RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 DDX25Q9UHL0 483 aaKnown RBP13.8□□□□□ -0.2
TCF4-248ENST00000616053 BRPF3Q9ULD4 1205 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 TTF2Q9UNY4 1162 aaKnown RBP13.8□□□□□ -0.2
TCF4-248ENST00000616053 WDR17Q8IZU2 1322 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 EFCAB8A8MWE9 144 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 GTF2A1P52655 376 aaPredicted RBP13.8□□□□□ -0.2
TCF4-248ENST00000616053 TBC1D8BQ0IIM8 1120 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 OTUB1Q96FW1 271 aaPredicted RBP13.8□□□□□ -0.2
TCF4-248ENST00000616053 GDPD2Q9HCC8 539 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 CNOT7Q9UIV1 285 aaKnown RBP13.8□□□□□ -0.2
TCF4-248ENST00000616053 H0YC42 278 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 INO80B-WBP1J3KQ70 363 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 ZSCAN9O15535 394 aaPredicted RBP13.8□□□□□ -0.2
TCF4-248ENST00000616053 C7orf31Q8N865 590 aa13.8□□□□□ -0.2
TCF4-248ENST00000616053 INO80BQ9C086 356 aaPredicted RBP13.8□□□□□ -0.2
TCF4-248ENST00000616053 RXRAP19793 462 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 RRM2BQ7LG56 351 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 SKAP1Q86WV1 359 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 CDCA7LQ96GN5 454 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 NUDCD1Q96RS6 583 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 TSHZ2Q9NRE2 1034 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 KCNA1Q09470 495 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 CCDC24Q8N4L8 307 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 INPP5FQ9Y2H2 1132 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 MRPL11Q9Y3B7 192 aaKnown RBP13.79□□□□□ -0.2
TCF4-248ENST00000616053 PDE1BQ01064 536 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 GRIN1Q05586 938 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 TAB3Q8N5C8 712 aaPredicted RBP13.79□□□□□ -0.2
TCF4-248ENST00000616053 JPH2Q9BR39 696 aaPredicted RBP13.79□□□□□ -0.2
TCF4-248ENST00000616053 MAP3K13O43283 966 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 OPHN1O60890 802 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 ARIH2O95376 493 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 BAG2O95816 211 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 CYP2J2P51589 502 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 PNMA3Q9UL41 463 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 EIF3CLB5ME19 914 aaKnown RBP13.79□□□□□ -0.2
TCF4-248ENST00000616053 NFX1Q12986 1120 aaKnown RBP13.79□□□□□ -0.2
TCF4-248ENST00000616053 MFSD4BQ5TF39 518 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 MAP7D3Q8IWC1 876 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 SIX6OS1Q8N1H7 587 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 KDRP35968 1356 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 CHEK2O96017 543 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 CENPAP49450 140 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 GDAP1L1Q96MZ0 367 aa13.79□□□□□ -0.2
TCF4-248ENST00000616053 CHCHD3Q9NX63 227 aaKnown RBP13.79□□□□□ -0.2
TCF4-248ENST00000616053 STX18Q9P2W9 335 aaKnown RBP13.79□□□□□ -0.2
TCF4-248ENST00000616053 SPTLC2O15270 562 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 MYL1P05976 194 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 SLC9C1Q4G0N8 1177 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 SYCE1Q8N0S2 351 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 EPS15L1Q9UBC2 864 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 SEPT9Q9UHD8 586 aaPredicted RBP13.78□□□□□ -0.2
TCF4-248ENST00000616053 PAXBP1Q9Y5B6 917 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 SERPINB6P35237 376 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 FAM76AQ8TAV0 307 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 BUB1BO60566 1050 aaPredicted RBP13.78□□□□□ -0.2
TCF4-248ENST00000616053 CAPN2P17655 700 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 OCRLQ01968 901 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 MGARPQ8TDB4 240 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 ASMTLO95671 621 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 STX19Q8N4C7 294 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 RTL1A6NKG5 1358 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 RNF10Q8N5U6 811 aaKnown RBP13.78□□□□□ -0.2
TCF4-248ENST00000616053 TJAP1Q5JTD0 557 aa13.78□□□□□ -0.2
TCF4-248ENST00000616053 L3MBTL3Q96JM7 780 aaPredicted RBP13.78□□□□□ -0.2
TCF4-248ENST00000616053 ADCY5O95622 1261 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 BEND3Q5T5X7 828 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 PDXDC1Q6P996 788 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 AOPEPQ8N6M6 819 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 ASIC4Q96FT7 647 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 NACADO15069 1562 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 MBD4O95243 580 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 POLR2MP0CAP2 368 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 GNAT1P11488 350 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 NSUN2Q08J23 767 aaKnown RBP eCLIP13.77□□□□□ -0.2
TCF4-248ENST00000616053 PIK3AP1Q6ZUJ8 805 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 TBC1D22AQ8WUA7 517 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 CACTINQ8WUQ7 758 aaKnown RBP13.77□□□□□ -0.2
TCF4-248ENST00000616053 SERPIND1P05546 499 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 GTF2IP78347 998 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 HABP4Q5JVS0 413 aaKnown RBP13.77□□□□□ -0.2
TCF4-248ENST00000616053 CAPN12Q6ZSI9 719 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 CROCCP2Q86T23 111 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 GBP5Q96PP8 586 aa13.77□□□□□ -0.2
TCF4-248ENST00000616053 ATF5Q9Y2D1 282 aaPredicted RBP13.77□□□□□ -0.2
TCF4-248ENST00000616053 ACTN1P12814 892 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 FLOT2Q14254 428 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 C8orf74Q6P047 294 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 ATG3Q9NT62 314 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 IFT122Q9HBG6 1241 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 TTC21BQ7Z4L5 1316 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 CCDC88BA6NC98 1476 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 PLEKHH2Q8IVE3 1493 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 K7ENM7 598 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 KRT7P08729 469 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 RASSF2P50749 326 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 SPATS2LQ9NUQ6 558 aaKnown RBP13.77□□□□□ -0.21
TCF4-248ENST00000616053 CHPF2Q9P2E5 772 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 HSPA6P17066 643 aa13.77□□□□□ -0.21
TCF4-248ENST00000616053 NELFCDQ8IXH7 590 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms