RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 DAGLAQ9Y4D2 1042 aa13.3□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 KCNJ18B7U540 433 aa13.3□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ABL1P00519 1130 aa13.3□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 TECP42680 631 aa13.3□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 KCNJ12Q14500 433 aa13.3□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 TCP11X2Q5H9J9 407 aa13.3□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 IRF2BP1Q8IU81 584 aa13.3□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PES1O00541 588 aaKnown RBP13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 MFAP3LO75121 409 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 BBOX1O75936 387 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ADRA2BP18089 450 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PLCG1P19174 1290 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CASQ1P31415 396 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 SCNN1DP51172 638 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 COPB1P53618 953 aaKnown RBP13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 DAGLBQ8NCG7 672 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 COA7Q96BR5 231 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 RRP36Q96EU6 259 aaKnown RBP13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PANX2Q96RD6 677 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 SPZ1Q9BXG8 430 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ZNF446Q9NWS9 450 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 DDX41Q9UJV9 622 aaKnown RBP13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ADGRG1Q9Y653 693 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 DOK7Q18PE1 504 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 MNS1Q8NEH6 495 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 TBCKQ8TEA7 893 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 DDX4Q9NQI0 724 aaKnown RBP13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 THSD7AQ9UPZ6 1657 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 LY75O60449 1722 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 LRRC10BA6NIK2 292 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 POLRMTO00411 1230 aaKnown RBP13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 KLRC4O43908 158 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 TUBB4AP04350 444 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 AKR1B1P15121 316 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ADSSL1Q8N142 457 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CERS5Q8N5B7 392 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 HPS3Q969F9 1004 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 FEZ1Q99689 392 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PYM1Q9BRP8 204 aaKnown RBP13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 SEC63Q9UGP8 760 aaKnown RBP13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 LIMA1Q9UHB6 759 aaKnown RBP13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 NAV1Q8NEY1 1877 aa13.29□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ZBTB22O15209 634 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CCDC175P0C221 793 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PLCG2P16885 1265 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ZSCAN20P17040 1043 aaPredicted RBP13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 UBXN1Q04323 297 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 NONOQ15233 471 aaKnown RBP eCLIP13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ACRBPQ8NEB7 543 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 UBXN4Q92575 508 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 NUP88Q99567 741 aaPredicted RBP13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 GPCPD1Q9NPB8 672 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 KBTBD4Q9NVX7 518 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 RMND1Q9NWS8 449 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 MYH8P13535 1937 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 OR52Z1P0C646 297 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PDHBP11177 359 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 GALNT17Q6IS24 598 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 DPP8Q6V1X1 898 aaPredicted RBP13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CABP7Q86V35 215 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 POTEDQ86YR6 584 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 KIFC2Q96AC6 838 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 FAM163AQ96GL9 167 aaPredicted RBP13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 LZTS2Q9BRK4 669 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 SRRTQ9BXP5 876 aaKnown RBP13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ZSWIM4Q9H7M6 989 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 C6orf50Q9HD87 102 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 PODXL2Q9NZ53 605 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 OGFRQ9NZT2 677 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 DDX60LQ5H9U9 1706 aaKnown RBP13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 UTRNP46939 3433 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CDK5RAP2Q96SN8 1893 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 GAKO14976 1311 aa13.28□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 TXKP42681 527 aa13.27□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 ERVK-24P63145 666 aa13.27□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 SOGA3Q5TF21 947 aa13.27□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 NEK8Q86SG6 692 aa13.27□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CCDC12Q8WUD4 166 aaPredicted RBP13.27□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 UIMC1Q96RL1 719 aa13.27□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 CCSER1Q9C0I3 900 aa13.27□□□□□ -0.28
HMGN3-AS1-201ENST00000604516 TFRCP02786 760 aaKnown RBP13.27□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 HOXA10P31260 410 aaPredicted RBP13.27□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 ATP2B2Q01814 1243 aa13.27□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 MTMR4Q9NYA4 1195 aa13.27□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 TTF2Q9UNY4 1162 aaKnown RBP13.27□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 SPATA31A6Q5VVP1 1343 aa13.27□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 NKRFO15226 690 aaKnown RBP eCLIP13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 TADA3O75528 432 aa13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 FCER1AP12319 257 aa13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 GNA11P29992 359 aa13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 CLCN6P51797 869 aa13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 STK4Q13043 487 aa13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 KRT25Q7Z3Z0 450 aa13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 REXO1Q8N1G1 1221 aaKnown RBP13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 PROM2Q8N271 834 aa13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 TBC1D22AQ8WUA7 517 aa13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 MYH1P12882 1939 aa13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 PPEF1O14829 653 aaPredicted RBP13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 ONECUT3O60422 494 aaPredicted RBP13.26□□□□□ -0.29
HMGN3-AS1-201ENST00000604516 H2AFXP16104 143 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms