-207ENST00000621999 WWC2Q6AWC2 1192 aa14.17□□□□□ -0.14
SCAMP1-207ENST00000621999 FOXP1Q9H334 677 aaPredicted RBP14.17□□□□□ -0.14
SCAMP1-207ENST00000621999 PPP2R3BQ9Y5P8 575 aa14.17□□□□□ -0.14
SCAMP1-207ENST00000621999 ANKRD20A12PQ8NF67 263 aa14.17□□□□□ -0.14
SCAMP1-207ENST00000621999 NMRK2Q9NPI5 230 aa14.17□□□□□ -0.14
SCAMP1-207ENST00000621999 PRR12Q9ULL5 1215 aa14.17□□□□□ -0.14
SCAMP1-207ENST00000621999 SPEF2Q9C093 1822 aa14.17□□□□□ -0.14
SCAMP1-207ENST00000621999 RRAGBQ5VZM2 374 aa14.17□□□□□ -0.14
SCAMP1-207ENST00000621999 LPAR1Q92633 364 aa14.17□□□□□ -0.14
SCAMP1-207ENST00000621999 C19orf81C9J6K1 198 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 CTDNEP1O95476 244 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 CCNA1P78396 465 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 COG2Q14746 738 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 PCMTD1Q96MG8 357 aaPredicted RBP14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 COL5A3P25940 1745 aaPredicted RBP14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 TRAF5O00463 557 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 PTGDRQ13258 359 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 KLHL40Q2TBA0 621 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 SH3BP5LQ7L8J4 393 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 GMLQ99445 158 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 PNMA3Q9UL41 463 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 WDR46O15213 610 aaKnown RBP14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 ZNF280AP59817 542 aaPredicted RBP14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 NCAPH2Q6IBW4 605 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 NAP1L4Q99733 375 aaKnown RBP14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 SLX4Q8IY92 1834 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 STIM1Q13586 685 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 DPP9Q86TI2 863 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 LRWD1Q9UFC0 647 aa14.16□□□□□ -0.14
SCAMP1-207ENST00000621999 FOSP01100 380 aaPredicted RBP14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 TPM2P07951 284 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 EIF2AK2P19525 551 aaKnown RBP14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 FASTKD5Q7L8L6 764 aaKnown RBP14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 EEPD1Q7L9B9 569 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 SPZ1Q9BXG8 430 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 MAD2L2Q9UI95 211 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 LDHDQ86WU2 507 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 ERO1BQ86YB8 467 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 TMEM260Q9NX78 707 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 PNMA2Q9UL42 364 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 FDPSP14324 419 aaKnown RBP14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 BACE1P56817 501 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 SNAPC2Q13487 334 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 NBPF11Q86T75 865 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 CLIC6Q96NY7 704 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 JMJD4Q9H9V9 463 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 RNF146Q9NTX7 359 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 BARHL2Q9NY43 387 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 TMX2Q9Y320 296 aa14.15□□□□□ -0.14
SCAMP1-207ENST00000621999 STK36Q9NRP7 1315 aa14.15□□□□□ -0.15
SCAMP1-207ENST00000621999 LIG1P18858 919 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 TECP42680 631 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 SGIP1Q9BQI5 828 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 CCL15-CCL14A0A0B4J2E2 113 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 POTEB2H3BUK9 544 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 STAT3P40763 770 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 CCL15Q16663 113 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 TRERF1Q96PN7 1200 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 hCG_1984214I3L0E3 225 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 YEATS4O95619 227 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 IBSPP21815 317 aaPredicted RBP14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 CCT6AP40227 531 aaKnown RBP14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 AMPD3Q01432 767 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 ZNF713Q8N859 430 aaPredicted RBP14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 SCLT1Q96NL6 688 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 DDX25Q9UHL0 483 aaKnown RBP14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 POLR2DO15514 142 aaKnown RBP14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 RESTQ13127 1097 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 RNF207Q6ZRF8 634 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 PLA2G4DQ86XP0 818 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 SMARCE1Q969G3 411 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 ATG4CQ96DT6 458 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 PCDHA12Q9UN75 941 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 PCDHB6Q9Y5E3 794 aa14.14□□□□□ -0.15
SCAMP1-207ENST00000621999 TAF1LQ8IZX4 1826 aa14.13□□□□□ -0.15
SCAMP1-207ENST00000621999 NPM3O75607 178 aaKnown RBP14.13□□□□□ -0.15
SCAMP1-207ENST00000621999 MTMR14Q8NCE2 650 aa14.13□□□□□ -0.15
SCAMP1-207ENST00000621999 OPTNQ96CV9 577 aa14.13□□□□□ -0.15
SCAMP1-207ENST00000621999 KCNH3Q9ULD8 1083 aa14.13□□□□□ -0.15
SCAMP1-207ENST00000621999 PALM3A6NDB9 673 aaPredicted RBP14.13□□□□□ -0.15
SCAMP1-207ENST00000621999 VGLL4Q14135 290 aa14.13□□□□□ -0.15
SCAMP1-207ENST00000621999 STAMQ92783 540 aa14.13□□□□□ -0.15
SCAMP1-207ENST00000621999 VTI1AQ96AJ9 217 aa14.13□□□□□ -0.15
SCAMP1-207ENST00000621999 AGXT2Q9BYV1 514 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms