RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 MYCNP04198 464 aaPredicted RBP26.8■■□□□ 1.88
FAM228B-208ENST00000613899 ZNF865P0CJ78 1059 aaPredicted RBP26.8■■□□□ 1.88
FAM228B-208ENST00000613899 NT5C2P49902 561 aa26.8■■□□□ 1.88
FAM228B-208ENST00000613899 ATN1P54259 1190 aaPredicted RBP26.8■■□□□ 1.88
FAM228B-208ENST00000613899 LRRC41Q15345 812 aa26.8■■□□□ 1.88
FAM228B-208ENST00000613899 TBC1D10CQ8IV04 446 aa26.8■■□□□ 1.88
FAM228B-208ENST00000613899 XPNPEP3Q9NQH7 507 aa26.8■■□□□ 1.88
FAM228B-208ENST00000613899 ZNF536O15090 1300 aa26.8■■□□□ 1.88
FAM228B-208ENST00000613899 TAL1P17542 331 aaPredicted RBP26.79■■□□□ 1.88
FAM228B-208ENST00000613899 MAGEA10P43363 369 aaPredicted RBP26.79■■□□□ 1.88
FAM228B-208ENST00000613899 RASGRP2Q7LDG7 609 aa26.79■■□□□ 1.88
FAM228B-208ENST00000613899 TMEM47Q9BQJ4 181 aa26.79■■□□□ 1.88
FAM228B-208ENST00000613899 RNF146Q9NTX7 359 aa26.79■■□□□ 1.88
FAM228B-208ENST00000613899 PRR12Q9ULL5 1215 aa26.79■■□□□ 1.88
FAM228B-208ENST00000613899 ZNF213O14771 459 aa26.78■■□□□ 1.88
FAM228B-208ENST00000613899 RNF180Q86T96 592 aa26.78■■□□□ 1.88
FAM228B-208ENST00000613899 ESR2Q92731 530 aa26.78■■□□□ 1.88
FAM228B-208ENST00000613899 AGBL1Q96MI9 1066 aa26.78■■□□□ 1.88
FAM228B-208ENST00000613899 MCM3APO60318 1980 aa26.78■■□□□ 1.88
FAM228B-208ENST00000613899 SNAI1O95863 264 aaPredicted RBP26.77■■□□□ 1.88
FAM228B-208ENST00000613899 RTP1P59025 263 aa26.77■■□□□ 1.88
FAM228B-208ENST00000613899 CCDC174Q6PII3 467 aa26.77■■□□□ 1.88
FAM228B-208ENST00000613899 TTC14Q96N46 770 aa26.77■■□□□ 1.88
FAM228B-208ENST00000613899 DSCC1Q9BVC3 393 aa26.77■■□□□ 1.88
FAM228B-208ENST00000613899 ZHX1Q9UKY1 873 aaPredicted RBP26.77■■□□□ 1.88
FAM228B-208ENST00000613899 DNAH12Q6ZR08 3092 aa26.77■■□□□ 1.88
FAM228B-208ENST00000613899 NEDD4P46934 1319 aa26.76■■□□□ 1.87
FAM228B-208ENST00000613899 ALAS1P13196 640 aa26.76■■□□□ 1.87
FAM228B-208ENST00000613899 TRERF1Q96PN7 1200 aa26.76■■□□□ 1.87
FAM228B-208ENST00000613899 A1CFQ9NQ94 594 aaKnown RBP26.76■■□□□ 1.87
FAM228B-208ENST00000613899 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.76■■□□□ 1.87
FAM228B-208ENST00000613899 FAM184BQ9ULE4 1060 aa26.76■■□□□ 1.87
FAM228B-208ENST00000613899 POTEB2H3BUK9 544 aa26.75■■□□□ 1.87
FAM228B-208ENST00000613899 BTNL9Q6UXG8 535 aa26.75■■□□□ 1.87
FAM228B-208ENST00000613899 SLC39A5Q6ZMH5 540 aa26.75■■□□□ 1.87
FAM228B-208ENST00000613899 FGD4Q96M96 766 aa26.75■■□□□ 1.87
FAM228B-208ENST00000613899 ABHD16BQ9H3Z7 469 aa26.75■■□□□ 1.87
FAM228B-208ENST00000613899 PRKAG2Q9UGJ0 569 aa26.75■■□□□ 1.87
FAM228B-208ENST00000613899 PGK1P00558 417 aa26.74■■□□□ 1.87
FAM228B-208ENST00000613899 PDE4AP27815 886 aa26.74■■□□□ 1.87
FAM228B-208ENST00000613899 ADCYAP1R1P41586 468 aa26.74■■□□□ 1.87
FAM228B-208ENST00000613899 IRX6P78412 446 aaPredicted RBP26.74■■□□□ 1.87
FAM228B-208ENST00000613899 SNX17Q15036 470 aa26.74■■□□□ 1.87
FAM228B-208ENST00000613899 TTC22Q5TAA0 569 aa26.74■■□□□ 1.87
FAM228B-208ENST00000613899 SYDE2Q5VT97 1194 aa26.74■■□□□ 1.87
FAM228B-208ENST00000613899 ARMCX2Q7L311 632 aa26.74■■□□□ 1.87
FAM228B-208ENST00000613899 RANBP17Q9H2T7 1088 aaKnown RBP26.74■■□□□ 1.87
FAM228B-208ENST00000613899 CCPG1Q9ULG6 757 aa26.74■■□□□ 1.87
FAM228B-208ENST00000613899 PHF24Q9UPV7 400 aa26.74■■□□□ 1.87
FAM228B-208ENST00000613899 ATP11BQ9Y2G3 1177 aa26.74■■□□□ 1.87
FAM228B-208ENST00000613899 ICAM1P05362 532 aa26.73■■□□□ 1.87
FAM228B-208ENST00000613899 PDHBP11177 359 aa26.73■■□□□ 1.87
FAM228B-208ENST00000613899 ACVR2BQ13705 512 aa26.73■■□□□ 1.87
FAM228B-208ENST00000613899 IMMTQ16891 758 aaKnown RBP26.73■■□□□ 1.87
FAM228B-208ENST00000613899 CCDC178Q5BJE1 867 aa26.73■■□□□ 1.87
FAM228B-208ENST00000613899 FAM133AQ8N9E0 248 aa26.73■■□□□ 1.87
FAM228B-208ENST00000613899 LENG1Q96BZ8 264 aaPredicted RBP26.73■■□□□ 1.87
FAM228B-208ENST00000613899 UBE2OQ9C0C9 1292 aaKnown RBP26.73■■□□□ 1.87
FAM228B-208ENST00000613899 CTNNA3Q9UI47 895 aa26.73■■□□□ 1.87
FAM228B-208ENST00000613899 FRMPD2Q68DX3 1309 aaPredicted RBP26.72■■□□□ 1.87
FAM228B-208ENST00000613899 SYNRGQ9UMZ2 1314 aa26.72■■□□□ 1.87
FAM228B-208ENST00000613899 SLC16A2P36021 539 aa26.72■■□□□ 1.87
FAM228B-208ENST00000613899 SNAP25P60880 206 aa26.72■■□□□ 1.87
FAM228B-208ENST00000613899 CNTN2Q02246 1040 aa26.72■■□□□ 1.87
FAM228B-208ENST00000613899 C1orf53Q5VUE5 145 aa26.72■■□□□ 1.87
FAM228B-208ENST00000613899 TTBK2Q6IQ55 1244 aa26.72■■□□□ 1.87
FAM228B-208ENST00000613899 IQCA1Q86XH1 822 aa26.72■■□□□ 1.87
FAM228B-208ENST00000613899 TDHQ8IZJ6 230 aa26.72■■□□□ 1.87
FAM228B-208ENST00000613899 FERMT2Q96AC1 680 aa26.72■■□□□ 1.87
FAM228B-208ENST00000613899 RAD50Q92878 1312 aa26.71■■□□□ 1.87
FAM228B-208ENST00000613899 ADAMTS4O75173 837 aa26.71■■□□□ 1.87
FAM228B-208ENST00000613899 GSPT1P15170 499 aaKnown RBP26.71■■□□□ 1.87
FAM228B-208ENST00000613899 DGKHQ86XP1 1220 aa26.71■■□□□ 1.87
FAM228B-208ENST00000613899 CCDC144CPQ8IYA2 1237 aa26.71■■□□□ 1.87
FAM228B-208ENST00000613899 LBHD1Q9BQE6 289 aaPredicted RBP26.71■■□□□ 1.87
FAM228B-208ENST00000613899 TSEN34Q9BSV6 310 aaKnown RBP26.71■■□□□ 1.87
FAM228B-208ENST00000613899 GPCPD1Q9NPB8 672 aa26.71■■□□□ 1.87
FAM228B-208ENST00000613899 PNMA2Q9UL42 364 aa26.71■■□□□ 1.87
FAM228B-208ENST00000613899 LTBP2Q14767 1821 aa26.71■■□□□ 1.87
FAM228B-208ENST00000613899 LRRC37A2A6NM11 1700 aa26.7■■□□□ 1.87
FAM228B-208ENST00000613899 ASB14A6NK59 587 aa26.7■■□□□ 1.86
FAM228B-208ENST00000613899 KDM4AO75164 1064 aa26.7■■□□□ 1.86
FAM228B-208ENST00000613899 DUSP11O75319 330 aaKnown RBP26.7■■□□□ 1.86
FAM228B-208ENST00000613899 SNHG28P0DPA3 235 aa26.7■■□□□ 1.86
FAM228B-208ENST00000613899 ZNF543Q08ER8 600 aa26.7■■□□□ 1.86
FAM228B-208ENST00000613899 MUM1L1Q5H9M0 696 aa26.7■■□□□ 1.86
FAM228B-208ENST00000613899 A0A1W2PQ45 241 aaPredicted RBP26.69■■□□□ 1.86
FAM228B-208ENST00000613899 A0A1W2PQY0 241 aa26.69■■□□□ 1.86
FAM228B-208ENST00000613899 MDM2Q00987 491 aaPredicted RBP26.69■■□□□ 1.86
FAM228B-208ENST00000613899 TRIM60Q495X7 471 aa26.69■■□□□ 1.86
FAM228B-208ENST00000613899 GPATCH4Q5T3I0 446 aaKnown RBP26.69■■□□□ 1.86
FAM228B-208ENST00000613899 ZKSCAN3Q9BRR0 538 aa26.69■■□□□ 1.86
FAM228B-208ENST00000613899 CYP39A1Q9NYL5 469 aa26.69■■□□□ 1.86
FAM228B-208ENST00000613899 LCTP09848 1927 aa26.69■■□□□ 1.86
FAM228B-208ENST00000613899 LAMA3Q16787 3333 aa26.68■■□□□ 1.86
FAM228B-208ENST00000613899 CCDC144BQ3MJ40 725 aa26.68■■□□□ 1.86
FAM228B-208ENST00000613899 NSMFQ6X4W1 530 aa26.68■■□□□ 1.86
FAM228B-208ENST00000613899 KRT23Q9C075 422 aa26.68■■□□□ 1.86
FAM228B-208ENST00000613899 CNNM2Q9H8M5 875 aa26.68■■□□□ 1.86
FAM228B-208ENST00000613899 SPC25Q9HBM1 224 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms