RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ALAS1P13196 640 aa14.44□□□□□ -0.1
CBWD3-208ENST00000612050 CCND3P30281 292 aaPredicted RBP14.44□□□□□ -0.1
CBWD3-208ENST00000612050 RNF20Q5VTR2 975 aa14.44□□□□□ -0.1
CBWD3-208ENST00000612050 NBPF3Q9H094 633 aa14.44□□□□□ -0.1
CBWD3-208ENST00000612050 ZSWIM5Q9P217 1185 aa14.44□□□□□ -0.1
CBWD3-208ENST00000612050 DDX20Q9UHI6 824 aaKnown RBP14.44□□□□□ -0.1
CBWD3-208ENST00000612050 PFASO15067 1338 aa14.44□□□□□ -0.1
CBWD3-208ENST00000612050 TNKSO95271 1327 aa14.44□□□□□ -0.1
CBWD3-208ENST00000612050 FRMPD2Q68DX3 1309 aaPredicted RBP14.44□□□□□ -0.1
CBWD3-208ENST00000612050 COBLO75128 1261 aa14.43□□□□□ -0.1
CBWD3-208ENST00000612050 PGK2P07205 417 aa14.43□□□□□ -0.1
CBWD3-208ENST00000612050 PDHBP11177 359 aa14.43□□□□□ -0.1
CBWD3-208ENST00000612050 ASPRV1Q53RT3 343 aa14.43□□□□□ -0.1
CBWD3-208ENST00000612050 ARRDC4Q8NCT1 418 aa14.43□□□□□ -0.1
CBWD3-208ENST00000612050 TRERF1Q96PN7 1200 aa14.43□□□□□ -0.1
CBWD3-208ENST00000612050 MPHOSPH6Q99547 160 aaKnown RBP14.43□□□□□ -0.1
CBWD3-208ENST00000612050 TINF2Q9BSI4 451 aa14.43□□□□□ -0.1
CBWD3-208ENST00000612050 ANO2Q9NQ90 1003 aa14.43□□□□□ -0.1
CBWD3-208ENST00000612050 RNF146Q9NTX7 359 aa14.43□□□□□ -0.1
CBWD3-208ENST00000612050 FLRT1Q9NZU1 646 aa14.43□□□□□ -0.1
CBWD3-208ENST00000612050 OGDHLQ9ULD0 1010 aa14.43□□□□□ -0.1
CBWD3-208ENST00000612050 TACC3Q9Y6A5 838 aa14.43□□□□□ -0.1
CBWD3-208ENST00000612050 POTEB2H3BUK9 544 aa14.42□□□□□ -0.1
CBWD3-208ENST00000612050 SEPT4O43236 478 aa14.42□□□□□ -0.1
CBWD3-208ENST00000612050 CDC45O75419 566 aa14.42□□□□□ -0.1
CBWD3-208ENST00000612050 ICAM1P05362 532 aa14.42□□□□□ -0.1
CBWD3-208ENST00000612050 PARP1P09874 1014 aaKnown RBP14.42□□□□□ -0.1
CBWD3-208ENST00000612050 PTH1RQ03431 593 aa14.42□□□□□ -0.1
CBWD3-208ENST00000612050 ZNF543Q08ER8 600 aa14.42□□□□□ -0.1
CBWD3-208ENST00000612050 BTNL9Q6UXG8 535 aa14.42□□□□□ -0.1
CBWD3-208ENST00000612050 PAWRQ96IZ0 340 aaKnown RBP14.42□□□□□ -0.1
CBWD3-208ENST00000612050 ESYT1Q9BSJ8 1104 aa14.42□□□□□ -0.1
CBWD3-208ENST00000612050 C11orf49Q9H6J7 331 aa14.42□□□□□ -0.1
CBWD3-208ENST00000612050 RIPK3Q9Y572 518 aa14.42□□□□□ -0.1
CBWD3-208ENST00000612050 KBTBD13C9JR72 458 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 IFIT3O14879 490 aaKnown RBP14.41□□□□□ -0.1
CBWD3-208ENST00000612050 EVI5O60447 810 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 CYP21A2P08686 494 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 CYBAP13498 195 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 SLC16A2P36021 539 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 ZNF792Q3KQV3 632 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 ERICH6BQ5W0A0 696 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 ZNF467Q7Z7K2 595 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-208ENST00000612050 ENAHQ8N8S7 591 aaPredicted RBP14.41□□□□□ -0.1
CBWD3-208ENST00000612050 ANKS1AQ92625 1134 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 MAP4K1Q92918 833 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 RANBP17Q9H2T7 1088 aaKnown RBP14.41□□□□□ -0.1
CBWD3-208ENST00000612050 RBM8AQ9Y5S9 174 aaKnown RBP14.41□□□□□ -0.1
CBWD3-208ENST00000612050 SYNGAP1Q96PV0 1343 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 B4DLN1 442 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 E7EWF7 191 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 RARBP10826 455 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 MRPL12P52815 198 aaKnown RBP14.41□□□□□ -0.1
CBWD3-208ENST00000612050 TRAF1Q13077 416 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 WTAPQ15007 396 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.41□□□□□ -0.1
CBWD3-208ENST00000612050 AGBL1Q96MI9 1066 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 IL25Q9H293 177 aa14.41□□□□□ -0.1
CBWD3-208ENST00000612050 ADD3Q9UEY8 706 aaKnown RBP14.41□□□□□ -0.1
CBWD3-208ENST00000612050 CENPFP49454 3210 aa14.4□□□□□ -0.1
CBWD3-208ENST00000612050 ASB14A6NK59 587 aa14.4□□□□□ -0.1
CBWD3-208ENST00000612050 SNHG28P0DPA3 235 aa14.4□□□□□ -0.1
CBWD3-208ENST00000612050 AKR1A1P14550 325 aa14.4□□□□□ -0.1
CBWD3-208ENST00000612050 TTBK2Q6IQ55 1244 aa14.4□□□□□ -0.1
CBWD3-208ENST00000612050 NSMFQ6X4W1 530 aa14.4□□□□□ -0.1
CBWD3-208ENST00000612050 SPC25Q9HBM1 224 aa14.4□□□□□ -0.1
CBWD3-208ENST00000612050 FRMPD3Q5JV73 1810 aa14.39□□□□□ -0.11
CBWD3-208ENST00000612050 DNAJC25-GNG10A0A024R161 153 aa14.39□□□□□ -0.11
CBWD3-208ENST00000612050 DNM1LO00429 736 aa14.39□□□□□ -0.11
CBWD3-208ENST00000612050 TMEM67Q5HYA8 995 aa14.39□□□□□ -0.11
CBWD3-208ENST00000612050 CATIPQ7Z7H3 387 aa14.39□□□□□ -0.11
CBWD3-208ENST00000612050 RNF180Q86T96 592 aa14.39□□□□□ -0.11
CBWD3-208ENST00000612050 TMTC2Q8N394 836 aa14.39□□□□□ -0.11
CBWD3-208ENST00000612050 ABHD16BQ9H3Z7 469 aa14.39□□□□□ -0.11
CBWD3-208ENST00000612050 ZHX1Q9UKY1 873 aaPredicted RBP14.39□□□□□ -0.11
CBWD3-208ENST00000612050 FAM184BQ9ULE4 1060 aa14.39□□□□□ -0.11
CBWD3-208ENST00000612050 WDR19Q8NEZ3 1342 aa14.39□□□□□ -0.11
CBWD3-208ENST00000612050 PTPDC1A2A3K4 754 aa14.38□□□□□ -0.11
CBWD3-208ENST00000612050 GOLGA8HP0CJ92 632 aa14.38□□□□□ -0.11
CBWD3-208ENST00000612050 MCM5P33992 734 aa14.38□□□□□ -0.11
CBWD3-208ENST00000612050 SNAP25P60880 206 aa14.38□□□□□ -0.11
CBWD3-208ENST00000612050 LHX8Q68G74 356 aa14.38□□□□□ -0.11
CBWD3-208ENST00000612050 MAMDC4Q6UXC1 1216 aa14.38□□□□□ -0.11
CBWD3-208ENST00000612050 NFXL1Q6ZNB6 911 aa14.38□□□□□ -0.11
CBWD3-208ENST00000612050 RASGRP2Q7LDG7 609 aa14.38□□□□□ -0.11
CBWD3-208ENST00000612050 UBE2Q1Q7Z7E8 422 aa14.38□□□□□ -0.11
CBWD3-208ENST00000612050 MTA3Q9BTC8 594 aa14.38□□□□□ -0.11
CBWD3-208ENST00000612050 A1CFQ9NQ94 594 aaKnown RBP14.38□□□□□ -0.11
CBWD3-208ENST00000612050 PPP4R2Q9NY27 417 aa14.38□□□□□ -0.11
CBWD3-208ENST00000612050 ZNF536O15090 1300 aa14.38□□□□□ -0.11
CBWD3-208ENST00000612050 PDE4DIPQ5VU43 2346 aa14.37□□□□□ -0.11
CBWD3-208ENST00000612050 PRAMEF19Q5SWL8 479 aa14.37□□□□□ -0.11
CBWD3-208ENST00000612050 MCF2L2Q86YR7 1114 aa14.37□□□□□ -0.11
CBWD3-208ENST00000612050 TMEM87BQ96K49 555 aa14.37□□□□□ -0.11
CBWD3-208ENST00000612050 MAF1Q9H063 256 aa14.37□□□□□ -0.11
CBWD3-208ENST00000612050 XPNPEP3Q9NQH7 507 aa14.37□□□□□ -0.11
CBWD3-208ENST00000612050 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.37□□□□□ -0.11
CBWD3-208ENST00000612050 MYH6P13533 1939 aa14.37□□□□□ -0.11
CBWD3-208ENST00000612050 ABCB11O95342 1321 aa14.36□□□□□ -0.11
CBWD3-208ENST00000612050 LOC102724159A0A0B4J2E5 919 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms