RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 SSC5DA1L4H1 1573 aa14.07□□□□□ -0.16
CBWD1-220ENST00000612045 GOLGA6L3A6NEY3 463 aa14.07□□□□□ -0.16
CBWD1-220ENST00000612045 LETM1O95202 739 aaPredicted RBP14.07□□□□□ -0.16
CBWD1-220ENST00000612045 CMA1P23946 247 aa14.07□□□□□ -0.16
CBWD1-220ENST00000612045 STAT2P52630 851 aa14.07□□□□□ -0.16
CBWD1-220ENST00000612045 FAM160A1Q05DH4 1040 aa14.07□□□□□ -0.16
CBWD1-220ENST00000612045 SNW1Q13573 536 aaKnown RBP14.07□□□□□ -0.16
CBWD1-220ENST00000612045 USP50Q70EL3 339 aaPredicted RBP14.07□□□□□ -0.16
CBWD1-220ENST00000612045 GAS2L3Q86XJ1 694 aa14.07□□□□□ -0.16
CBWD1-220ENST00000612045 SCYL3Q8IZE3 742 aa14.07□□□□□ -0.16
CBWD1-220ENST00000612045 KRI1Q8N9T8 703 aaKnown RBP14.07□□□□□ -0.16
CBWD1-220ENST00000612045 ENGASEQ8NFI3 743 aa14.07□□□□□ -0.16
CBWD1-220ENST00000612045 FEZ1Q99689 392 aa14.07□□□□□ -0.16
CBWD1-220ENST00000612045 FZD1Q9UP38 647 aa14.07□□□□□ -0.16
CBWD1-220ENST00000612045 MORC2Q9Y6X9 1032 aaPredicted RBP14.07□□□□□ -0.16
CBWD1-220ENST00000612045 A0A1B0GVL5 298 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 GLTPD2A6NH11 291 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 CUTAO60888 179 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 BMP15O95972 392 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 ADCY7P51828 1080 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 ZNF174Q15697 407 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 LRSAM1Q6UWE0 723 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 KRT25Q7Z3Z0 450 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 REXO1Q8N1G1 1221 aaKnown RBP14.06□□□□□ -0.16
CBWD1-220ENST00000612045 ZKSCAN4Q969J2 545 aaPredicted RBP14.06□□□□□ -0.16
CBWD1-220ENST00000612045 KLRG1Q96E93 195 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 CLIC6Q96NY7 704 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 NUP62CLQ9H1M0 184 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 RIC8AQ9NPQ8 531 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 PRR12Q9ULL5 1215 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 PCDHA1Q9Y5I3 950 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 DOCK1Q14185 1865 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 PLA2G6O60733 806 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 PTPREP23469 700 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 EPHX2P34913 555 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 DEKP35659 375 aaKnown RBP14.06□□□□□ -0.16
CBWD1-220ENST00000612045 SULF1Q8IWU6 871 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 CHURC1Q8WUH1 139 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 KIAA1683Q9H0B3 1180 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 CLSTN2Q9H4D0 955 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 PICK1Q9NRD5 415 aa14.06□□□□□ -0.16
CBWD1-220ENST00000612045 FBXO2Q9UK22 296 aaPredicted RBP14.06□□□□□ -0.16
CBWD1-220ENST00000612045 SRPRBQ9Y5M8 271 aaKnown RBP14.06□□□□□ -0.16
CBWD1-220ENST00000612045 ADM5C9JUS6 153 aa14.05□□□□□ -0.16
CBWD1-220ENST00000612045 NDUFA8P51970 172 aa14.05□□□□□ -0.16
CBWD1-220ENST00000612045 SNAP25P60880 206 aa14.05□□□□□ -0.16
CBWD1-220ENST00000612045 CAMK4Q16566 473 aa14.05□□□□□ -0.16
CBWD1-220ENST00000612045 INF2Q27J81 1249 aa14.05□□□□□ -0.16
CBWD1-220ENST00000612045 RESP18Q5W5W9 173 aa14.05□□□□□ -0.16
CBWD1-220ENST00000612045 SHC4Q6S5L8 630 aa14.05□□□□□ -0.16
CBWD1-220ENST00000612045 FMR1NBQ8N0W7 255 aaPredicted RBP14.05□□□□□ -0.16
CBWD1-220ENST00000612045 LPAR1Q92633 364 aa14.05□□□□□ -0.16
CBWD1-220ENST00000612045 CUL5Q93034 780 aa14.05□□□□□ -0.16
CBWD1-220ENST00000612045 AMNQ9BXJ7 453 aa14.05□□□□□ -0.16
CBWD1-220ENST00000612045 BIN2Q9UBW5 565 aaPredicted RBP14.05□□□□□ -0.16
CBWD1-220ENST00000612045 PTPRAP18433 802 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 MRPL12P52815 198 aaKnown RBP14.04□□□□□ -0.16
CBWD1-220ENST00000612045 ATP2C1P98194 919 aaPredicted RBP14.04□□□□□ -0.16
CBWD1-220ENST00000612045 NONOQ15233 471 aaKnown RBP eCLIP14.04□□□□□ -0.16
CBWD1-220ENST00000612045 JAKMIP3Q5VZ66 844 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 DLK2Q6UY11 383 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 KRT26Q7Z3Y9 468 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 FAM160B2Q86V87 743 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 FBXO11Q86XK2 927 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 ZC3H15Q8WU90 426 aaKnown RBP14.04□□□□□ -0.16
CBWD1-220ENST00000612045 WDR18Q9BV38 432 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 GLT8D2Q9H1C3 349 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 TNMDQ9H2S6 317 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 PSTPIP2Q9H939 334 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 FEM1BQ9UK73 627 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 MRVI1Q9Y6F6 885 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 FAM237AA0A1B0GTK4 181 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 KINO60870 393 aaKnown RBP14.04□□□□□ -0.16
CBWD1-220ENST00000612045 USP2O75604 605 aaPredicted RBP14.04□□□□□ -0.16
CBWD1-220ENST00000612045 PFKFB1P16118 471 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 MCM7P33993 719 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 GRIN1Q05586 938 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 PTGDRQ13258 359 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 MTMR2Q13614 643 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 ZNF579Q8NAF0 562 aaKnown RBP14.04□□□□□ -0.16
CBWD1-220ENST00000612045 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.04□□□□□ -0.16
CBWD1-220ENST00000612045 KIFC2Q96AC6 838 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 AS3MTQ9HBK9 375 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 TMEM260Q9NX78 707 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 HPSEQ9Y251 543 aa14.04□□□□□ -0.16
CBWD1-220ENST00000612045 WDR46O15213 610 aaKnown RBP14.03□□□□□ -0.16
CBWD1-220ENST00000612045 CLK2P49760 499 aaKnown RBP14.03□□□□□ -0.16
CBWD1-220ENST00000612045 USP14P54578 494 aa14.03□□□□□ -0.16
CBWD1-220ENST00000612045 SPP2Q13103 211 aa14.03□□□□□ -0.16
CBWD1-220ENST00000612045 PRKG1Q13976 671 aa14.03□□□□□ -0.16
CBWD1-220ENST00000612045 MAP3K11Q16584 847 aa14.03□□□□□ -0.16
CBWD1-220ENST00000612045 NOL9Q5SY16 702 aaKnown RBP14.03□□□□□ -0.16
CBWD1-220ENST00000612045 ZNF280CQ8ND82 737 aa14.03□□□□□ -0.16
CBWD1-220ENST00000612045 TBCKQ8TEA7 893 aa14.03□□□□□ -0.16
CBWD1-220ENST00000612045 FERMT2Q96AC1 680 aa14.03□□□□□ -0.16
CBWD1-220ENST00000612045 RANBP17Q9H2T7 1088 aaKnown RBP14.03□□□□□ -0.16
CBWD1-220ENST00000612045 EMILIN3Q9NT22 766 aa14.03□□□□□ -0.16
CBWD1-220ENST00000612045 FBXO28Q9NVF7 368 aa14.03□□□□□ -0.16
CBWD1-220ENST00000612045 SCN4AP35499 1836 aa14.02□□□□□ -0.16
CBWD1-220ENST00000612045 IQCA1LA6NCM1 817 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms