RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 NLRP10Q86W26 655 aa17.17■□□□□ 0.34
NOP56-220ENST00000616692 TTC30BQ8N4P2 665 aa17.17■□□□□ 0.34
NOP56-220ENST00000616692 TMEM87AQ8NBN3 555 aa17.17■□□□□ 0.34
NOP56-220ENST00000616692 ZCWPW1Q9H0M4 648 aa17.17■□□□□ 0.34
NOP56-220ENST00000616692 EPC1Q9H2F5 836 aa17.17■□□□□ 0.34
NOP56-220ENST00000616692 PHF24Q9UPV7 400 aa17.17■□□□□ 0.34
NOP56-220ENST00000616692 DDX60Q8IY21 1712 aaKnown RBP17.17■□□□□ 0.34
NOP56-220ENST00000616692 ZNF609O15014 1411 aa17.17■□□□□ 0.34
NOP56-220ENST00000616692 SHOX2O60902 331 aaPredicted RBP17.16■□□□□ 0.34
NOP56-220ENST00000616692 SEPT14Q6ZU15 432 aa17.16■□□□□ 0.34
NOP56-220ENST00000616692 C3orf67Q6ZVT6 689 aa17.16■□□□□ 0.34
NOP56-220ENST00000616692 CARD6Q9BX69 1037 aa17.16■□□□□ 0.34
NOP56-220ENST00000616692 PHLPP2Q6ZVD8 1323 aa17.16■□□□□ 0.34
NOP56-220ENST00000616692 SH3TC1Q8TE82 1336 aa17.16■□□□□ 0.34
NOP56-220ENST00000616692 PDHBP11177 359 aa17.16■□□□□ 0.34
NOP56-220ENST00000616692 RPS12P25398 132 aaKnown RBP17.16■□□□□ 0.34
NOP56-220ENST00000616692 ARHGAP25P42331 645 aa17.16■□□□□ 0.34
NOP56-220ENST00000616692 AOC3Q16853 763 aa17.16■□□□□ 0.34
NOP56-220ENST00000616692 ANKRD13BQ86YJ7 626 aa17.16■□□□□ 0.34
NOP56-220ENST00000616692 CCDC47Q96A33 483 aaKnown RBP17.16■□□□□ 0.34
NOP56-220ENST00000616692 TPX2Q9ULW0 747 aaKnown RBP17.16■□□□□ 0.34
NOP56-220ENST00000616692 ABL1P00519 1130 aa17.15■□□□□ 0.34
NOP56-220ENST00000616692 PARP1P09874 1014 aaKnown RBP17.15■□□□□ 0.34
NOP56-220ENST00000616692 GMPSP49915 693 aaPredicted RBP17.15■□□□□ 0.34
NOP56-220ENST00000616692 CCZ1BP86790 482 aa17.15■□□□□ 0.34
NOP56-220ENST00000616692 CCZ1P86791 482 aaPredicted RBP17.15■□□□□ 0.34
NOP56-220ENST00000616692 SMUG1Q53HV7 270 aa17.15■□□□□ 0.34
NOP56-220ENST00000616692 MYO1AQ9UBC5 1043 aa17.15■□□□□ 0.34
NOP56-220ENST00000616692 GOLGA6L9A6NEM1 432 aa17.15■□□□□ 0.34
NOP56-220ENST00000616692 ZSCAN12O43309 604 aa17.15■□□□□ 0.34
NOP56-220ENST00000616692 LINGO3P0C6S8 592 aa17.15■□□□□ 0.34
NOP56-220ENST00000616692 KRT72Q14CN4 511 aa17.15■□□□□ 0.34
NOP56-220ENST00000616692 OTUD6AQ7L8S5 288 aa17.15■□□□□ 0.34
NOP56-220ENST00000616692 HNRNPLLQ8WVV9 542 aaKnown RBP17.15■□□□□ 0.34
NOP56-220ENST00000616692 ALOX15P16050 662 aaPredicted RBP17.14■□□□□ 0.34
NOP56-220ENST00000616692 ZWILCHQ9H900 591 aa17.14■□□□□ 0.34
NOP56-220ENST00000616692 MKS1Q9NXB0 559 aa17.14■□□□□ 0.34
NOP56-220ENST00000616692 SF3B3Q15393 1217 aaKnown RBP17.14■□□□□ 0.33
NOP56-220ENST00000616692 GNPTABQ3T906 1256 aa17.14■□□□□ 0.33
NOP56-220ENST00000616692 FAM228AQ86W67 206 aa17.14■□□□□ 0.33
NOP56-220ENST00000616692 DZIP1Q86YF9 867 aaKnown RBP17.14■□□□□ 0.33
NOP56-220ENST00000616692 WHAMMQ8TF30 809 aa17.14■□□□□ 0.33
NOP56-220ENST00000616692 RSPH1Q8WYR4 309 aa17.14■□□□□ 0.33
NOP56-220ENST00000616692 RABGGTAQ92696 567 aa17.14■□□□□ 0.33
NOP56-220ENST00000616692 VCPKMTQ9H867 229 aa17.14■□□□□ 0.33
NOP56-220ENST00000616692 GDPD2Q9HCC8 539 aa17.14■□□□□ 0.33
NOP56-220ENST00000616692 PEX14O75381 377 aa17.14■□□□□ 0.33
NOP56-220ENST00000616692 SLC40A1Q9NP59 571 aa17.14■□□□□ 0.33
NOP56-220ENST00000616692 H7C1D1 291 aa17.13■□□□□ 0.33
NOP56-220ENST00000616692 CLCN2P51788 898 aa17.13■□□□□ 0.33
NOP56-220ENST00000616692 TRIM28Q13263 835 aaKnown RBP17.13■□□□□ 0.33
NOP56-220ENST00000616692 SPATS2Q86XZ4 545 aaKnown RBP17.13■□□□□ 0.33
NOP56-220ENST00000616692 REM2Q8IYK8 340 aaPredicted RBP17.13■□□□□ 0.33
NOP56-220ENST00000616692 CLIP3Q96DZ5 547 aa17.13■□□□□ 0.33
NOP56-220ENST00000616692 CENPOQ9BU64 300 aa17.13■□□□□ 0.33
NOP56-220ENST00000616692 SAGE1Q9NXZ1 904 aa17.13■□□□□ 0.33
NOP56-220ENST00000616692 AATFQ9NY61 560 aaKnown RBP eCLIP17.13■□□□□ 0.331e-39■■■■■ 32.3
NOP56-220ENST00000616692 CHL1O00533 1208 aa17.13■□□□□ 0.33
NOP56-220ENST00000616692 GUCY1B3Q02153 619 aa17.13■□□□□ 0.33
NOP56-220ENST00000616692 GNL2Q13823 731 aaKnown RBP17.13■□□□□ 0.33
NOP56-220ENST00000616692 CYP4F22Q6NT55 531 aa17.13■□□□□ 0.33
NOP56-220ENST00000616692 USP33Q8TEY7 942 aa17.13■□□□□ 0.33
NOP56-220ENST00000616692 PPP1R13BQ96KQ4 1090 aa17.13■□□□□ 0.33
NOP56-220ENST00000616692 BCL2L13Q9BXK5 485 aa17.13■□□□□ 0.33
NOP56-220ENST00000616692 SPO11Q9Y5K1 396 aa17.13■□□□□ 0.33
NOP56-220ENST00000616692 BZW2Q9Y6E2 419 aaKnown RBP17.13■□□□□ 0.33
NOP56-220ENST00000616692 CELF2O95319 508 aaKnown RBP17.12■□□□□ 0.33
NOP56-220ENST00000616692 SLC34A2O95436 690 aa17.12■□□□□ 0.33
NOP56-220ENST00000616692 NOGQ13253 232 aa17.12■□□□□ 0.33
NOP56-220ENST00000616692 BMP2KLQ5H9B9 411 aa17.12■□□□□ 0.33
NOP56-220ENST00000616692 PLBD2Q8NHP8 589 aa17.12■□□□□ 0.33
NOP56-220ENST00000616692 FAM76AQ8TAV0 307 aa17.12■□□□□ 0.33
NOP56-220ENST00000616692 CTNNBL1Q8WYA6 563 aaPredicted RBP17.12■□□□□ 0.33
NOP56-220ENST00000616692 MPHOSPH6Q99547 160 aaKnown RBP17.12■□□□□ 0.33
NOP56-220ENST00000616692 DUOX1Q9NRD9 1551 aa17.12■□□□□ 0.33
NOP56-220ENST00000616692 MEFVO15553 781 aaPredicted RBP17.12■□□□□ 0.33
NOP56-220ENST00000616692 TRIM21P19474 475 aaKnown RBP17.12■□□□□ 0.33
NOP56-220ENST00000616692 TMPOP42166 694 aaKnown RBP17.12■□□□□ 0.33
NOP56-220ENST00000616692 SLMAPQ14BN4 828 aa17.12■□□□□ 0.33
NOP56-220ENST00000616692 B4GALNT4Q76KP1 1039 aa17.12■□□□□ 0.33
NOP56-220ENST00000616692 RSRC2Q7L4I2 434 aaKnown RBP17.12■□□□□ 0.33
NOP56-220ENST00000616692 COPS6Q7L5N1 327 aa17.12■□□□□ 0.33
NOP56-220ENST00000616692 GBP7Q8N8V2 638 aaPredicted RBP17.12■□□□□ 0.33
NOP56-220ENST00000616692 EYA3Q99504 573 aa17.12■□□□□ 0.33
NOP56-220ENST00000616692 TRMT112Q9UI30 125 aaKnown RBP17.12■□□□□ 0.33
NOP56-220ENST00000616692 CCDC69A6NI79 296 aa17.11■□□□□ 0.33
NOP56-220ENST00000616692 ST18O60284 1047 aa17.11■□□□□ 0.33
NOP56-220ENST00000616692 SMIM24O75264 130 aa17.11■□□□□ 0.33
NOP56-220ENST00000616692 DYNC1I2Q13409 638 aaKnown RBP17.11■□□□□ 0.33
NOP56-220ENST00000616692 BEND6Q5SZJ8 279 aaPredicted RBP17.11■□□□□ 0.33
NOP56-220ENST00000616692 LUZP1Q86V48 1076 aa17.11■□□□□ 0.33
NOP56-220ENST00000616692 XAGE3Q8WTP9 111 aa17.11■□□□□ 0.33
NOP56-220ENST00000616692 CCDC85AQ96PX6 553 aaPredicted RBP17.11■□□□□ 0.33
NOP56-220ENST00000616692 ISCA1Q9BUE6 129 aa17.11■□□□□ 0.33
NOP56-220ENST00000616692 SWAP70Q9UH65 585 aa17.11■□□□□ 0.33
NOP56-220ENST00000616692 TRAF5O00463 557 aa17.11■□□□□ 0.33
NOP56-220ENST00000616692 ZFXP17010 805 aaPredicted RBP17.11■□□□□ 0.33
NOP56-220ENST00000616692 UBE2HP62256 183 aa17.11■□□□□ 0.33
NOP56-220ENST00000616692 ARID5BQ14865 1188 aa17.11■□□□□ 0.33
NOP56-220ENST00000616692 UBE2OQ9C0C9 1292 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms