RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 DSG2Q14126 1118 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 PFKFB3Q16875 520 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-213ENST00000611963 ASPRV1Q53RT3 343 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 KCTD1Q719H9 257 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 ZNF710Q8N1W2 664 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 DCAF4Q8WV16 495 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 GPKOWQ92917 476 aaPredicted RBP eCLIP9.34□□□□□ -0.91
TARDBP-213ENST00000611963 MKL1Q969V6 931 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 NUP88Q99567 741 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-213ENST00000611963 LZTS2Q9BRK4 669 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 SPZ1Q9BXG8 430 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 ZSCAN16Q9H4T2 348 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-213ENST00000611963 ARHGEF10LQ9HCE6 1279 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 VAT1LQ9HCJ6 419 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 LMBRD1Q9NUN5 540 aa9.34□□□□□ -0.91
TARDBP-213ENST00000611963 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.34□□□□□ -0.91
TARDBP-213ENST00000611963 PTPRFP10586 1907 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 NDUFB10O96000 172 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 MMP1P03956 469 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 SLC10A3P09131 477 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 SLC16A2P36021 539 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 ZNF157P51786 506 aaPredicted RBP9.33□□□□□ -0.92
TARDBP-213ENST00000611963 FKBP1BP68106 108 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 KRT85P78386 507 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 ZYXQ15942 572 aaKnown RBP9.33□□□□□ -0.92
TARDBP-213ENST00000611963 TPRNQ4KMQ1 711 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 ARSIQ5FYB1 569 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 KIAA1755Q5JYT7 1200 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 DCAF15Q66K64 600 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 HOMER1Q86YM7 354 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 RASAL3Q86YV0 1011 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 TNS4Q8IZW8 715 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 OXER1Q8TDS5 423 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 ANP32EQ9BTT0 268 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 ZNF341Q9BYN7 854 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 FTOQ9C0B1 505 aaKnown RBP eCLIP9.33□□□□□ -0.92
TARDBP-213ENST00000611963 TFIP11Q9UBB9 837 aaKnown RBP9.33□□□□□ -0.92
TARDBP-213ENST00000611963 TSKSQ9UJT2 592 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 PPP2R3BQ9Y5P8 575 aa9.33□□□□□ -0.92
TARDBP-213ENST00000611963 POTEB3A0JP26 581 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 BTBD18B2RXH4 712 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 F5H6K3 240 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 ADAMTS3O15072 1205 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 GADD45BO75293 160 aaPredicted RBP9.32□□□□□ -0.92
TARDBP-213ENST00000611963 ASNSP08243 561 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 SLC1A4P43007 532 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 CEBPZQ03701 1054 aaKnown RBP9.32□□□□□ -0.92
TARDBP-213ENST00000611963 KLRC3Q07444 240 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 NR5A1Q13285 461 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 GNL2Q13823 731 aaKnown RBP9.32□□□□□ -0.92
TARDBP-213ENST00000611963 PRKG1Q13976 671 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 SAFBQ15424 915 aaKnown RBP eCLIP9.32□□□□□ -0.92
TARDBP-213ENST00000611963 WWC2Q6AWC2 1192 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 TYW1BQ6NUM6 668 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 POTEBQ6S5H4 581 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 HEATR3Q7Z4Q2 680 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 PLPP6Q8IY26 295 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 DIS3L2Q8IYB7 885 aaKnown RBP9.32□□□□□ -0.92
TARDBP-213ENST00000611963 SPICE1Q8N0Z3 855 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 TMEM87AQ8NBN3 555 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 GMCL1P1Q8NEA9 526 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 CCDC102AQ96A19 550 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 RRP36Q96EU6 259 aaKnown RBP9.32□□□□□ -0.92
TARDBP-213ENST00000611963 PIGSQ96S52 555 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 WRNIP1Q96S55 665 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 RIOX1Q9H6W3 641 aa9.32□□□□□ -0.92
TARDBP-213ENST00000611963 RBM27Q9P2N5 1060 aaKnown RBP9.32□□□□□ -0.92
TARDBP-213ENST00000611963 PARP14Q460N5 1801 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 MYH7BA7E2Y1 1941 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 FAM205CA6NFA0 338 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 USP17L10C9JJH3 530 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 STXBP3O00186 592 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 TRAK2O60296 914 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 CTNND1O60716 968 aaKnown RBP9.31□□□□□ -0.92
TARDBP-213ENST00000611963 XBP1P17861 261 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 PTMSP20962 102 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 KRT2P35908 639 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 SNAP25P60880 206 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 NPY5RQ15761 445 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 NOM1Q5C9Z4 860 aaKnown RBP9.31□□□□□ -0.92
TARDBP-213ENST00000611963 GPATCH4Q5T3I0 446 aaKnown RBP9.31□□□□□ -0.92
TARDBP-213ENST00000611963 LDLRAD1Q5T700 205 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 MYSM1Q5VVJ2 828 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 BRAPQ7Z569 592 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 ADGRF4Q8IZF3 695 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 RGS22Q8NE09 1264 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 LEO1Q8WVC0 666 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-213ENST00000611963 ZKSCAN4Q969J2 545 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-213ENST00000611963 HOOK2Q96ED9 719 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 GMCL1Q96IK5 515 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 ZNF396Q96N95 335 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-213ENST00000611963 USP28Q96RU2 1077 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 FEZ1Q99689 392 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 PHF20Q9BVI0 1012 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 JMJD4Q9H9V9 463 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 GOPCQ9HD26 462 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 SEC63Q9UGP8 760 aaKnown RBP9.31□□□□□ -0.92
TARDBP-213ENST00000611963 ZNF112Q9UJU3 913 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 TMX2Q9Y320 296 aa9.31□□□□□ -0.92
TARDBP-213ENST00000611963 BMP3P12645 472 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms