RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 Q3C1V9 767 aa26.32■■□□□ 1.8
CBWD3-213ENST00000618217 CCDC82Q8N4S0 544 aa26.32■■□□□ 1.8
CBWD3-213ENST00000618217 ANKRD13CQ8N6S4 541 aa26.32■■□□□ 1.8
CBWD3-213ENST00000618217 CNTNAP5Q8WYK1 1306 aa26.31■■□□□ 1.8
CBWD3-213ENST00000618217 CTDNEP1O95476 244 aa26.3■■□□□ 1.8
CBWD3-213ENST00000618217 OAZ1P54368 228 aa26.3■■□□□ 1.8
CBWD3-213ENST00000618217 CDC37Q16543 378 aaPredicted RBP26.3■■□□□ 1.8
CBWD3-213ENST00000618217 FAM110CQ1W6H9 321 aa26.3■■□□□ 1.8
CBWD3-213ENST00000618217 PIGSQ96S52 555 aa26.3■■□□□ 1.8
CBWD3-213ENST00000618217 PAGR1Q9BTK6 254 aa26.3■■□□□ 1.8
CBWD3-213ENST00000618217 DHX16O60231 1041 aaKnown RBP26.29■■□□□ 1.8
CBWD3-213ENST00000618217 ERVK-9P63128 1117 aa26.29■■□□□ 1.8
CBWD3-213ENST00000618217 ERVK-24P63145 666 aa26.29■■□□□ 1.8
CBWD3-213ENST00000618217 GPRC5AQ8NFJ5 357 aa26.29■■□□□ 1.8
CBWD3-213ENST00000618217 ZBTB5O15062 677 aa26.28■■□□□ 1.8
CBWD3-213ENST00000618217 PPP1R11O60927 126 aaPredicted RBP26.28■■□□□ 1.8
CBWD3-213ENST00000618217 QRICH1Q2TAL8 776 aa26.28■■□□□ 1.8
CBWD3-213ENST00000618217 SPATC1LQ9H0A9 340 aa26.28■■□□□ 1.8
CBWD3-213ENST00000618217 RAVER2Q9HCJ3 691 aaKnown RBP26.28■■□□□ 1.8
CBWD3-213ENST00000618217 CCDC174Q6PII3 467 aa26.28■■□□□ 1.8
CBWD3-213ENST00000618217 CPXCR1Q8N123 301 aa26.28■■□□□ 1.8
CBWD3-213ENST00000618217 PHKBQ93100 1093 aa26.28■■□□□ 1.8
CBWD3-213ENST00000618217 RRP36Q96EU6 259 aaKnown RBP26.28■■□□□ 1.8
CBWD3-213ENST00000618217 AGBL1Q96MI9 1066 aa26.28■■□□□ 1.8
CBWD3-213ENST00000618217 BEGAINQ9BUH8 593 aa26.28■■□□□ 1.8
CBWD3-213ENST00000618217 V9GY48 417 aaPredicted RBP26.28■■□□□ 1.8
CBWD3-213ENST00000618217 PNMA6FA0A0J9YX94 578 aa26.27■■□□□ 1.8
CBWD3-213ENST00000618217 CPLX1O14810 134 aa26.27■■□□□ 1.8
CBWD3-213ENST00000618217 ICAM1P05362 532 aa26.27■■□□□ 1.8
CBWD3-213ENST00000618217 STAT3P40763 770 aa26.27■■□□□ 1.8
CBWD3-213ENST00000618217 NOM1Q5C9Z4 860 aaKnown RBP26.27■■□□□ 1.8
CBWD3-213ENST00000618217 CCDC83Q8IWF9 413 aa26.27■■□□□ 1.8
CBWD3-213ENST00000618217 TEX13BQ9BXU2 312 aa26.27■■□□□ 1.8
CBWD3-213ENST00000618217 RBM19Q9Y4C8 960 aaKnown RBP26.27■■□□□ 1.8
CBWD3-213ENST00000618217 hCG_1642624A0A1W2PR95 340 aa26.26■■□□□ 1.79
CBWD3-213ENST00000618217 PRPF3O43395 683 aaKnown RBP26.26■■□□□ 1.79
CBWD3-213ENST00000618217 HOMER1Q86YM7 354 aa26.26■■□□□ 1.79
CBWD3-213ENST00000618217 PIBF1Q8WXW3 757 aa26.26■■□□□ 1.79
CBWD3-213ENST00000618217 MOV10L1Q9BXT6 1211 aaKnown RBP26.26■■□□□ 1.79
CBWD3-213ENST00000618217 RIPK3Q9Y572 518 aa26.26■■□□□ 1.79
CBWD3-213ENST00000618217 PPFIA3O75145 1194 aa26.25■■□□□ 1.79
CBWD3-213ENST00000618217 RIOX2Q8IUF8 465 aa26.25■■□□□ 1.79
CBWD3-213ENST00000618217 NSUN7Q8NE18 718 aaKnown RBP26.25■■□□□ 1.79
CBWD3-213ENST00000618217 RNF26Q9BY78 433 aaPredicted RBP26.25■■□□□ 1.79
CBWD3-213ENST00000618217 CTDP1Q9Y5B0 961 aaPredicted RBP26.25■■□□□ 1.79
CBWD3-213ENST00000618217 DTNBO60941 627 aa26.25■■□□□ 1.79
CBWD3-213ENST00000618217 FMNL1O95466 1100 aaPredicted RBP26.25■■□□□ 1.79
CBWD3-213ENST00000618217 PLS1Q14651 629 aa26.25■■□□□ 1.79
CBWD3-213ENST00000618217 PKN1Q16512 942 aa26.25■■□□□ 1.79
CBWD3-213ENST00000618217 SNRNP48Q6IEG0 339 aaKnown RBP26.25■■□□□ 1.79
CBWD3-213ENST00000618217 CPLX2Q6PUV4 134 aaKnown RBP26.25■■□□□ 1.79
CBWD3-213ENST00000618217 GPR25O00155 361 aa26.24■■□□□ 1.79
CBWD3-213ENST00000618217 CDKL5O76039 1030 aa26.24■■□□□ 1.79
CBWD3-213ENST00000618217 TAL1P17542 331 aaPredicted RBP26.24■■□□□ 1.79
CBWD3-213ENST00000618217 SLC26A6Q9BXS9 759 aa26.24■■□□□ 1.79
CBWD3-213ENST00000618217 PORCNQ9H237 461 aa26.24■■□□□ 1.79
CBWD3-213ENST00000618217 CCPG1Q9ULG6 757 aa26.24■■□□□ 1.79
CBWD3-213ENST00000618217 K7ELQ4 463 aaPredicted RBP26.23■■□□□ 1.79
CBWD3-213ENST00000618217 SSRP1Q08945 709 aaKnown RBP26.23■■□□□ 1.79
CBWD3-213ENST00000618217 CUL4AQ13619 759 aa26.23■■□□□ 1.79
CBWD3-213ENST00000618217 FBXO11Q86XK2 927 aa26.23■■□□□ 1.79
CBWD3-213ENST00000618217 SHCBP1Q8NEM2 672 aa26.23■■□□□ 1.79
CBWD3-213ENST00000618217 LLPHQ9BRT6 129 aaKnown RBP26.23■■□□□ 1.79
CBWD3-213ENST00000618217 AMNQ9BXJ7 453 aa26.23■■□□□ 1.79
CBWD3-213ENST00000618217 TSKSQ9UJT2 592 aa26.23■■□□□ 1.79
CBWD3-213ENST00000618217 PNMA2Q9UL42 364 aa26.23■■□□□ 1.79
CBWD3-213ENST00000618217 MGAMO43451 1857 aa26.23■■□□□ 1.79
CBWD3-213ENST00000618217 CCNA1P78396 465 aa26.22■■□□□ 1.79
CBWD3-213ENST00000618217 RBM27Q9P2N5 1060 aaKnown RBP26.22■■□□□ 1.79
CBWD3-213ENST00000618217 SEC63Q9UGP8 760 aaKnown RBP26.22■■□□□ 1.79
CBWD3-213ENST00000618217 DOCK3Q8IZD9 2030 aa26.22■■□□□ 1.79
CBWD3-213ENST00000618217 JAK2O60674 1132 aa26.21■■□□□ 1.79
CBWD3-213ENST00000618217 SLC25A27O95847 323 aa26.21■■□□□ 1.79
CBWD3-213ENST00000618217 FDPSP14324 419 aaKnown RBP26.21■■□□□ 1.79
CBWD3-213ENST00000618217 SP3Q02447 781 aa26.21■■□□□ 1.79
CBWD3-213ENST00000618217 PFKFB3Q16875 520 aaPredicted RBP26.21■■□□□ 1.79
CBWD3-213ENST00000618217 TRIM22Q8IYM9 498 aa26.21■■□□□ 1.79
CBWD3-213ENST00000618217 SMARCC2Q8TAQ2 1214 aa26.21■■□□□ 1.79
CBWD3-213ENST00000618217 PCDHA1Q9Y5I3 950 aa26.21■■□□□ 1.79
CBWD3-213ENST00000618217 STK36Q9NRP7 1315 aa26.21■■□□□ 1.79
CBWD3-213ENST00000618217 PTPDC1A2A3K4 754 aa26.21■■□□□ 1.79
CBWD3-213ENST00000618217 ERCC3P19447 782 aa26.21■■□□□ 1.79
CBWD3-213ENST00000618217 EFCC1Q9HA90 598 aa26.21■■□□□ 1.79
CBWD3-213ENST00000618217 ZSWIM8A7E2V4 1837 aa26.2■■□□□ 1.79
CBWD3-213ENST00000618217 SCG2P13521 617 aa26.2■■□□□ 1.78
CBWD3-213ENST00000618217 CTGFP29279 349 aa26.2■■□□□ 1.78
CBWD3-213ENST00000618217 LACTBP83111 547 aaPredicted RBP26.2■■□□□ 1.78
CBWD3-213ENST00000618217 CAP1Q01518 475 aa26.2■■□□□ 1.78
CBWD3-213ENST00000618217 TKFCQ3LXA3 575 aa26.2■■□□□ 1.78
CBWD3-213ENST00000618217 USH1GQ495M9 461 aa26.2■■□□□ 1.78
CBWD3-213ENST00000618217 HSCBQ8IWL3 235 aa26.2■■□□□ 1.78
CBWD3-213ENST00000618217 MROH8Q9H579 483 aa26.2■■□□□ 1.78
CBWD3-213ENST00000618217 DEXIO95424 95 aa26.19■■□□□ 1.78
CBWD3-213ENST00000618217 ALAS1P13196 640 aa26.19■■□□□ 1.78
CBWD3-213ENST00000618217 COPB2P35606 906 aa26.19■■□□□ 1.78
CBWD3-213ENST00000618217 WWC2Q6AWC2 1192 aa26.19■■□□□ 1.78
CBWD3-213ENST00000618217 CLEC4DQ8WXI8 215 aa26.19■■□□□ 1.78
CBWD3-213ENST00000618217 COA7Q96BR5 231 aa26.19■■□□□ 1.78
CBWD3-213ENST00000618217 TRERF1Q96PN7 1200 aa26.19■■□□□ 1.78
CBWD3-213ENST00000618217 ZNFX1Q9P2E3 1918 aaKnown RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms