RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 PABPC4Q13310 644 aaKnown RBP eCLIP18.46■□□□□ 0.55
CLTCL1-207ENST00000611723 TREML2Q5T2D2 321 aa18.46■□□□□ 0.55
CLTCL1-207ENST00000611723 FAM177A1Q8N128 213 aaPredicted RBP18.46■□□□□ 0.55
CLTCL1-207ENST00000611723 ALG1Q9BT22 464 aa18.46■□□□□ 0.55
CLTCL1-207ENST00000611723 TANGO6Q9C0B7 1094 aa18.46■□□□□ 0.55
CLTCL1-207ENST00000611723 RANBP17Q9H2T7 1088 aaKnown RBP18.46■□□□□ 0.55
CLTCL1-207ENST00000611723 FBXO28Q9NVF7 368 aa18.46■□□□□ 0.55
CLTCL1-207ENST00000611723 CIZ1Q9ULV3 898 aaPredicted RBP18.46■□□□□ 0.55
CLTCL1-207ENST00000611723 PDE4DIPQ5VU43 2346 aa18.46■□□□□ 0.55
CLTCL1-207ENST00000611723 hCG_1984214I3L0E3 225 aa18.45■□□□□ 0.54
CLTCL1-207ENST00000611723 CA12O43570 354 aa18.45■□□□□ 0.54
CLTCL1-207ENST00000611723 FLOT1O75955 427 aa18.45■□□□□ 0.54
CLTCL1-207ENST00000611723 LARP1BQ659C4 914 aaKnown RBP18.45■□□□□ 0.54
CLTCL1-207ENST00000611723 ZNF713Q8N859 430 aaPredicted RBP18.45■□□□□ 0.54
CLTCL1-207ENST00000611723 KIFC2Q96AC6 838 aa18.45■□□□□ 0.54
CLTCL1-207ENST00000611723 SH3GLB2Q9NR46 395 aa18.45■□□□□ 0.54
CLTCL1-207ENST00000611723 SEC63Q9UGP8 760 aaKnown RBP18.45■□□□□ 0.54
CLTCL1-207ENST00000611723 CCL15-CCL14A0A0B4J2E2 113 aa18.44■□□□□ 0.54
CLTCL1-207ENST00000611723 hCG_1642624A0A1W2PR95 340 aa18.44■□□□□ 0.54
CLTCL1-207ENST00000611723 MANSC4A6NHS7 340 aaPredicted RBP18.44■□□□□ 0.54
CLTCL1-207ENST00000611723 SYT1P21579 422 aa18.44■□□□□ 0.54
CLTCL1-207ENST00000611723 SOX10P56693 466 aa18.44■□□□□ 0.54
CLTCL1-207ENST00000611723 INHBEP58166 350 aa18.44■□□□□ 0.54
CLTCL1-207ENST00000611723 CDC37Q16543 378 aaPredicted RBP18.44■□□□□ 0.54
CLTCL1-207ENST00000611723 CCL15Q16663 113 aa18.44■□□□□ 0.54
CLTCL1-207ENST00000611723 QRICH1Q2TAL8 776 aa18.44■□□□□ 0.54
CLTCL1-207ENST00000611723 ANKRD23Q86SG2 305 aa18.44■□□□□ 0.54
CLTCL1-207ENST00000611723 BRI3BPQ8WY22 251 aa18.44■□□□□ 0.54
CLTCL1-207ENST00000611723 SLC38A10Q9HBR0 1119 aa18.44■□□□□ 0.54
CLTCL1-207ENST00000611723 MYH6P13533 1939 aa18.43■□□□□ 0.54
CLTCL1-207ENST00000611723 RLFQ13129 1914 aa18.43■□□□□ 0.54
CLTCL1-207ENST00000611723 LBX2Q6XYB7 198 aa18.43■□□□□ 0.54
CLTCL1-207ENST00000611723 HOMER1Q86YM7 354 aa18.43■□□□□ 0.54
CLTCL1-207ENST00000611723 FBXO18Q8NFZ0 1043 aa18.43■□□□□ 0.54
CLTCL1-207ENST00000611723 PIBF1Q8WXW3 757 aa18.43■□□□□ 0.54
CLTCL1-207ENST00000611723 C8orf76Q96K31 380 aa18.43■□□□□ 0.54
CLTCL1-207ENST00000611723 AIFM3Q96NN9 605 aa18.43■□□□□ 0.54
CLTCL1-207ENST00000611723 BARHL2Q9NY43 387 aa18.43■□□□□ 0.54
CLTCL1-207ENST00000611723 PCDH10Q9P2E7 1040 aa18.43■□□□□ 0.54
CLTCL1-207ENST00000611723 PNMA2Q9UL42 364 aa18.43■□□□□ 0.54
CLTCL1-207ENST00000611723 BTBD19C9JJ37 291 aa18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 VWA5AO00534 786 aa18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 PPP1R11O60927 126 aaPredicted RBP18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 ZBED4O75132 1171 aa18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 XBP1P17861 261 aa18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 OSBPP22059 807 aa18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 MKRN3Q13064 507 aaKnown RBP18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 TRAF1Q13077 416 aa18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 WWC2Q6AWC2 1192 aa18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 REPS2Q8NFH8 660 aa18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 ATG4CQ96DT6 458 aa18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 P2RX7Q99572 595 aaKnown RBP18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 AMNQ9BXJ7 453 aa18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 ASCC2Q9H1I8 757 aaPredicted RBP18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 ZCCHC17Q9NP64 241 aaKnown RBP18.42■□□□□ 0.54
CLTCL1-207ENST00000611723 SPDYE16A6NNV3 312 aaPredicted RBP18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 STXBP3O00186 592 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 ATP2A1O14983 1001 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 STX6O43752 255 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 OAZ1P54368 228 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 NUCB2P80303 420 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 FBXO11Q86XK2 927 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 MB21D1Q8N884 522 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 SHISA4Q96DD7 197 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 PTPN18Q99952 460 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 CHMP5Q9NZZ3 219 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 PNMA3Q9UL41 463 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 MTMR6Q9Y217 621 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 PARP14Q460N5 1801 aa18.41■□□□□ 0.54
CLTCL1-207ENST00000611723 SNAP25P60880 206 aa18.4■□□□□ 0.54
CLTCL1-207ENST00000611723 IRX3P78415 501 aaPredicted RBP18.4■□□□□ 0.54
CLTCL1-207ENST00000611723 NOGQ13253 232 aa18.4■□□□□ 0.54
CLTCL1-207ENST00000611723 KRT40Q6A162 431 aa18.4■□□□□ 0.54
CLTCL1-207ENST00000611723 TYW1BQ6NUM6 668 aa18.4■□□□□ 0.54
CLTCL1-207ENST00000611723 PPP1R18Q6NYC8 613 aa18.4■□□□□ 0.54
CLTCL1-207ENST00000611723 GTF3C2Q8WUA4 911 aaPredicted RBP18.4■□□□□ 0.54
CLTCL1-207ENST00000611723 CCDC12Q8WUD4 166 aaPredicted RBP18.4■□□□□ 0.54
CLTCL1-207ENST00000611723 VPS54Q9P1Q0 977 aa18.4■□□□□ 0.54
CLTCL1-207ENST00000611723 ZNF536O15090 1300 aa18.4■□□□□ 0.54
CLTCL1-207ENST00000611723 ESYT2A0FGR8 921 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 H3BQV1 296 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 PDHXO00330 501 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 BRD1O95696 1058 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 ICAM1P05362 532 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 TM4SF4P48230 202 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 TRIM29Q14134 588 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 GALNT17Q6IS24 598 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 POTEEQ6S8J3 1075 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 HEATR3Q7Z4Q2 680 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 TEX2Q8IWB9 1127 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 CCDC148Q8NFR7 591 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 GPKOWQ92917 476 aaPredicted RBP eCLIP18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 COA7Q96BR5 231 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 PHF20Q9BVI0 1012 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 ZMYND12Q9H0C1 365 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 GJB4Q9NTQ9 266 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 PCDHA1Q9Y5I3 950 aa18.39■□□□□ 0.53
CLTCL1-207ENST00000611723 HERVK_113P62684 666 aa18.38■□□□□ 0.53
CLTCL1-207ENST00000611723 OTUD7BQ6GQQ9 843 aa18.38■□□□□ 0.53
CLTCL1-207ENST00000611723 REM2Q8IYK8 340 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms