RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 CDK8P49336 464 aa19.41■□□□□ 0.7
NEK3-206ENST00000611833 TEX35Q5T0J7 233 aa19.41■□□□□ 0.7
NEK3-206ENST00000611833 LZTS2Q9BRK4 669 aa19.41■□□□□ 0.7
NEK3-206ENST00000611833 KLRF2D3W0D1 207 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 H7C1D1 291 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 NAALADL2Q58DX5 795 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 C16orf86Q6ZW13 317 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 TMTC1Q8IUR5 882 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 EYA3Q99504 573 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 PLIN2Q99541 437 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 FHOD1Q9Y613 1164 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 ATP2B4P23634 1241 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 UBXN1Q04323 297 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 TRIM14Q14142 442 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 TEX11Q8IYF3 940 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 GPR161Q8N6U8 529 aaKnown RBP19.4■□□□□ 0.7
NEK3-206ENST00000611833 ABHD10Q9NUJ1 306 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 GGA1Q9UJY5 639 aa19.4■□□□□ 0.7
NEK3-206ENST00000611833 FLT1P17948 1338 aa19.39■□□□□ 0.7
NEK3-206ENST00000611833 A0A0U1RQJ8 604 aa19.39■□□□□ 0.69
NEK3-206ENST00000611833 LAD1O00515 517 aa19.39■□□□□ 0.69
NEK3-206ENST00000611833 GYS1P13807 737 aa19.39■□□□□ 0.69
NEK3-206ENST00000611833 ZNF771Q7L3S4 317 aaPredicted RBP19.39■□□□□ 0.69
NEK3-206ENST00000611833 ATRIPQ8WXE1 791 aa19.39■□□□□ 0.69
NEK3-206ENST00000611833 EPC1Q9H2F5 836 aa19.39■□□□□ 0.69
NEK3-206ENST00000611833 PNMA6AP0CW24 399 aaPredicted RBP19.39■□□□□ 0.69
NEK3-206ENST00000611833 ADRA2BP18089 450 aa19.39■□□□□ 0.69
NEK3-206ENST00000611833 NAPAP54920 295 aa19.39■□□□□ 0.69
NEK3-206ENST00000611833 STIM1Q13586 685 aa19.39■□□□□ 0.69
NEK3-206ENST00000611833 CERS3Q8IU89 383 aa19.39■□□□□ 0.69
NEK3-206ENST00000611833 ADSSL1Q8N142 457 aa19.39■□□□□ 0.69
NEK3-206ENST00000611833 GJD4Q96KN9 370 aaPredicted RBP19.39■□□□□ 0.69
NEK3-206ENST00000611833 TTF2Q9UNY4 1162 aaKnown RBP19.39■□□□□ 0.69
NEK3-206ENST00000611833 TRIM49BA6NDI0 452 aa19.38■□□□□ 0.69
NEK3-206ENST00000611833 SERPINB2P05120 415 aa19.38■□□□□ 0.69
NEK3-206ENST00000611833 PARP1P09874 1014 aaKnown RBP19.38■□□□□ 0.69
NEK3-206ENST00000611833 RHBDL3P58872 404 aa19.38■□□□□ 0.69
NEK3-206ENST00000611833 ZNF569Q5MCW4 686 aa19.38■□□□□ 0.69
NEK3-206ENST00000611833 MFSD14BQ5SR56 506 aa19.38■□□□□ 0.69
NEK3-206ENST00000611833 CYP26C1Q6V0L0 522 aa19.38■□□□□ 0.69
NEK3-206ENST00000611833 NEDD1Q8NHV4 660 aa19.38■□□□□ 0.69
NEK3-206ENST00000611833 GOLGA1Q92805 767 aa19.38■□□□□ 0.69
NEK3-206ENST00000611833 SPZ1Q9BXG8 430 aa19.38■□□□□ 0.69
NEK3-206ENST00000611833 CCSER1Q9C0I3 900 aa19.38■□□□□ 0.69
NEK3-206ENST00000611833 UBR3Q6ZT12 1888 aa19.38■□□□□ 0.69
NEK3-206ENST00000611833 PES1O00541 588 aaKnown RBP19.37■□□□□ 0.69
NEK3-206ENST00000611833 MYL1P05976 194 aa19.37■□□□□ 0.69
NEK3-206ENST00000611833 FECHP22830 423 aa19.37■□□□□ 0.69
NEK3-206ENST00000611833 KCNB1Q14721 858 aa19.37■□□□□ 0.69
NEK3-206ENST00000611833 RSRC2Q7L4I2 434 aaKnown RBP19.37■□□□□ 0.69
NEK3-206ENST00000611833 ACRBPQ8NEB7 543 aa19.37■□□□□ 0.69
NEK3-206ENST00000611833 ZMYND12Q9H0C1 365 aa19.37■□□□□ 0.69
NEK3-206ENST00000611833 POLLQ9UGP5 575 aa19.37■□□□□ 0.69
NEK3-206ENST00000611833 ZRANB2O95218 330 aaKnown RBP eCLIP19.37■□□□□ 0.69
NEK3-206ENST00000611833 KRT9P35527 623 aa19.37■□□□□ 0.69
NEK3-206ENST00000611833 PRPHP41219 470 aa19.37■□□□□ 0.69
NEK3-206ENST00000611833 ERVK-24P63145 666 aa19.37■□□□□ 0.69
NEK3-206ENST00000611833 ST5P78524 1137 aa19.37■□□□□ 0.69
NEK3-206ENST00000611833 USP17L2Q6R6M4 530 aa19.37■□□□□ 0.69
NEK3-206ENST00000611833 EP400Q96L91 3159 aa19.37■□□□□ 0.69
NEK3-206ENST00000611833 RNF225M0QZC1 329 aaPredicted RBP19.36■□□□□ 0.69
NEK3-206ENST00000611833 RABGGTAQ92696 567 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 CEP95Q96GE4 821 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 RBM17Q96I25 401 aaKnown RBP19.36■□□□□ 0.69
NEK3-206ENST00000611833 MYH1P12882 1939 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 PSMA7O14818 248 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 CCNT1O60563 726 aaKnown RBP19.36■□□□□ 0.69
NEK3-206ENST00000611833 KIF20AO95235 890 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 TERF2Q15554 542 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 KIF4BQ2VIQ3 1234 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 LETM2Q2VYF4 491 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 KRT25Q7Z3Z0 450 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 TBC1D16Q8TBP0 767 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 LRRC15Q8TF66 581 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 FAM163AQ96GL9 167 aaPredicted RBP19.36■□□□□ 0.69
NEK3-206ENST00000611833 TRIM47Q96LD4 638 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 C6orf50Q9HD87 102 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 KBTBD4Q9NVX7 518 aa19.36■□□□□ 0.69
NEK3-206ENST00000611833 SMCO2A6NFE2 343 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 SEC31AO94979 1220 aaKnown RBP19.35■□□□□ 0.69
NEK3-206ENST00000611833 PLCG2P16885 1265 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 NONOQ15233 471 aaKnown RBP eCLIP19.35■□□□□ 0.69
NEK3-206ENST00000611833 SOGA3Q5TF21 947 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 IRF2BP1Q8IU81 584 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 RRP36Q96EU6 259 aaKnown RBP19.35■□□□□ 0.69
NEK3-206ENST00000611833 ZSWIM4Q9H7M6 989 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 ST7Q9NRC1 585 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 MAGEC2Q9UBF1 373 aaPredicted RBP19.35■□□□□ 0.69
NEK3-206ENST00000611833 SEC63Q9UGP8 760 aaKnown RBP19.35■□□□□ 0.69
NEK3-206ENST00000611833 GAKO14976 1311 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 CTAGE9A4FU28 777 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 KLRC4O43908 158 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 RHOBTB3O94955 611 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 OR52Z1P0C646 297 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 GNA11P29992 359 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 PMS1P54277 932 aaKnown RBP19.35■□□□□ 0.69
NEK3-206ENST00000611833 CABP7Q86V35 215 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 VAT1LQ9HCJ6 419 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 PODXL2Q9NZ53 605 aa19.35■□□□□ 0.69
NEK3-206ENST00000611833 SPATA31A6Q5VVP1 1343 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms