RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ST3GAL1Q11201 340 aa18.11■□□□□ 0.49
PCDHGC3-204ENST00000617222 PLS1Q14651 629 aa18.11■□□□□ 0.49
PCDHGC3-204ENST00000617222 JMYQ8N9B5 988 aa18.11■□□□□ 0.49
PCDHGC3-204ENST00000617222 GPRC5AQ8NFJ5 357 aa18.11■□□□□ 0.49
PCDHGC3-204ENST00000617222 MTMR8Q96EF0 704 aa18.11■□□□□ 0.49
PCDHGC3-204ENST00000617222 RRP36Q96EU6 259 aaKnown RBP18.11■□□□□ 0.49
PCDHGC3-204ENST00000617222 CFHR5Q9BXR6 569 aa18.11■□□□□ 0.49
PCDHGC3-204ENST00000617222 SAGE1Q9NXZ1 904 aa18.11■□□□□ 0.49
PCDHGC3-204ENST00000617222 THSD7BQ9C0I4 1608 aa18.1■□□□□ 0.49
PCDHGC3-204ENST00000617222 CNTNAP5Q8WYK1 1306 aa18.1■□□□□ 0.49
PCDHGC3-204ENST00000617222 ZBTB5O15062 677 aa18.1■□□□□ 0.49
PCDHGC3-204ENST00000617222 DTNBO60941 627 aa18.1■□□□□ 0.49
PCDHGC3-204ENST00000617222 IFNAR1P17181 557 aa18.1■□□□□ 0.49
PCDHGC3-204ENST00000617222 STAT3P40763 770 aa18.1■□□□□ 0.49
PCDHGC3-204ENST00000617222 ERVK-9P63128 1117 aa18.1■□□□□ 0.49
PCDHGC3-204ENST00000617222 ERVK-24P63145 666 aa18.1■□□□□ 0.49
PCDHGC3-204ENST00000617222 QRICH1Q2TAL8 776 aa18.1■□□□□ 0.49
PCDHGC3-204ENST00000617222 PHKBQ93100 1093 aa18.1■□□□□ 0.49
PCDHGC3-204ENST00000617222 AGBL1Q96MI9 1066 aa18.1■□□□□ 0.49
PCDHGC3-204ENST00000617222 MORF4L1Q9UBU8 362 aa18.1■□□□□ 0.49
PCDHGC3-204ENST00000617222 ZNF536O15090 1300 aa18.09■□□□□ 0.49
PCDHGC3-204ENST00000617222 PNMA6FA0A0J9YX94 578 aa18.09■□□□□ 0.49
PCDHGC3-204ENST00000617222 CTDNEP1O95476 244 aa18.09■□□□□ 0.49
PCDHGC3-204ENST00000617222 SSRP1Q08945 709 aaKnown RBP18.09■□□□□ 0.49
PCDHGC3-204ENST00000617222 FAM110CQ1W6H9 321 aa18.09■□□□□ 0.49
PCDHGC3-204ENST00000617222 HSCBQ8IWL3 235 aa18.09■□□□□ 0.49
PCDHGC3-204ENST00000617222 SLC26A6Q9BXS9 759 aa18.09■□□□□ 0.49
PCDHGC3-204ENST00000617222 SPATC1LQ9H0A9 340 aa18.09■□□□□ 0.49
PCDHGC3-204ENST00000617222 SEC63Q9UGP8 760 aaKnown RBP18.09■□□□□ 0.49
PCDHGC3-204ENST00000617222 TSKSQ9UJT2 592 aa18.09■□□□□ 0.49
PCDHGC3-204ENST00000617222 ZNF214Q9UL59 606 aaPredicted RBP18.09■□□□□ 0.49
PCDHGC3-204ENST00000617222 ATP2A1O14983 1001 aa18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 PRPF3O43395 683 aaKnown RBP18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 CDKL5O76039 1030 aa18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 ICAM1P05362 532 aa18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 TAL1P17542 331 aaPredicted RBP18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 OAZ1P54368 228 aa18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 AKAP17AQ02040 695 aaKnown RBP18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 SNRNP48Q6IEG0 339 aaKnown RBP18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 FBXO11Q86XK2 927 aa18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 MOV10L1Q9BXT6 1211 aaKnown RBP18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 TEX13BQ9BXU2 312 aa18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 CCPG1Q9ULG6 757 aa18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 RIPK3Q9Y572 518 aa18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 RLFQ13129 1914 aa18.08■□□□□ 0.48
PCDHGC3-204ENST00000617222 K7ELQ4 463 aaPredicted RBP18.07■□□□□ 0.48
PCDHGC3-204ENST00000617222 GPR25O00155 361 aa18.07■□□□□ 0.48
PCDHGC3-204ENST00000617222 PPP1R11O60927 126 aaPredicted RBP18.07■□□□□ 0.48
PCDHGC3-204ENST00000617222 ECM2O94769 699 aaPredicted RBP18.07■□□□□ 0.48
PCDHGC3-204ENST00000617222 FMNL1O95466 1100 aaPredicted RBP18.07■□□□□ 0.48
PCDHGC3-204ENST00000617222 CCNA1P78396 465 aa18.07■□□□□ 0.48
PCDHGC3-204ENST00000617222 USH1GQ495M9 461 aa18.07■□□□□ 0.48
PCDHGC3-204ENST00000617222 RIOX2Q8IUF8 465 aa18.07■□□□□ 0.48
PCDHGC3-204ENST00000617222 TRIM22Q8IYM9 498 aa18.07■□□□□ 0.48
PCDHGC3-204ENST00000617222 NSUN7Q8NE18 718 aaKnown RBP18.07■□□□□ 0.48
PCDHGC3-204ENST00000617222 AMNQ9BXJ7 453 aa18.07■□□□□ 0.48
PCDHGC3-204ENST00000617222 RNF26Q9BY78 433 aaPredicted RBP18.07■□□□□ 0.48
PCDHGC3-204ENST00000617222 BAZ2BQ9UIF8 2168 aaKnown RBP18.06■□□□□ 0.48
PCDHGC3-204ENST00000617222 JAK2O60674 1132 aa18.06■□□□□ 0.48
PCDHGC3-204ENST00000617222 ALAS1P13196 640 aa18.06■□□□□ 0.48
PCDHGC3-204ENST00000617222 NCAPG2Q86XI2 1143 aa18.06■□□□□ 0.48
PCDHGC3-204ENST00000617222 CCAR1Q8IX12 1150 aaKnown RBP18.06■□□□□ 0.48
PCDHGC3-204ENST00000617222 PORCNQ9H237 461 aa18.06■□□□□ 0.48
PCDHGC3-204ENST00000617222 PNMA2Q9UL42 364 aa18.06■□□□□ 0.48
PCDHGC3-204ENST00000617222 PTPDC1A2A3K4 754 aa18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 SLC25A27O95847 323 aa18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 ERCC3P19447 782 aa18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 SP3Q02447 781 aa18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 PKN1Q16512 942 aa18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 WDR78Q5VTH9 848 aa18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 COA7Q96BR5 231 aa18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 DDX11Q96FC9 970 aa18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 TRERF1Q96PN7 1200 aa18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 LLPHQ9BRT6 129 aaKnown RBP18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 EFCC1Q9HA90 598 aa18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 HOMER2Q9NSB8 354 aa18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 RBM27Q9P2N5 1060 aaKnown RBP18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 ORC3Q9UBD5 711 aaPredicted RBP18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 PCDHA1Q9Y5I3 950 aa18.05■□□□□ 0.48
PCDHGC3-204ENST00000617222 DEXIO95424 95 aa18.04■□□□□ 0.48
PCDHGC3-204ENST00000617222 SCG2P13521 617 aa18.04■□□□□ 0.48
PCDHGC3-204ENST00000617222 CUL4AQ13619 759 aa18.04■□□□□ 0.48
PCDHGC3-204ENST00000617222 PFKFB3Q16875 520 aaPredicted RBP18.04■□□□□ 0.48
PCDHGC3-204ENST00000617222 TKFCQ3LXA3 575 aa18.04■□□□□ 0.48
PCDHGC3-204ENST00000617222 HEATR3Q7Z4Q2 680 aa18.04■□□□□ 0.48
PCDHGC3-204ENST00000617222 SHCBP1Q8NEM2 672 aa18.04■□□□□ 0.48
PCDHGC3-204ENST00000617222 GPKOWQ92917 476 aaPredicted RBP eCLIP18.04■□□□□ 0.48
PCDHGC3-204ENST00000617222 TSHZ2Q9NRE2 1034 aa18.04■□□□□ 0.48
PCDHGC3-204ENST00000617222 RNF146Q9NTX7 359 aa18.04■□□□□ 0.48
PCDHGC3-204ENST00000617222 FKTNO75072 461 aa18.03■□□□□ 0.48
PCDHGC3-204ENST00000617222 HSPA1AP0DMV8 641 aaKnown RBP18.03■□□□□ 0.48
PCDHGC3-204ENST00000617222 HSPA1BP0DMV9 641 aaKnown RBP18.03■□□□□ 0.48
PCDHGC3-204ENST00000617222 FDPSP14324 419 aaKnown RBP18.03■□□□□ 0.48
PCDHGC3-204ENST00000617222 COPB2P35606 906 aa18.03■□□□□ 0.48
PCDHGC3-204ENST00000617222 TRAF1Q13077 416 aa18.03■□□□□ 0.48
PCDHGC3-204ENST00000617222 MUM1L1Q5H9M0 696 aa18.03■□□□□ 0.48
PCDHGC3-204ENST00000617222 WWC2Q6AWC2 1192 aa18.03■□□□□ 0.48
PCDHGC3-204ENST00000617222 CHST13Q8NET6 341 aa18.03■□□□□ 0.48
PCDHGC3-204ENST00000617222 SMARCC2Q8TAQ2 1214 aa18.03■□□□□ 0.48
PCDHGC3-204ENST00000617222 MROH8Q9H579 483 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms