RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 SSRP1Q08945 709 aaKnown RBP9.11□□□□□ -0.95
MALAT1-208ENST00000616527 RTN1Q16799 776 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 DGKHQ86XP1 1220 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 AMOTL1Q8IY63 956 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 TRIM22Q8IYM9 498 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 ZNF654Q8IZM8 581 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 FANCBQ8NB91 859 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 PPP1R9BQ96SB3 815 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 EYA3Q99504 573 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 RTFDC1Q9BY42 306 aaPredicted RBP9.11□□□□□ -0.95
MALAT1-208ENST00000616527 RNF26Q9BY78 433 aaPredicted RBP9.11□□□□□ -0.95
MALAT1-208ENST00000616527 TMX4Q9H1E5 349 aaPredicted RBP9.11□□□□□ -0.95
MALAT1-208ENST00000616527 AATFQ9NY61 560 aaKnown RBP eCLIP9.11□□□□□ -0.95
MALAT1-208ENST00000616527 NAP1L2Q9ULW6 460 aaPredicted RBP9.11□□□□□ -0.95
MALAT1-208ENST00000616527 PCDHB11Q9Y5F2 797 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 LTBP1Q14766 1721 aa9.11□□□□□ -0.95
MALAT1-208ENST00000616527 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.1□□□□□ -0.95
MALAT1-208ENST00000616527 GOLGA6L4A6NEF3 574 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 MINDY4BA8MYZ0 360 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 CTAGE5O15320 804 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 DEXIO95424 95 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 CAVIN2O95810 425 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 KIF23Q02241 960 aaPredicted RBP9.1□□□□□ -0.95
MALAT1-208ENST00000616527 SLC15A2Q16348 729 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 PODNQ7Z5L7 613 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 NBPF11Q86T75 865 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 CRACR2BQ8N4Y2 399 aaPredicted RBP9.1□□□□□ -0.95
MALAT1-208ENST00000616527 CCDC155Q8N6L0 562 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 ENAHQ8N8S7 591 aaPredicted RBP9.1□□□□□ -0.95
MALAT1-208ENST00000616527 KCNG4Q8TDN1 519 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 ANP32BQ92688 251 aaKnown RBP9.1□□□□□ -0.95
MALAT1-208ENST00000616527 ALG1Q9BT22 464 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 FUCA2Q9BTY2 467 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 TSPY26PQ9H489 355 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 STK17AQ9UEE5 414 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 RGS17Q9UGC6 210 aaPredicted RBP9.1□□□□□ -0.95
MALAT1-208ENST00000616527 TAF1P21675 1872 aa9.1□□□□□ -0.95
MALAT1-208ENST00000616527 TNKSO95271 1327 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 SYCE3A1L190 88 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 SLC35F4A4IF30 521 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 PALM3A6NDB9 673 aaPredicted RBP9.09□□□□□ -0.95
MALAT1-208ENST00000616527 PRPF3O43395 683 aaKnown RBP9.09□□□□□ -0.95
MALAT1-208ENST00000616527 RANBP6O60518 1105 aaKnown RBP9.09□□□□□ -0.95
MALAT1-208ENST00000616527 SOX11P35716 441 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 NOVP48745 357 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 RNF144AP50876 292 aaPredicted RBP9.09□□□□□ -0.95
MALAT1-208ENST00000616527 HDLBPQ00341 1268 aaKnown RBP9.09□□□□□ -0.95
MALAT1-208ENST00000616527 CCDC173Q0VFZ6 552 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 TROAPQ12815 778 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 SEMA3FQ13275 785 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 FOXD4L6Q3SYB3 417 aaPredicted RBP9.09□□□□□ -0.95
MALAT1-208ENST00000616527 HS1BP3Q53T59 392 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 MFSD14BQ5SR56 506 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 KRT40Q6A162 431 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 ADALQ6DHV7 355 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 HHIPL2Q6UWX4 724 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 FOXD4L3Q6VB84 417 aaPredicted RBP9.09□□□□□ -0.95
MALAT1-208ENST00000616527 CATIPQ7Z7H3 387 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 MICU3Q86XE3 530 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 LINC00301Q8NCQ3 95 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 CNKSR1Q969H4 720 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 PGBD1Q96JS3 809 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 ZC3H12CQ9C0D7 883 aaKnown RBP9.09□□□□□ -0.95
MALAT1-208ENST00000616527 FOXP1Q9H334 677 aaPredicted RBP9.09□□□□□ -0.95
MALAT1-208ENST00000616527 INCENPQ9NQS7 918 aa9.09□□□□□ -0.95
MALAT1-208ENST00000616527 TFIP11Q9UBB9 837 aaKnown RBP9.09□□□□□ -0.95
MALAT1-208ENST00000616527 MYO3BQ8WXR4 1341 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 FAM237AA0A1B0GTK4 181 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 H0YIN7 160 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 PPP6R2O75170 966 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 XBP1P17861 261 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 USP5P45974 858 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 SCTRP47872 440 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 GNAQP50148 359 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 RHBDL3P58872 404 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 TRIM29Q14134 588 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 RRP12Q5JTH9 1297 aaKnown RBP9.08□□□□□ -0.96
MALAT1-208ENST00000616527 IFIT1BQ5T764 474 aaKnown RBP9.08□□□□□ -0.96
MALAT1-208ENST00000616527 FAM173BQ6P4H8 233 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 DPP8Q6V1X1 898 aaPredicted RBP9.08□□□□□ -0.96
MALAT1-208ENST00000616527 JMYQ8N9B5 988 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 PDLIM2Q96JY6 352 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 USP28Q96RU2 1077 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 RBSNQ9H1K0 784 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 CLSTN2Q9H4D0 955 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 TOMM22Q9NS69 142 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 MCM9Q9NXL9 1143 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 STK32BQ9NY57 414 aa9.08□□□□□ -0.96
MALAT1-208ENST00000616527 TNS1Q9HBL0 1735 aaKnown RBP9.08□□□□□ -0.96
MALAT1-208ENST00000616527 C10orf71Q711Q0 1435 aa9.07□□□□□ -0.96
MALAT1-208ENST00000616527 A0A1W2PRU2 124 aa9.07□□□□□ -0.96
MALAT1-208ENST00000616527 MMP1P03956 469 aa9.07□□□□□ -0.96
MALAT1-208ENST00000616527 CCDC192P0DO97 292 aa9.07□□□□□ -0.96
MALAT1-208ENST00000616527 SMARCA1P28370 1054 aa9.07□□□□□ -0.96
MALAT1-208ENST00000616527 KIF5BP33176 963 aa9.07□□□□□ -0.96
MALAT1-208ENST00000616527 BTDP43251 543 aa9.07□□□□□ -0.96
MALAT1-208ENST00000616527 SLC39A14Q15043 492 aa9.07□□□□□ -0.96
MALAT1-208ENST00000616527 SAFBQ15424 915 aaKnown RBP eCLIP9.07□□□□□ -0.961e-323■□□□□ 8.2
MALAT1-208ENST00000616527 MAP3K11Q16584 847 aa9.07□□□□□ -0.96
MALAT1-208ENST00000616527 ANO1Q5XXA6 986 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms